| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is suhB [H]
Identifier: 115352171
GI number: 115352171
Start: 2329837
End: 2330640
Strand: Direct
Name: suhB [H]
Synonym: Bamb_2120
Alternate gene names: 115352171
Gene position: 2329837-2330640 (Clockwise)
Preceding gene: 115352168
Following gene: 115352172
Centisome position: 65.51
GC content: 64.93
Gene sequence:
>804_bases ATGCATCCCATGCTCAATATTGCTGTCAAGGCTGCGCGCCGCGCCGGACAGATCATCAACCGCGCCTCCCTCGACCTCGA CCTGATCGAGATCCGCAAGAAGCAGCAGAACGACTTCGTCACCGAAGTGGACAAGGCCGCCGAAGAGGCGATCATCGAGA CGCTGAAGACCGCCTACCCCGACCACGCGATCCTCGCGGAAGAATCGGGCGAATCCGAGAACGAATCCGAATTCAAGTGG ATCATCGATCCGCTCGACGGCACGACCAACTTCATCCACGGCTTCCCGTACTACTGCGTGTCGATCGCGCTCGAGCACAA GGGCGTCGTCACGCAGGCCGTCGTCTACGATCCGAACAAGAACGACCTGTTCACGGCAACCCGCGGCCGCGGCGCGTACC TGAACGACCGCCGCATCCGCGTCGGCCGCCGCGACCGCCTGGCGGACGCGCTGGTCGGCACCGGCTTCCCGTTCCGCGAG AAGGACGGCCTGGACGCCTACGCGCGCCTGTTCACCGAAATGACCCAGGCCTGCACGGGCCTGCGTCGTCCGGGCGCGGC CGCGCTCGACCTCGCGAACGTCGCGGCCGGCCGTCTCGACGCATTCTTCGAGCAAGGCATCAACGTGTGGGACATGGCGG CAGGCAGCCTGCTGATCACCGAAGCCGGCGGCCTCGTCGGCAACTACACGGGCGACGCCGACTTCCTGCATCGCCATGAG ATCGTCGCGGCGAACCCGAAGATCTATGCGCAGATGATTCCGATCCTGAACCGCTACAGCCGCGTGCATCCGGCAGCGGA ATAA
Upstream 100 bases:
>100_bases TGTCAATTCGCGTCTCATCTCGCCCGGCACGTTTTGCGCCGTTCCAGGCGGTGTGTTCCACTTCGTGGCGGCCCGTGCCG CCGGCTACAGGATCCAGCTC
Downstream 100 bases:
>100_bases GCCCGGGCCGCGCCCGCGCGGCACGGCTTGCGCATCAACCACGCGCTGGCAGCGTCATGATGGAGCGCTCGTTGCCTTTC CGTTGTCCGGGGAGCGAAGT
Product: inositol monophosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MHPMLNIAVKAARRAGQIINRASLDLDLIEIRKKQQNDFVTEVDKAAEEAIIETLKTAYPDHAILAEESGESENESEFKW IIDPLDGTTNFIHGFPYYCVSIALEHKGVVTQAVVYDPNKNDLFTATRGRGAYLNDRRIRVGRRDRLADALVGTGFPFRE KDGLDAYARLFTEMTQACTGLRRPGAAALDLANVAAGRLDAFFEQGINVWDMAAGSLLITEAGGLVGNYTGDADFLHRHE IVAANPKIYAQMIPILNRYSRVHPAAE
Sequences:
>Translated_267_residues MHPMLNIAVKAARRAGQIINRASLDLDLIEIRKKQQNDFVTEVDKAAEEAIIETLKTAYPDHAILAEESGESENESEFKW IIDPLDGTTNFIHGFPYYCVSIALEHKGVVTQAVVYDPNKNDLFTATRGRGAYLNDRRIRVGRRDRLADALVGTGFPFRE KDGLDAYARLFTEMTQACTGLRRPGAAALDLANVAAGRLDAFFEQGINVWDMAAGSLLITEAGGLVGNYTGDADFLHRHE IVAANPKIYAQMIPILNRYSRVHPAAE >Mature_267_residues MHPMLNIAVKAARRAGQIINRASLDLDLIEIRKKQQNDFVTEVDKAAEEAIIETLKTAYPDHAILAEESGESENESEFKW IIDPLDGTTNFIHGFPYYCVSIALEHKGVVTQAVVYDPNKNDLFTATRGRGAYLNDRRIRVGRRDRLADALVGTGFPFRE KDGLDAYARLFTEMTQACTGLRRPGAAALDLANVAAGRLDAFFEQGINVWDMAAGSLLITEAGGLVGNYTGDADFLHRHE IVAANPKIYAQMIPILNRYSRVHPAAE
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=258, Percent_Identity=32.9457364341085, Blast_Score=152, Evalue=3e-37, Organism=Homo sapiens, GI221625487, Length=258, Percent_Identity=32.9457364341085, Blast_Score=152, Evalue=4e-37, Organism=Homo sapiens, GI7657236, Length=252, Percent_Identity=36.1111111111111, Blast_Score=148, Evalue=5e-36, Organism=Homo sapiens, GI221625507, Length=145, Percent_Identity=33.7931034482759, Blast_Score=100, Evalue=2e-21, Organism=Escherichia coli, GI1788882, Length=254, Percent_Identity=50.7874015748031, Blast_Score=259, Evalue=9e-71, Organism=Escherichia coli, GI1790659, Length=130, Percent_Identity=33.8461538461538, Blast_Score=69, Evalue=4e-13, Organism=Caenorhabditis elegans, GI193202572, Length=256, Percent_Identity=32.03125, Blast_Score=142, Evalue=1e-34, Organism=Caenorhabditis elegans, GI193202570, Length=257, Percent_Identity=32.295719844358, Blast_Score=134, Evalue=6e-32, Organism=Saccharomyces cerevisiae, GI6320493, Length=212, Percent_Identity=37.7358490566038, Blast_Score=142, Evalue=5e-35, Organism=Saccharomyces cerevisiae, GI6321836, Length=246, Percent_Identity=30.4878048780488, Blast_Score=115, Evalue=6e-27, Organism=Drosophila melanogaster, GI21357329, Length=263, Percent_Identity=34.6007604562738, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI21357303, Length=223, Percent_Identity=37.219730941704, Blast_Score=149, Evalue=3e-36, Organism=Drosophila melanogaster, GI24664922, Length=264, Percent_Identity=31.8181818181818, Blast_Score=147, Evalue=6e-36, Organism=Drosophila melanogaster, GI24664926, Length=200, Percent_Identity=34, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI21357957, Length=268, Percent_Identity=31.3432835820896, Blast_Score=119, Evalue=3e-27, Organism=Drosophila melanogaster, GI24664918, Length=251, Percent_Identity=33.0677290836653, Blast_Score=116, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 29533; Mature: 29533
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPMLNIAVKAARRAGQIINRASLDLDLIEIRKKQQNDFVTEVDKAAEEAIIETLKTAYP CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DHAILAEESGESENESEFKWIIDPLDGTTNFIHGFPYYCVSIALEHKGVVTQAVVYDPNK CCEEEECCCCCCCCCCCEEEEEECCCCCCHHHHCCHHHHHHHHHHCCCCEEEEEEECCCC NDLFTATRGRGAYLNDRRIRVGRRDRLADALVGTGFPFREKDGLDAYARLFTEMTQACTG CCEEEEECCCCCEECCCEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH LRRPGAAALDLANVAAGRLDAFFEQGINVWDMAAGSLLITEAGGLVGNYTGDADFLHRHE CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCEEEEECCCCEECCCCCHHHHHHCC IVAANPKIYAQMIPILNRYSRVHPAAE EEECCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MHPMLNIAVKAARRAGQIINRASLDLDLIEIRKKQQNDFVTEVDKAAEEAIIETLKTAYP CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DHAILAEESGESENESEFKWIIDPLDGTTNFIHGFPYYCVSIALEHKGVVTQAVVYDPNK CCEEEECCCCCCCCCCCEEEEEECCCCCCHHHHCCHHHHHHHHHHCCCCEEEEEEECCCC NDLFTATRGRGAYLNDRRIRVGRRDRLADALVGTGFPFREKDGLDAYARLFTEMTQACTG CCEEEEECCCCCEECCCEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH LRRPGAAALDLANVAAGRLDAFFEQGINVWDMAAGSLLITEAGGLVGNYTGDADFLHRHE CCCCCHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCEEEEECCCCEECCCCCHHHHHHCC IVAANPKIYAQMIPILNRYSRVHPAAE EEECCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]