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The map label for this gene is lspA

Identifier: 115352611

GI number: 115352611

Start: 2819110

End: 2819610

Strand: Direct

Name: lspA

Synonym: Bamb_2560

Alternate gene names: 115352611

Gene position: 2819110-2819610 (Clockwise)

Preceding gene: 115352610

Following gene: 115352612

Centisome position: 79.27

GC content: 66.07

Gene sequence:

>501_bases
ATGGCAAAAACCCTGTCGAAACCGGCCAGCGGCGCGCTCGCACCCTGGCTCGGCATTTCGCTGATCGTGATCCTGTTCGA
CCAGCTGTCGAAAATCGCGATCCTGAAAACGTTCGCGTACGGCGCGCAGCATGCGCTGACGTCGTTCTTCAGCCTCGTGC
TGGTGTACAACCGCGGCGCCGCGTTCGGCTTCCTGTCCACCGCGAGCGGCTGGCAGCGCTGGGCGTTCACCGCGCTCGGC
ATCGGCGCGACGCTCGTGATCTGCTTCCTGCTGCGCCGCCATGGCCAGCAGCGGCTGTTCAGCCTGTCGCTCGCGCTGAT
CCTCGGCGGCGCGCTCGGCAACGTGATCGACCGGCTGGTCTACGGCCATGTGATCGACTTTCTCGATTTCCACGTCGGCG
GCTGGCACTTCCCGGCGTTCAACCTCGCCGATTCCGCGATCACGATCGGCGCGGTGCTGCTGGTCTACGACGAACTGCGT
CGCGTGCGCGGCTCGCGCTGA

Upstream 100 bases:

>100_bases
ACCGCGAGGACGTCGGCGCGCACGCCGATCATCCGACGCTGTGCGGACGCTGCTTCTCGAACCTGTTTGAAAACGGCGAA
ATCCGGAGCGCGGCTTAACT

Downstream 100 bases:

>100_bases
GCGCGCATACTCGGTGTCGACGGCCGGCTTCGCGCCGGCCGTTCCGTTTGACCCTTGGAGGCCTGAGTTGGCACACGCAG
AACTCGCTGGAAAACACCTC

Product: lipoprotein signal peptidase

Products: NA

Alternate protein names: Prolipoprotein signal peptidase; Signal peptidase II; SPase II [H]

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MAKTLSKPASGALAPWLGISLIVILFDQLSKIAILKTFAYGAQHALTSFFSLVLVYNRGAAFGFLSTASGWQRWAFTALG
IGATLVICFLLRRHGQQRLFSLSLALILGGALGNVIDRLVYGHVIDFLDFHVGGWHFPAFNLADSAITIGAVLLVYDELR
RVRGSR

Sequences:

>Translated_166_residues
MAKTLSKPASGALAPWLGISLIVILFDQLSKIAILKTFAYGAQHALTSFFSLVLVYNRGAAFGFLSTASGWQRWAFTALG
IGATLVICFLLRRHGQQRLFSLSLALILGGALGNVIDRLVYGHVIDFLDFHVGGWHFPAFNLADSAITIGAVLLVYDELR
RVRGSR
>Mature_165_residues
AKTLSKPASGALAPWLGISLIVILFDQLSKIAILKTFAYGAQHALTSFFSLVLVYNRGAAFGFLSTASGWQRWAFTALGI
GATLVICFLLRRHGQQRLFSLSLALILGGALGNVIDRLVYGHVIDFLDFHVGGWHFPAFNLADSAITIGAVLLVYDELRR
VRGSR

Specific function: This protein specifically catalyzes the removal of signal peptides from prolipoproteins [H]

COG id: COG0597

COG function: function code MU; Lipoprotein signal peptidase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase A8 family [H]

Homologues:

Organism=Escherichia coli, GI1786210, Length=152, Percent_Identity=42.7631578947368, Blast_Score=125, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001872 [H]

Pfam domain/function: PF01252 Peptidase_A8 [H]

EC number: =3.4.23.36 [H]

Molecular weight: Translated: 18065; Mature: 17934

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: PS00855 SPASE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTLSKPASGALAPWLGISLIVILFDQLSKIAILKTFAYGAQHALTSFFSLVLVYNRGA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AFGFLSTASGWQRWAFTALGIGATLVICFLLRRHGQQRLFSLSLALILGGALGNVIDRLV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
YGHVIDFLDFHVGGWHFPAFNLADSAITIGAVLLVYDELRRVRGSR
HHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AKTLSKPASGALAPWLGISLIVILFDQLSKIAILKTFAYGAQHALTSFFSLVLVYNRGA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AFGFLSTASGWQRWAFTALGIGATLVICFLLRRHGQQRLFSLSLALILGGALGNVIDRLV
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
YGHVIDFLDFHVGGWHFPAFNLADSAITIGAVLLVYDELRRVRGSR
HHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA