Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is phnB [H]

Identifier: 115352426

GI number: 115352426

Start: 2621320

End: 2621775

Strand: Direct

Name: phnB [H]

Synonym: Bamb_2375

Alternate gene names: 115352426

Gene position: 2621320-2621775 (Clockwise)

Preceding gene: 115352425

Following gene: 115352430

Centisome position: 73.7

GC content: 62.72

Gene sequence:

>456_bases
ATGCAAGTCCAACCGTACCTGACGTTCTACGGCCGCGCGGAAGAAGCCCTTCAGTTCTACGAAAAGGCGCTCGGCGCGAA
GACGATGTTCAAGATGCATTTCAAGGATGCGCCGCCCAATCCCGATTACCCGATGACGCCGGAGATGGCCGACAAGGTGA
TGCATGCGAGCTTCACGATCGGCGACTCGATGATCATGTGCTCGGACGGCGACTGCAGCCAGCCGGGCGGCGGCACGCAC
GCCGGCTATTCGTTGTCGCTGAACCCGGCGACGGTCGAGGAAGGCCAGAAGCTGTTCAATGCGCTCGCCGACGGCGGCGA
AGTGACGATGCCGTTCGGCAAGACGTTCTGGGCGCTCGGCTTCGGGATGGCGAAGGATCGTTTCGGCGTGCACTGGATGG
TCAACGTCGAGGATCTGTCGCAGCGCGGGGATCTCGCGAAACGCGCGCAGGGCTGA

Upstream 100 bases:

>100_bases
TCACGAGTGCGCCGGCCGCATCCCGACGCGCTCTTCCCGGTCAATCGTCGAAGTACCCGGGCCGGCCCCGACATGCCAGC
CCGGCCAACAGGAGACAACG

Downstream 100 bases:

>100_bases
CGCCAGCGAAAACGCCCGCCACTTCGCAGTGACGGGCGTCGTCGTTGCGGCGCGATGCGCGGCGCGCGGCCGCGCCGCCC
GTGTCAGCTCTCGACCACGT

Product: 3-demethylubiquinone-9 3-methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MQVQPYLTFYGRAEEALQFYEKALGAKTMFKMHFKDAPPNPDYPMTPEMADKVMHASFTIGDSMIMCSDGDCSQPGGGTH
AGYSLSLNPATVEEGQKLFNALADGGEVTMPFGKTFWALGFGMAKDRFGVHWMVNVEDLSQRGDLAKRAQG

Sequences:

>Translated_151_residues
MQVQPYLTFYGRAEEALQFYEKALGAKTMFKMHFKDAPPNPDYPMTPEMADKVMHASFTIGDSMIMCSDGDCSQPGGGTH
AGYSLSLNPATVEEGQKLFNALADGGEVTMPFGKTFWALGFGMAKDRFGVHWMVNVEDLSQRGDLAKRAQG
>Mature_151_residues
MQVQPYLTFYGRAEEALQFYEKALGAKTMFKMHFKDAPPNPDYPMTPEMADKVMHASFTIGDSMIMCSDGDCSQPGGGTH
AGYSLSLNPATVEEGQKLFNALADGGEVTMPFGKTFWALGFGMAKDRFGVHWMVNVEDLSQRGDLAKRAQG

Specific function: Unknown

COG id: COG2764

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790546, Length=144, Percent_Identity=37.5, Blast_Score=100, Evalue=4e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16572; Mature: 16572

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
7.3 %Met     (Translated Protein)
8.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
7.3 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVQPYLTFYGRAEEALQFYEKALGAKTMFKMHFKDAPPNPDYPMTPEMADKVMHASFTI
CCCCCCEEECCCHHHHHHHHHHHHCHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHEEEE
GDSMIMCSDGDCSQPGGGTHAGYSLSLNPATVEEGQKLFNALADGGEVTMPFGKTFWALG
CCCEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHH
FGMAKDRFGVHWMVNVEDLSQRGDLAKRAQG
CCCCCCCCCEEEEEEHHHHHHCCCHHHHCCC
>Mature Secondary Structure
MQVQPYLTFYGRAEEALQFYEKALGAKTMFKMHFKDAPPNPDYPMTPEMADKVMHASFTI
CCCCCCEEECCCHHHHHHHHHHHHCHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHEEEE
GDSMIMCSDGDCSQPGGGTHAGYSLSLNPATVEEGQKLFNALADGGEVTMPFGKTFWALG
CCCEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHH
FGMAKDRFGVHWMVNVEDLSQRGDLAKRAQG
CCCCCCCCCEEEEEEHHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2155230; 7610040; 9278503 [H]