Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115352278

Identifier: 115352278

GI number: 115352278

Start: 2460281

End: 2460532

Strand: Direct

Name: 115352278

Synonym: Bamb_2227

Alternate gene names: NA

Gene position: 2460281-2460532 (Clockwise)

Preceding gene: 115352277

Following gene: 115352282

Centisome position: 69.18

GC content: 61.51

Gene sequence:

>252_bases
ATGATCAACCTGATCCGCATCGGTGACGACACGGACCACGACGGCAAGGTCGAAACCGCCTCCACGACCATGCGCTTCGA
CGGCCGCTATGTCGCCCGCAAGGGCGACCGCGTGTCGTGCCCGCGACATCCTGACGTGTCACCTAACCTCATCGAGGAAG
GCGATCCATCGATGACTGATGACGGAATACCGATCGCACGGCACGGCCATCGCGCGACGTGTGGCTGTCACCTGATTTCG
AGTCTCCTCTGA

Upstream 100 bases:

>100_bases
CCGATCCCCCGGAGAATCGTTAATGGGCGCCGGCCCGCTCCGTTAGAGTCATCCAGATAGCCGCCGGCATTACTTGAGAG
CCATTTTTCTAGACTGAGTC

Downstream 100 bases:

>100_bases
CTGACACCCATTGCCCGACCGATGTAAAAGCGGTCATCACCGCTCGCCGCGTTGAGATTGTCTTGGGTCACAGACGAAAA
CGTGAAGCCGCTTGATTCTC

Product: PAAR repeat-containing protein

Products: NA

Alternate protein names: Paar Repeat-Containing Protein

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MINLIRIGDDTDHDGKVETASTTMRFDGRYVARKGDRVSCPRHPDVSPNLIEEGDPSMTDDGIPIARHGHRATCGCHLIS
SLL

Sequences:

>Translated_83_residues
MINLIRIGDDTDHDGKVETASTTMRFDGRYVARKGDRVSCPRHPDVSPNLIEEGDPSMTDDGIPIARHGHRATCGCHLIS
SLL
>Mature_83_residues
MINLIRIGDDTDHDGKVETASTTMRFDGRYVARKGDRVSCPRHPDVSPNLIEEGDPSMTDDGIPIARHGHRATCGCHLIS
SLL

Specific function: Unknown

COG id: COG4104

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9099; Mature: 9099

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINLIRIGDDTDHDGKVETASTTMRFDGRYVARKGDRVSCPRHPDVSPNLIEEGDPSMTD
CCEEEECCCCCCCCCEEECCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
DGIPIARHGHRATCGCHLISSLL
CCCCCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MINLIRIGDDTDHDGKVETASTTMRFDGRYVARKGDRVSCPRHPDVSPNLIEEGDPSMTD
CCEEEECCCCCCCCCEEECCCEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
DGIPIARHGHRATCGCHLISSLL
CCCCCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA