| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115352878
Identifier: 115352878
GI number: 115352878
Start: 3117363
End: 3117584
Strand: Direct
Name: 115352878
Synonym: Bamb_2827
Alternate gene names: NA
Gene position: 3117363-3117584 (Clockwise)
Preceding gene: 115352872
Following gene: 115352879
Centisome position: 87.65
GC content: 64.86
Gene sequence:
>222_bases GTGTACCCCGTATTTTCGTTTCTGATGGACATGCTGCCGGGCCGCAGCAAGGCGACGTTCGCGCCCGCGGCCAAAGTGAA CCGCGTCACGTTCACGGGCACGGTCGACCGCAGCGACGGTGTGGTCCTGTCGGTCCACGGTAGCGACGCGTTGGTGCGCT GGCCGAAGGGCGGAAAGTCGGTTGAGCGCGTCAGCAACCTGGTCGCGATCACGGAAGCGTAA
Upstream 100 bases:
>100_bases GCGGCACGCCCTCAACGCACGAGGCCGAAATGTTGCAGTGCCGCATGCGCGGTGCTAAACTAGGGGAAAACCCTTAGTTC AAGCTCGCGAAGGAGCAATC
Downstream 100 bases:
>100_bases TTCGCTGGTTCTCCGGGCCCGTTCGGCGTGCACGCGCGACGCCATCGCATTGATGGCTCCGCCGAAGGCCGTGGTCGATG CCATCGGCACGTCCCGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 73; Mature: 73
Protein sequence:
>73_residues MYPVFSFLMDMLPGRSKATFAPAAKVNRVTFTGTVDRSDGVVLSVHGSDALVRWPKGGKSVERVSNLVAITEA
Sequences:
>Translated_73_residues MYPVFSFLMDMLPGRSKATFAPAAKVNRVTFTGTVDRSDGVVLSVHGSDALVRWPKGGKSVERVSNLVAITEA >Mature_73_residues MYPVFSFLMDMLPGRSKATFAPAAKVNRVTFTGTVDRSDGVVLSVHGSDALVRWPKGGKSVERVSNLVAITEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7840; Mature: 7840
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYPVFSFLMDMLPGRSKATFAPAAKVNRVTFTGTVDRSDGVVLSVHGSDALVRWPKGGKS CCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCEEEECCCCCCH VERVSNLVAITEA HHHHHHEEEEECC >Mature Secondary Structure MYPVFSFLMDMLPGRSKATFAPAAKVNRVTFTGTVDRSDGVVLSVHGSDALVRWPKGGKS CCCHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCEEEECCCCCCH VERVSNLVAITEA HHHHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA