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The map label for this gene is xylB [H]

Identifier: 115352685

GI number: 115352685

Start: 2899123

End: 2900604

Strand: Direct

Name: xylB [H]

Synonym: Bamb_2634

Alternate gene names: 115352685

Gene position: 2899123-2900604 (Clockwise)

Preceding gene: 115352684

Following gene: 115352686

Centisome position: 81.52

GC content: 72.74

Gene sequence:

>1482_bases
ATGTATCTCGGCATCGACCTCGGCACCTCGGAAGTGAAGGTGCTGCTGCTGGCCCCGGACGGCACCGTGGTCGGCACCGC
GGGCACGCCGTTCGGCGTGTCGCGGCCGCACCCGCGCTGGGCTGAACAGCATCCGGACGACTGGTGGCAAGGCACGCTCG
CCGCGCTCGCGGCGCTGCGCGAACGGCACCCCCAGGCGTTCGCGCAGGTGCGCGGGATCGGCCTGTCGGGCCAGATGCAC
GGCGCGGTGCTGCTCGGCCGCGACGATCGCGTGCTGCGCCCCGCGATCCTGTGGAACGACATGCGCAGCGCCGACGAATG
CGCGCTGCTCACCGAACGCGCACCCGATCTGCACGCGCTGGCCGGCAACCTCGCGATGCCCGGCTTCACCGCGCCGAAAC
TGCTGTGGGTCGCGAAGCACGAACCCGACGTGTTCGCCGCGACCGCGTGCGTGCTGATGCCGAAGGACTACCTGCGCTTC
CGGCTCACCGGCGCGAAGGTGTCCGACCCGTCCGACGCGGCCGGCACGCTGTGGCTCGACGTCGCGCGCCGCGACTGGTC
CGACGCGCTGCTCGCCGCGTGCGACATGACGCGCGAGCAGATGCCGCGCATCGTCGAAGGCAACGCGCCGTCCGGCACGC
TGCGTGCGGACGTCGCGCGCGAGCTCGGACTGTCGGAGGCTGTCGTGGTCGCGGGCGGCGGCGGCGACAACGCGACGAGC
GCGCTCGGCATCGGCGCGATCCACGCGGGCGACGGCTTCGTGTCGCTCGGCACGTCGGGCGTGCTGAGCGTGGTCGGCGA
CCGCTTCATGCCGAATCCCGCATCGGCCGTGCATGCGTTCTGTCACGCGATTCCCGATCGCTGGCAGCTGATGAGCGTCG
TGCTGTCGGCCGCGAGCTGCCTGCGCTGGGTCTGCATGCTGACCGGCACCGACGAGCCGGCGCTGCTCGCCGAAATCGAG
GCGCTCGACGCGGACGCGCTCGCCACCGCGCCGCTGTTCCTGCCCTACCTGTCCGGCGAACGCACGCCGCACAACGATCC
GTATGCGCAGGGCGTGTTCTTCGGGATGACGCACGCGACCGAACGCGCGCATCTCGGCTACGCGGTGCTCGAAGGCGTGA
CGCTCGGCCTCGCGGACGGCCTCGACGCGCTGCACACGGCCGGCGTCGAAACCGACCGGCTATCGCTGATCGGGGGCGGC
GCGCGCAGCGCGTTCTGGGCGCAGCTGATCGCCGATGCGCTGAACGTGCACACGCGCCAGCACGGCGGCGGCGAAACTGG
CGCGGCGCTCGGTGCGGCGCGCCTGGGCTGGCTCGCCGTCGGCGGCGATCCGCAGGTGGTGCTGACCAAGCCGCCGGTGC
GCGCCGAATACACGCCCGACGCCACGCGCCATGCGCAGCTGCGCGAGCGCCTCGACGCGTTCCGCGCGCTGTATCGCCAC
GTGCGCCCGCTTTACGAACCGTCGCGCGCGCGGCTCGCGTAA

Upstream 100 bases:

>100_bases
CCGCGCTCGCCAGCGGCCGCGCATCCGGGCGAACCTGCGTTGGCATGCGCGGGTGCGTGCAGCTAAAGTAGCGGCTCCTC
ACTGACGGAACGGATCGCTC

Downstream 100 bases:

>100_bases
GCGCCGCAGCGGCCGTCGGCCGCGCGCCCGGCATGCGTTACAGTGGATGCCGTCGGCGCCCCTGACGGCCGGCCCGCGGG
GGCGGCCCCCAGATCCAAAC

Product: xylulokinase

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 493; Mature: 493

Protein sequence:

>493_residues
MYLGIDLGTSEVKVLLLAPDGTVVGTAGTPFGVSRPHPRWAEQHPDDWWQGTLAALAALRERHPQAFAQVRGIGLSGQMH
GAVLLGRDDRVLRPAILWNDMRSADECALLTERAPDLHALAGNLAMPGFTAPKLLWVAKHEPDVFAATACVLMPKDYLRF
RLTGAKVSDPSDAAGTLWLDVARRDWSDALLAACDMTREQMPRIVEGNAPSGTLRADVARELGLSEAVVVAGGGGDNATS
ALGIGAIHAGDGFVSLGTSGVLSVVGDRFMPNPASAVHAFCHAIPDRWQLMSVVLSAASCLRWVCMLTGTDEPALLAEIE
ALDADALATAPLFLPYLSGERTPHNDPYAQGVFFGMTHATERAHLGYAVLEGVTLGLADGLDALHTAGVETDRLSLIGGG
ARSAFWAQLIADALNVHTRQHGGGETGAALGAARLGWLAVGGDPQVVLTKPPVRAEYTPDATRHAQLRERLDAFRALYRH
VRPLYEPSRARLA

Sequences:

>Translated_493_residues
MYLGIDLGTSEVKVLLLAPDGTVVGTAGTPFGVSRPHPRWAEQHPDDWWQGTLAALAALRERHPQAFAQVRGIGLSGQMH
GAVLLGRDDRVLRPAILWNDMRSADECALLTERAPDLHALAGNLAMPGFTAPKLLWVAKHEPDVFAATACVLMPKDYLRF
RLTGAKVSDPSDAAGTLWLDVARRDWSDALLAACDMTREQMPRIVEGNAPSGTLRADVARELGLSEAVVVAGGGGDNATS
ALGIGAIHAGDGFVSLGTSGVLSVVGDRFMPNPASAVHAFCHAIPDRWQLMSVVLSAASCLRWVCMLTGTDEPALLAEIE
ALDADALATAPLFLPYLSGERTPHNDPYAQGVFFGMTHATERAHLGYAVLEGVTLGLADGLDALHTAGVETDRLSLIGGG
ARSAFWAQLIADALNVHTRQHGGGETGAALGAARLGWLAVGGDPQVVLTKPPVRAEYTPDATRHAQLRERLDAFRALYRH
VRPLYEPSRARLA
>Mature_493_residues
MYLGIDLGTSEVKVLLLAPDGTVVGTAGTPFGVSRPHPRWAEQHPDDWWQGTLAALAALRERHPQAFAQVRGIGLSGQMH
GAVLLGRDDRVLRPAILWNDMRSADECALLTERAPDLHALAGNLAMPGFTAPKLLWVAKHEPDVFAATACVLMPKDYLRF
RLTGAKVSDPSDAAGTLWLDVARRDWSDALLAACDMTREQMPRIVEGNAPSGTLRADVARELGLSEAVVVAGGGGDNATS
ALGIGAIHAGDGFVSLGTSGVLSVVGDRFMPNPASAVHAFCHAIPDRWQLMSVVLSAASCLRWVCMLTGTDEPALLAEIE
ALDADALATAPLFLPYLSGERTPHNDPYAQGVFFGMTHATERAHLGYAVLEGVTLGLADGLDALHTAGVETDRLSLIGGG
ARSAFWAQLIADALNVHTRQHGGGETGAALGAARLGWLAVGGDPQVVLTKPPVRAEYTPDATRHAQLRERLDAFRALYRH
VRPLYEPSRARLA

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Homo sapiens, GI42794763, Length=437, Percent_Identity=22.4256292906178, Blast_Score=97, Evalue=5e-20,
Organism=Homo sapiens, GI4504007, Length=437, Percent_Identity=22.6544622425629, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI189409120, Length=437, Percent_Identity=22.6544622425629, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI164663828, Length=466, Percent_Identity=22.3175965665236, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI1789987, Length=487, Percent_Identity=52.5667351129363, Blast_Score=480, Evalue=1e-137,
Organism=Escherichia coli, GI1790005, Length=494, Percent_Identity=26.5182186234818, Blast_Score=123, Evalue=3e-29,
Organism=Escherichia coli, GI1789168, Length=495, Percent_Identity=26.0606060606061, Blast_Score=113, Evalue=3e-26,
Organism=Escherichia coli, GI1790361, Length=458, Percent_Identity=23.1441048034935, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI1787789, Length=371, Percent_Identity=24.2587601078167, Blast_Score=93, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17535599, Length=440, Percent_Identity=25.2272727272727, Blast_Score=98, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6321633, Length=335, Percent_Identity=25.9701492537313, Blast_Score=90, Evalue=9e-19,
Organism=Drosophila melanogaster, GI24657106, Length=467, Percent_Identity=23.1263383297645, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24657102, Length=467, Percent_Identity=23.1263383297645, Blast_Score=78, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 52405; Mature: 52405

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: PS00933 FGGY_KINASES_1 ; PS00445 FGGY_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLGIDLGTSEVKVLLLAPDGTVVGTAGTPFGVSRPHPRWAEQHPDDWWQGTLAALAALR
CEEEEECCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHH
ERHPQAFAQVRGIGLSGQMHGAVLLGRDDRVLRPAILWNDMRSADECALLTERAPDLHAL
HHCHHHHHHHHCCCCCCCCCCEEEECCCCCEECHHHHHHCCCCCHHHHHHHCCCCCHHHH
AGNLAMPGFTAPKLLWVAKHEPDVFAATACVLMPKDYLRFRLTGAKVSDPSDAAGTLWLD
HCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCHHEEEEEECCCCCCCCCCCCEEEEE
VARRDWSDALLAACDMTREQMPRIVEGNAPSGTLRADVARELGLSEAVVVAGGGGDNATS
EHHCCHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCH
ALGIGAIHAGDGFVSLGTSGVLSVVGDRFMPNPASAVHAFCHAIPDRWQLMSVVLSAASC
HHEEEEEECCCCEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LRWVCMLTGTDEPALLAEIEALDADALATAPLFLPYLSGERTPHNDPYAQGVFFGMTHAT
HHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHC
ERAHLGYAVLEGVTLGLADGLDALHTAGVETDRLSLIGGGARSAFWAQLIADALNVHTRQ
HHHHCCHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHC
HGGGETGAALGAARLGWLAVGGDPQVVLTKPPVRAEYTPDATRHAQLRERLDAFRALYRH
CCCCCCHHHHHHHHHCEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VRPLYEPSRARLA
HHHCCCCCCCCCC
>Mature Secondary Structure
MYLGIDLGTSEVKVLLLAPDGTVVGTAGTPFGVSRPHPRWAEQHPDDWWQGTLAALAALR
CEEEEECCCCCEEEEEECCCCCEEECCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHH
ERHPQAFAQVRGIGLSGQMHGAVLLGRDDRVLRPAILWNDMRSADECALLTERAPDLHAL
HHCHHHHHHHHCCCCCCCCCCEEEECCCCCEECHHHHHHCCCCCHHHHHHHCCCCCHHHH
AGNLAMPGFTAPKLLWVAKHEPDVFAATACVLMPKDYLRFRLTGAKVSDPSDAAGTLWLD
HCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCHHEEEEEECCCCCCCCCCCCEEEEE
VARRDWSDALLAACDMTREQMPRIVEGNAPSGTLRADVARELGLSEAVVVAGGGGDNATS
EHHCCHHHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCH
ALGIGAIHAGDGFVSLGTSGVLSVVGDRFMPNPASAVHAFCHAIPDRWQLMSVVLSAASC
HHEEEEEECCCCEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
LRWVCMLTGTDEPALLAEIEALDADALATAPLFLPYLSGERTPHNDPYAQGVFFGMTHAT
HHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHC
ERAHLGYAVLEGVTLGLADGLDALHTAGVETDRLSLIGGGARSAFWAQLIADALNVHTRQ
HHHHCCHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHC
HGGGETGAALGAARLGWLAVGGDPQVVLTKPPVRAEYTPDATRHAQLRERLDAFRALYRH
CCCCCCHHHHHHHHHCEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
VRPLYEPSRARLA
HHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 6320721; 8041620; 9278503 [H]