Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352569

Identifier: 115352569

GI number: 115352569

Start: 2775379

End: 2775762

Strand: Direct

Name: 115352569

Synonym: Bamb_2518

Alternate gene names: NA

Gene position: 2775379-2775762 (Clockwise)

Preceding gene: 115352568

Following gene: 115352576

Centisome position: 78.04

GC content: 72.14

Gene sequence:

>384_bases
ATGAGTTCGCACGGCATCGTCCTGTTCGGCCACGGCGCACGCGATCCGCGCTGGGCCGAGCCGTTCGAGCGGCTGGCCGC
GCGGCTGCGCGGCAGCGGCGCACCCGCGCCGCACGTGTCGCTCGCGTTCCTCGAACTGATGACGCCTTCGCTCGACACGG
CCGTCGCCGCGCAGGTCGCGGCCGGCTGCACGCGCATCACCGTGGTGCCCGTGTTCTTCGGCCAAGGGGGCCATGTCCGT
CGCGACCTGCCGCAGCTCGTCGACGCCTGCCGGGCCGCCCATCCGAATGTCGAGATCCGTTGCGCGACGGCGGTCGGCGA
AGACGACGGCGTGCTCGATGCCATCGCACGCTACTGCATCGACCAGCTCGGCCGCAACGCGTAG

Upstream 100 bases:

>100_bases
CTCACCGCGGCGACGCCGGGCCTCATCTATCTCGCGCTCGGCCTGTTCGCGCTCAAGTGGGTCGACCGGCACTGAGCGCC
GTCACGACGGAGGCTTCGAC

Downstream 100 bases:

>100_bases
CCGGATCAGCGGCACCAACAAAAAAGCGCCGGCTTCCGCCAGCGCTCATTCGAATCACCCACCGCGAAGCCGAGCGGCTG
CCGCTCGGGAACCGCTACGT

Product: cobalamin (vitamin B12) biosynthesis CbiX protein

Products: NA

Alternate protein names: Sirohydrochlorin Cobaltochelatase; Cobalamin Biosynthesis CbiX; Cobaltochelatase; Cobalamin Biosynthesis Cbix Protein

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MSSHGIVLFGHGARDPRWAEPFERLAARLRGSGAPAPHVSLAFLELMTPSLDTAVAAQVAAGCTRITVVPVFFGQGGHVR
RDLPQLVDACRAAHPNVEIRCATAVGEDDGVLDAIARYCIDQLGRNA

Sequences:

>Translated_127_residues
MSSHGIVLFGHGARDPRWAEPFERLAARLRGSGAPAPHVSLAFLELMTPSLDTAVAAQVAAGCTRITVVPVFFGQGGHVR
RDLPQLVDACRAAHPNVEIRCATAVGEDDGVLDAIARYCIDQLGRNA
>Mature_126_residues
SSHGIVLFGHGARDPRWAEPFERLAARLRGSGAPAPHVSLAFLELMTPSLDTAVAAQVAAGCTRITVVPVFFGQGGHVRR
DLPQLVDACRAAHPNVEIRCATAVGEDDGVLDAIARYCIDQLGRNA

Specific function: Unknown

COG id: COG2138

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13470; Mature: 13338

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSHGIVLFGHGARDPRWAEPFERLAARLRGSGAPAPHVSLAFLELMTPSLDTAVAAQVA
CCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHH
AGCTRITVVPVFFGQGGHVRRDLPQLVDACRAAHPNVEIRCATAVGEDDGVLDAIARYCI
CCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHH
DQLGRNA
HHHCCCC
>Mature Secondary Structure 
SSHGIVLFGHGARDPRWAEPFERLAARLRGSGAPAPHVSLAFLELMTPSLDTAVAAQVA
CCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHH
AGCTRITVVPVFFGQGGHVRRDLPQLVDACRAAHPNVEIRCATAVGEDDGVLDAIARYCI
CCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHH
DQLGRNA
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA