| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115352278
Identifier: 115352278
GI number: 115352278
Start: 2460281
End: 2460532
Strand: Direct
Name: 115352278
Synonym: Bamb_2227
Alternate gene names: NA
Gene position: 2460281-2460532 (Clockwise)
Preceding gene: 115352277
Following gene: 115352282
Centisome position: 69.18
GC content: 61.51
Gene sequence:
>252_bases ATGATCAACCTGATCCGCATCGGTGACGACACGGACCACGACGGCAAGGTCGAAACCGCCTCCACGACCATGCGCTTCGA CGGCCGCTATGTCGCCCGCAAGGGCGACCGCGTGTCGTGCCCGCGACATCCTGACGTGTCACCTAACCTCATCGAGGAAG GCGATCCATCGATGACTGATGACGGAATACCGATCGCACGGCACGGCCATCGCGCGACGTGTGGCTGTCACCTGATTTCG AGTCTCCTCTGA
Upstream 100 bases:
>100_bases CCGATCCCCCGGAGAATCGTTAATGGGCGCCGGCCCGCTCCGTTAGAGTCATCCAGATAGCCGCCGGCATTACTTGAGAG CCATTTTTCTAGACTGAGTC
Downstream 100 bases:
>100_bases CTGACACCCATTGCCCGACCGATGTAAAAGCGGTCATCACCGCTCGCCGCGTTGAGATTGTCTTGGGTCACAGACGAAAA CGTGAAGCCGCTTGATTCTC
Product: PAAR repeat-containing protein
Products: NA
Alternate protein names: Paar Repeat-Containing Protein
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MINLIRIGDDTDHDGKVETASTTMRFDGRYVARKGDRVSCPRHPDVSPNLIEEGDPSMTDDGIPIARHGHRATCGCHLIS SLL
Sequences:
>Translated_83_residues MINLIRIGDDTDHDGKVETASTTMRFDGRYVARKGDRVSCPRHPDVSPNLIEEGDPSMTDDGIPIARHGHRATCGCHLIS SLL >Mature_83_residues MINLIRIGDDTDHDGKVETASTTMRFDGRYVARKGDRVSCPRHPDVSPNLIEEGDPSMTDDGIPIARHGHRATCGCHLIS SLL
Specific function: Unknown
COG id: COG4104
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9099; Mature: 9099
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINLIRIGDDTDHDGKVETASTTMRFDGRYVARKGDRVSCPRHPDVSPNLIEEGDPSMTD CCEEEECCCCCCCCCEEECCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC DGIPIARHGHRATCGCHLISSLL CCCCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MINLIRIGDDTDHDGKVETASTTMRFDGRYVARKGDRVSCPRHPDVSPNLIEEGDPSMTD CCEEEECCCCCCCCCEEECCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC DGIPIARHGHRATCGCHLISSLL CCCCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA