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The map label for this gene is pdxH [H]

Identifier: 115352667

GI number: 115352667

Start: 2879751

End: 2880395

Strand: Direct

Name: pdxH [H]

Synonym: Bamb_2616

Alternate gene names: 115352667

Gene position: 2879751-2880395 (Clockwise)

Preceding gene: 115352665

Following gene: 115352668

Centisome position: 80.97

GC content: 66.98

Gene sequence:

>645_bases
ATGACAACTCTCGCCGATCTTCGCATCAACTATTCGCGTGCTTCGCTCGATGAAGCCGATGTCGCCCCCGACCCTTTCGC
CCAGTTCGATCGCTGGTTCAAGGAGGCGCTCGCCGCCAAGCTTCCCGAGCCGAACACGATGACGCTCGCCACCGTCGGCG
AGAACGGCCGGCCGTCGGCCCGAATCGTGCTCATCAAGGGTGTCGACGAACGCGGGTTTGTCTTCTTTACCAATTACGAA
AGCCGCAAGGGGCGCGATCTCGCCGCCCATCCGTACGCGGCGCTGCTGTTCTACTGGATCGAGCTCGAGCGCCAGGTGCG
CATCGAAGGCCGGATCGAGAAAACCAGCACCGACGAAAGCGACCGCTATTTCGCGTCGCGCCCGCTCGGCTCGCGCATCG
GTGCGTGGGCGTCCGAGCAGAGCGCCGTGATCGACAGCCGTGCGACGCTCGAAGCGCGCGAGAAGGCCGTGGCCGAACGC
TACGGCGAGAATCCGCCGCGCCCGCCGCAGTGGGGCGGCTATCGCGTCGTGCCCGACGCGATCGAATTCTGGCAGGGCCG
CCCGTCGCGGCTGCACGATCGCCTGCTCTACACGCGCGACGCCGCGGCGGCGCCGGACTGGACCATCTCGCGCCTGTCGC
CGTAA

Upstream 100 bases:

>100_bases
CCCTCTATTTTGCCTGAACTCACCGCCTACACGCGCCACTGTGCACGCACGATTCTCGCGCGTTCGCTATACTGGCCCCG
GATTGAAGCGTTTGCATAAC

Downstream 100 bases:

>100_bases
GCAAGGCAGCGGCGCCGGTGCCTGCCGGTCGTATCTCGTGTTGCATGAGGGCGCCCGCCTCGCGGGGAGCGGGCGCCGGT
CAAGATACTTGGCTGTATTC

Product: pyridoxamine 5'-phosphate oxidase

Products: NA

Alternate protein names: PNP/PMP oxidase; PNPOx; Pyridoxal 5'-phosphate synthase [H]

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MTTLADLRINYSRASLDEADVAPDPFAQFDRWFKEALAAKLPEPNTMTLATVGENGRPSARIVLIKGVDERGFVFFTNYE
SRKGRDLAAHPYAALLFYWIELERQVRIEGRIEKTSTDESDRYFASRPLGSRIGAWASEQSAVIDSRATLEAREKAVAER
YGENPPRPPQWGGYRVVPDAIEFWQGRPSRLHDRLLYTRDAAAAPDWTISRLSP

Sequences:

>Translated_214_residues
MTTLADLRINYSRASLDEADVAPDPFAQFDRWFKEALAAKLPEPNTMTLATVGENGRPSARIVLIKGVDERGFVFFTNYE
SRKGRDLAAHPYAALLFYWIELERQVRIEGRIEKTSTDESDRYFASRPLGSRIGAWASEQSAVIDSRATLEAREKAVAER
YGENPPRPPQWGGYRVVPDAIEFWQGRPSRLHDRLLYTRDAAAAPDWTISRLSP
>Mature_213_residues
TTLADLRINYSRASLDEADVAPDPFAQFDRWFKEALAAKLPEPNTMTLATVGENGRPSARIVLIKGVDERGFVFFTNYES
RKGRDLAAHPYAALLFYWIELERQVRIEGRIEKTSTDESDRYFASRPLGSRIGAWASEQSAVIDSRATLEAREKAVAERY
GENPPRPPQWGGYRVVPDAIEFWQGRPSRLHDRLLYTRDAAAAPDWTISRLSP

Specific function: Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) [H]

COG id: COG0259

COG function: function code H; Pyridoxamine-phosphate oxidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyridoxamine 5'-phosphate oxidase family [H]

Homologues:

Organism=Homo sapiens, GI8922498, Length=228, Percent_Identity=42.1052631578947, Blast_Score=181, Evalue=5e-46,
Organism=Escherichia coli, GI1787926, Length=215, Percent_Identity=45.1162790697674, Blast_Score=191, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI17553712, Length=197, Percent_Identity=43.6548223350254, Blast_Score=167, Evalue=2e-42,
Organism=Saccharomyces cerevisiae, GI6319509, Length=211, Percent_Identity=45.9715639810426, Blast_Score=183, Evalue=2e-47,
Organism=Drosophila melanogaster, GI45551845, Length=228, Percent_Identity=43.421052631579, Blast_Score=170, Evalue=5e-43,
Organism=Drosophila melanogaster, GI24644901, Length=228, Percent_Identity=43.421052631579, Blast_Score=170, Evalue=6e-43,
Organism=Drosophila melanogaster, GI24644903, Length=177, Percent_Identity=29.3785310734463, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000659
- InterPro:   IPR019740
- InterPro:   IPR019576
- InterPro:   IPR011576
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF10590 PNPOx_C; PF01243 Pyridox_oxidase [H]

EC number: =1.4.3.5 [H]

Molecular weight: Translated: 24275; Mature: 24144

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS01064 PYRIDOX_OXIDASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLADLRINYSRASLDEADVAPDPFAQFDRWFKEALAAKLPEPNTMTLATVGENGRPSA
CCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCE
RIVLIKGVDERGFVFFTNYESRKGRDLAAHPYAALLFYWIELERQVRIEGRIEKTSTDES
EEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEEEECCCCCCC
DRYFASRPLGSRIGAWASEQSAVIDSRATLEAREKAVAERYGENPPRPPQWGGYRVVPDA
CCEEECCCCCHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHH
IEFWQGRPSRLHDRLLYTRDAAAAPDWTISRLSP
HHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTLADLRINYSRASLDEADVAPDPFAQFDRWFKEALAAKLPEPNTMTLATVGENGRPSA
CCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCE
RIVLIKGVDERGFVFFTNYESRKGRDLAAHPYAALLFYWIELERQVRIEGRIEKTSTDES
EEEEEEECCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEEEEECCCCCCC
DRYFASRPLGSRIGAWASEQSAVIDSRATLEAREKAVAERYGENPPRPPQWGGYRVVPDA
CCEEECCCCCHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHH
IEFWQGRPSRLHDRLLYTRDAAAAPDWTISRLSP
HHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA