| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115352491
Identifier: 115352491
GI number: 115352491
Start: 2687835
End: 2688425
Strand: Direct
Name: 115352491
Synonym: Bamb_2440
Alternate gene names: NA
Gene position: 2687835-2688425 (Clockwise)
Preceding gene: 115352487
Following gene: 115352492
Centisome position: 75.57
GC content: 70.22
Gene sequence:
>591_bases ATGCGTCGCCGCTCACCCAGACAGGACTTGCACTCAGGGATGAACACACGTTTCGAACCGCCGCGCCGGGCCATGACGGC GCGCATCGCGCTGGCCACGCTTGCGACGGCCACGCTGCTGTCCGGCTGCAACTCGCTGTACAGCGAAGGCGCGACCGCCG GCGCCGGTATCGCGGGCGCCGCGATTGCCTCCAAGGTCACCAACAACGCCGCCGTCGCGACGGGCATCGGCCTCGGCGCC GTGGCCGGCGCGCGTGCGGGCGTCCAGTACTCGCAGCGCGTCGCACACCGTTACACCCAGGAACAGATCGCGAAGGCGGC GGCCCCGCTCGACGTCGGCGGCGTTGCGCCGTGGTCGACGCACCATTCGTTCCCGATCGAGGACGACGAACAGGGCCGCG TGACGGTCAGCCGGATGATCAGCGTCGGTCCGCTCGACTGCAAGGAGATCGTGTTCGCGGTCGACACGCCCGCGAAGGCC GACAAGGCCGCGCAGTCGGCGTTCTACGTCGCCACGATCTGCCGCGACGGTCCGGTGTGGAAATGGGCGTCGGCGGAGCC CGCAACCGAACGCTGGGGCGCGCTGCAATGA
Upstream 100 bases:
>100_bases TAACGCCGCGCGTACGCGCGCGTGCCGCCGCCGCGATTTGTCAAAGCTTTGCAGTTTTCCTATGACAATTGCGAAACAAT GACGCGGCAAGGGGGCGCGC
Downstream 100 bases:
>100_bases GCATCGCGATCCGTATCGCGACGATCGGCGCGCTGTGCGCGGCCAGCGCCGCGCTGTCGGGCTGCGGGTCGGTCGGCGCG GCGAGCGGCGCGCTGGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MRRRSPRQDLHSGMNTRFEPPRRAMTARIALATLATATLLSGCNSLYSEGATAGAGIAGAAIASKVTNNAAVATGIGLGA VAGARAGVQYSQRVAHRYTQEQIAKAAAPLDVGGVAPWSTHHSFPIEDDEQGRVTVSRMISVGPLDCKEIVFAVDTPAKA DKAAQSAFYVATICRDGPVWKWASAEPATERWGALQ
Sequences:
>Translated_196_residues MRRRSPRQDLHSGMNTRFEPPRRAMTARIALATLATATLLSGCNSLYSEGATAGAGIAGAAIASKVTNNAAVATGIGLGA VAGARAGVQYSQRVAHRYTQEQIAKAAAPLDVGGVAPWSTHHSFPIEDDEQGRVTVSRMISVGPLDCKEIVFAVDTPAKA DKAAQSAFYVATICRDGPVWKWASAEPATERWGALQ >Mature_196_residues MRRRSPRQDLHSGMNTRFEPPRRAMTARIALATLATATLLSGCNSLYSEGATAGAGIAGAAIASKVTNNAAVATGIGLGA VAGARAGVQYSQRVAHRYTQEQIAKAAAPLDVGGVAPWSTHHSFPIEDDEQGRVTVSRMISVGPLDCKEIVFAVDTPAKA DKAAQSAFYVATICRDGPVWKWASAEPATERWGALQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20590; Mature: 20590
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRSPRQDLHSGMNTRFEPPRRAMTARIALATLATATLLSGCNSLYSEGATAGAGIAGA CCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH AIASKVTNNAAVATGIGLGAVAGARAGVQYSQRVAHRYTQEQIAKAAAPLDVGGVAPWST HHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC HHSFPIEDDEQGRVTVSRMISVGPLDCKEIVFAVDTPAKADKAAQSAFYVATICRDGPVW CCCCCCCCCCCCCEEHHHHHCCCCCCHHHEEEECCCCCHHHHHHHHHHHEEEEECCCCCE KWASAEPATERWGALQ ECCCCCCCHHHCCCCC >Mature Secondary Structure MRRRSPRQDLHSGMNTRFEPPRRAMTARIALATLATATLLSGCNSLYSEGATAGAGIAGA CCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH AIASKVTNNAAVATGIGLGAVAGARAGVQYSQRVAHRYTQEQIAKAAAPLDVGGVAPWST HHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC HHSFPIEDDEQGRVTVSRMISVGPLDCKEIVFAVDTPAKADKAAQSAFYVATICRDGPVW CCCCCCCCCCCCCEEHHHHHCCCCCCHHHEEEECCCCCHHHHHHHHHHHEEEEECCCCCE KWASAEPATERWGALQ ECCCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA