Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352741

Identifier: 115352741

GI number: 115352741

Start: 2963506

End: 2964714

Strand: Direct

Name: 115352741

Synonym: Bamb_2690

Alternate gene names: NA

Gene position: 2963506-2964714 (Clockwise)

Preceding gene: 115352740

Following gene: 115352751

Centisome position: 83.33

GC content: 70.22

Gene sequence:

>1209_bases
ATGAAAAAAGCGCTGCATCGCGCCGCATTCGTACTGTGCGCTGCCGCGGCGGCCACCGCCTCCGCCGCCAGCCCCTGCCC
CGCCGCCGACACCGCCGCACGCGCGGCGCTCGACGCGCAGCACCGCGTACAGCAAGTCCGTAATCCGCAAGGCGACGGCG
GCGGTACCGTCGACGTCTCGCCGCTCTTGCGCGACGCGCTTCGCGCATACAAGCAGGCGCTCGTCGGCGCGATCGACGCG
CGGCTTGCGTGCAGCGACGAACACGTCGAGCCGGCTGCGCTGAAACGCACGCTTGCGGCCACGCTCGGCGTACCCGCCCA
ATCCACCCAATCCGCCGAGCCGAAAAACGGCGAATCGGCATTCGGCCGCAACCCGGACGTCGACGTTCAACGCGACGGCA
CGTCCCGCCCGCTCCTCTTCGTGCGCGCCGGCTTCGACATCCCATGCGGCGACGACAACCTGCTCACGGCCTATGCGTGG
GAAAACGGCGGCTGGCGACGCGTGCTGCGCTGGCAGGCCGACGACTACAAGGACATCGGCGGCGCCTACGGCGGCGGCTT
CTGGTTCGGCGCATTGCCCGGCGGCCAGGTGGCGATCGTCCACGGCACGCCGTGGTGCTCGTCGCGCTGGAGCCGGTTCG
GCGCGGACGTGGTCGCGCCGGCAAACGGCGCGGCCGCGCAACGCACGCTGTTCCATACGGCTCACGGCTACGTGATCGAC
GACGACGCGATCCGCTTCAAGGTGCGCCCCGATGGCTTCGAGCTGCGCACGACGGTCGGCTCGCGCGACAGCGACGTGAT
GACACGGCCGGGCATCTTCCGCTATCGCGTCGACGGCGACACCGTGCAACGCGTGCAGCCGGTCGCGGTCAACGGCCGCG
ATTTCGTCGACGAATGGCTGGGCGTGGACGATGCGCTCGCGGGCGCCTGGAGCGAACCCGCGGCCGCTGGGGCGGCGCTG
CAAGCGCGGCAGGGATTCATTGCGGAAAGCAAGGCGCCCGATACCGGGTTCGCCTATGGACCGGTACGCGGCTGCTCGGA
CAGCAAGGATCGCTTCCAGGTCGAACTGGATTTGACGGGCAAGGACGGCAACACGGTTGCGCGACGCTACGCGCTGATCC
GCCAGGAGCGCAACGGGTTCACGATGCTCGGGCTGCGCAAGGCGGCCGAGCCGGCGTGCCACGGCGCGAACCTGATGCCG
CGGCACTGA

Upstream 100 bases:

>100_bases
CTCGCTGCTCGATGAAAGACTGAAGAAGCTGTCATTCCCCATCCGACATTCCCCCGCCTCACAAGACTGAATCCCCTCGC
TACATCCGGAGACCTATTCG

Downstream 100 bases:

>100_bases
ACGTCGGCGGCACGGCGGCGCCGGACAGGAATCGACGGCAAGCGGCACGCGCGACGCGGCGTGCCCGGCCGCCCGTCATT
GCGCGCGTCGCGGCTCGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MKKALHRAAFVLCAAAAATASAASPCPAADTAARAALDAQHRVQQVRNPQGDGGGTVDVSPLLRDALRAYKQALVGAIDA
RLACSDEHVEPAALKRTLAATLGVPAQSTQSAEPKNGESAFGRNPDVDVQRDGTSRPLLFVRAGFDIPCGDDNLLTAYAW
ENGGWRRVLRWQADDYKDIGGAYGGGFWFGALPGGQVAIVHGTPWCSSRWSRFGADVVAPANGAAAQRTLFHTAHGYVID
DDAIRFKVRPDGFELRTTVGSRDSDVMTRPGIFRYRVDGDTVQRVQPVAVNGRDFVDEWLGVDDALAGAWSEPAAAGAAL
QARQGFIAESKAPDTGFAYGPVRGCSDSKDRFQVELDLTGKDGNTVARRYALIRQERNGFTMLGLRKAAEPACHGANLMP
RH

Sequences:

>Translated_402_residues
MKKALHRAAFVLCAAAAATASAASPCPAADTAARAALDAQHRVQQVRNPQGDGGGTVDVSPLLRDALRAYKQALVGAIDA
RLACSDEHVEPAALKRTLAATLGVPAQSTQSAEPKNGESAFGRNPDVDVQRDGTSRPLLFVRAGFDIPCGDDNLLTAYAW
ENGGWRRVLRWQADDYKDIGGAYGGGFWFGALPGGQVAIVHGTPWCSSRWSRFGADVVAPANGAAAQRTLFHTAHGYVID
DDAIRFKVRPDGFELRTTVGSRDSDVMTRPGIFRYRVDGDTVQRVQPVAVNGRDFVDEWLGVDDALAGAWSEPAAAGAAL
QARQGFIAESKAPDTGFAYGPVRGCSDSKDRFQVELDLTGKDGNTVARRYALIRQERNGFTMLGLRKAAEPACHGANLMP
RH
>Mature_402_residues
MKKALHRAAFVLCAAAAATASAASPCPAADTAARAALDAQHRVQQVRNPQGDGGGTVDVSPLLRDALRAYKQALVGAIDA
RLACSDEHVEPAALKRTLAATLGVPAQSTQSAEPKNGESAFGRNPDVDVQRDGTSRPLLFVRAGFDIPCGDDNLLTAYAW
ENGGWRRVLRWQADDYKDIGGAYGGGFWFGALPGGQVAIVHGTPWCSSRWSRFGADVVAPANGAAAQRTLFHTAHGYVID
DDAIRFKVRPDGFELRTTVGSRDSDVMTRPGIFRYRVDGDTVQRVQPVAVNGRDFVDEWLGVDDALAGAWSEPAAAGAAL
QARQGFIAESKAPDTGFAYGPVRGCSDSKDRFQVELDLTGKDGNTVARRYALIRQERNGFTMLGLRKAAEPACHGANLMP
RH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42944; Mature: 42944

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKALHRAAFVLCAAAAATASAASPCPAADTAARAALDAQHRVQQVRNPQGDGGGTVDVS
CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHH
PLLRDALRAYKQALVGAIDARLACSDEHVEPAALKRTLAATLGVPAQSTQSAEPKNGESA
HHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
FGRNPDVDVQRDGTSRPLLFVRAGFDIPCGDDNLLTAYAWENGGWRRVLRWQADDYKDIG
CCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCHHHHC
GAYGGGFWFGALPGGQVAIVHGTPWCSSRWSRFGADVVAPANGAAAQRTLFHTAHGYVID
CCCCCCEEEECCCCCCEEEEECCCCHHHHHHHCCCCEEECCCCCHHHHHHEEECCCEEEC
DDAIRFKVRPDGFELRTTVGSRDSDVMTRPGIFRYRVDGDTVQRVQPVAVNGRDFVDEWL
CCCEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEECCCHHHHCCCEEECCHHHHHHHC
GVDDALAGAWSEPAAAGAALQARQGFIAESKAPDTGFAYGPVRGCSDSKDRFQVELDLTG
CCCHHHHCCCCCCHHHCHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEEEEEC
KDGNTVARRYALIRQERNGFTMLGLRKAAEPACHGANLMPRH
CCCHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKALHRAAFVLCAAAAATASAASPCPAADTAARAALDAQHRVQQVRNPQGDGGGTVDVS
CCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEHH
PLLRDALRAYKQALVGAIDARLACSDEHVEPAALKRTLAATLGVPAQSTQSAEPKNGESA
HHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
FGRNPDVDVQRDGTSRPLLFVRAGFDIPCGDDNLLTAYAWENGGWRRVLRWQADDYKDIG
CCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEECCCCHHHHC
GAYGGGFWFGALPGGQVAIVHGTPWCSSRWSRFGADVVAPANGAAAQRTLFHTAHGYVID
CCCCCCEEEECCCCCCEEEEECCCCHHHHHHHCCCCEEECCCCCHHHHHHEEECCCEEEC
DDAIRFKVRPDGFELRTTVGSRDSDVMTRPGIFRYRVDGDTVQRVQPVAVNGRDFVDEWL
CCCEEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEECCCHHHHCCCEEECCHHHHHHHC
GVDDALAGAWSEPAAAGAALQARQGFIAESKAPDTGFAYGPVRGCSDSKDRFQVELDLTG
CCCHHHHCCCCCCHHHCHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEEEEEC
KDGNTVARRYALIRQERNGFTMLGLRKAAEPACHGANLMPRH
CCCHHHHHHHHHHHHCCCCEEEEEEHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA