Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352410

Identifier: 115352410

GI number: 115352410

Start: 2600584

End: 2601129

Strand: Direct

Name: 115352410

Synonym: Bamb_2359

Alternate gene names: NA

Gene position: 2600584-2601129 (Clockwise)

Preceding gene: 115352405

Following gene: 115352411

Centisome position: 73.12

GC content: 70.33

Gene sequence:

>546_bases
ATGTCCCACTTGTCCGCCGCCGCACGCGCGCGCACCGGTCTGCTTCGCCCGTTGCGCGCGCCGCTCTGCGCGTTGACGCT
TGCCACGCTTCTCGCCGCCTGCGCGATGCCGACCCACCCCGATTCCGCCGCCCCCGCACCCGATCCGTACAACCCGGCCG
CCGTCCAGCTGCTCGACGACACGAGCTGGGAGCTCACGAGCTGGCTGAACGCCGACGGCACGTCGCGCACGATTCCGCAC
GGCGACAACGGCGAGCCGATCAAGCTCGCGCTGTCCACCGAATCGGGCATCCGGCGCGCCAGCGGCTTTTCCGGCTGCAA
CCGTTACATGGGCACCTATGCGCTGAAGAACGGTCTGTTGAGCTTCGGGCCGCTCGCCGGCACGCGCATGGCGTGCCCGA
ACGCGCTCGGCGGCCAGCTCGAGCACGCGTACCTCGATGCGCTCGCGCACATCGCAAAGACCGGCGTGCAGATGCGCGAG
CCGCAGCAACTGCAGATCGTGACCGAAGCCGGCGCGACGCTGACCTTCACGCGCCGGAGCCCCTGA

Upstream 100 bases:

>100_bases
GGGATGCGAACGTTTTCATGCGCGAAGTGTCGGCTCGCCTCGCGCGGGGCGGGTGCGTTACTCTTACGCCTTGTTCAGAA
TCCGATGAGGAACGAGGCTC

Downstream 100 bases:

>100_bases
TGCAGCGCGCGGGCGAAGGCCGGCCGGCCGCCTTCGCCACGCGCGGAACCCGGACGCATCCGTCCCGCAGCGTGGAAGCG
CACCGCTGCCTTCATGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: Heat Shock Lipoprotein; Meta/HslJ Family; Transmembrane Lipoprotein DUF; Heat Shock Protein

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MSHLSAAARARTGLLRPLRAPLCALTLATLLAACAMPTHPDSAAPAPDPYNPAAVQLLDDTSWELTSWLNADGTSRTIPH
GDNGEPIKLALSTESGIRRASGFSGCNRYMGTYALKNGLLSFGPLAGTRMACPNALGGQLEHAYLDALAHIAKTGVQMRE
PQQLQIVTEAGATLTFTRRSP

Sequences:

>Translated_181_residues
MSHLSAAARARTGLLRPLRAPLCALTLATLLAACAMPTHPDSAAPAPDPYNPAAVQLLDDTSWELTSWLNADGTSRTIPH
GDNGEPIKLALSTESGIRRASGFSGCNRYMGTYALKNGLLSFGPLAGTRMACPNALGGQLEHAYLDALAHIAKTGVQMRE
PQQLQIVTEAGATLTFTRRSP
>Mature_180_residues
SHLSAAARARTGLLRPLRAPLCALTLATLLAACAMPTHPDSAAPAPDPYNPAAVQLLDDTSWELTSWLNADGTSRTIPHG
DNGEPIKLALSTESGIRRASGFSGCNRYMGTYALKNGLLSFGPLAGTRMACPNALGGQLEHAYLDALAHIAKTGVQMREP
QQLQIVTEAGATLTFTRRSP

Specific function: Unknown

COG id: COG3187

COG function: function code O; Heat shock protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19092; Mature: 18961

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHLSAAARARTGLLRPLRAPLCALTLATLLAACAMPTHPDSAAPAPDPYNPAAVQLLDD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECC
TSWELTSWLNADGTSRTIPHGDNGEPIKLALSTESGIRRASGFSGCNRYMGTYALKNGLL
CCHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHCCCC
SFGPLAGTRMACPNALGGQLEHAYLDALAHIAKTGVQMREPQQLQIVTEAGATLTFTRRS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCC
P
C
>Mature Secondary Structure 
SHLSAAARARTGLLRPLRAPLCALTLATLLAACAMPTHPDSAAPAPDPYNPAAVQLLDD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECC
TSWELTSWLNADGTSRTIPHGDNGEPIKLALSTESGIRRASGFSGCNRYMGTYALKNGLL
CCHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHCCCC
SFGPLAGTRMACPNALGGQLEHAYLDALAHIAKTGVQMREPQQLQIVTEAGATLTFTRRS
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEEECCC
P
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA