| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is phnB [H]
Identifier: 115352426
GI number: 115352426
Start: 2621320
End: 2621775
Strand: Direct
Name: phnB [H]
Synonym: Bamb_2375
Alternate gene names: 115352426
Gene position: 2621320-2621775 (Clockwise)
Preceding gene: 115352425
Following gene: 115352430
Centisome position: 73.7
GC content: 62.72
Gene sequence:
>456_bases ATGCAAGTCCAACCGTACCTGACGTTCTACGGCCGCGCGGAAGAAGCCCTTCAGTTCTACGAAAAGGCGCTCGGCGCGAA GACGATGTTCAAGATGCATTTCAAGGATGCGCCGCCCAATCCCGATTACCCGATGACGCCGGAGATGGCCGACAAGGTGA TGCATGCGAGCTTCACGATCGGCGACTCGATGATCATGTGCTCGGACGGCGACTGCAGCCAGCCGGGCGGCGGCACGCAC GCCGGCTATTCGTTGTCGCTGAACCCGGCGACGGTCGAGGAAGGCCAGAAGCTGTTCAATGCGCTCGCCGACGGCGGCGA AGTGACGATGCCGTTCGGCAAGACGTTCTGGGCGCTCGGCTTCGGGATGGCGAAGGATCGTTTCGGCGTGCACTGGATGG TCAACGTCGAGGATCTGTCGCAGCGCGGGGATCTCGCGAAACGCGCGCAGGGCTGA
Upstream 100 bases:
>100_bases TCACGAGTGCGCCGGCCGCATCCCGACGCGCTCTTCCCGGTCAATCGTCGAAGTACCCGGGCCGGCCCCGACATGCCAGC CCGGCCAACAGGAGACAACG
Downstream 100 bases:
>100_bases CGCCAGCGAAAACGCCCGCCACTTCGCAGTGACGGGCGTCGTCGTTGCGGCGCGATGCGCGGCGCGCGGCCGCGCCGCCC GTGTCAGCTCTCGACCACGT
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MQVQPYLTFYGRAEEALQFYEKALGAKTMFKMHFKDAPPNPDYPMTPEMADKVMHASFTIGDSMIMCSDGDCSQPGGGTH AGYSLSLNPATVEEGQKLFNALADGGEVTMPFGKTFWALGFGMAKDRFGVHWMVNVEDLSQRGDLAKRAQG
Sequences:
>Translated_151_residues MQVQPYLTFYGRAEEALQFYEKALGAKTMFKMHFKDAPPNPDYPMTPEMADKVMHASFTIGDSMIMCSDGDCSQPGGGTH AGYSLSLNPATVEEGQKLFNALADGGEVTMPFGKTFWALGFGMAKDRFGVHWMVNVEDLSQRGDLAKRAQG >Mature_151_residues MQVQPYLTFYGRAEEALQFYEKALGAKTMFKMHFKDAPPNPDYPMTPEMADKVMHASFTIGDSMIMCSDGDCSQPGGGTH AGYSLSLNPATVEEGQKLFNALADGGEVTMPFGKTFWALGFGMAKDRFGVHWMVNVEDLSQRGDLAKRAQG
Specific function: Unknown
COG id: COG2764
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790546, Length=144, Percent_Identity=37.5, Blast_Score=100, Evalue=4e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16572; Mature: 16572
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 7.3 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 7.3 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVQPYLTFYGRAEEALQFYEKALGAKTMFKMHFKDAPPNPDYPMTPEMADKVMHASFTI CCCCCCEEECCCHHHHHHHHHHHHCHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHEEEE GDSMIMCSDGDCSQPGGGTHAGYSLSLNPATVEEGQKLFNALADGGEVTMPFGKTFWALG CCCEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHH FGMAKDRFGVHWMVNVEDLSQRGDLAKRAQG CCCCCCCCCEEEEEEHHHHHHCCCHHHHCCC >Mature Secondary Structure MQVQPYLTFYGRAEEALQFYEKALGAKTMFKMHFKDAPPNPDYPMTPEMADKVMHASFTI CCCCCCEEECCCHHHHHHHHHHHHCHHHEEEEECCCCCCCCCCCCCHHHHHHHHHHEEEE GDSMIMCSDGDCSQPGGGTHAGYSLSLNPATVEEGQKLFNALADGGEVTMPFGKTFWALG CCCEEEECCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCHHHHHH FGMAKDRFGVHWMVNVEDLSQRGDLAKRAQG CCCCCCCCCEEEEEEHHHHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 7610040; 9278503 [H]