| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115352154
Identifier: 115352154
GI number: 115352154
Start: 2311353
End: 2311655
Strand: Direct
Name: 115352154
Synonym: Bamb_2103
Alternate gene names: NA
Gene position: 2311353-2311655 (Clockwise)
Preceding gene: 115352150
Following gene: 115352165
Centisome position: 64.99
GC content: 65.35
Gene sequence:
>303_bases ATGAAACTGTCGATTACCGTCGCCTGCATGCTGAGCGCATGCGTCAGCACCGCCGCGTTCGCGGCGCCTCACCTGACGCC GCAGGAATGCAACGCCTACCCGTTCGTTCACACGCGGCACGAAGTCACGCATGCGGATCTCGTGCGCGAGCTGACCGAAC TCGAGCAGGTCGGCTACGATCCGTCGCACAACAGCCCCTACTATCCCGACGATCTCGACGGCGCGCAGCAGCGGCTCGCC GCCGAATATCGCGCGGACTGCACGCATGCACTGACGGCGGACGCGCACACGGACACGCACTGA
Upstream 100 bases:
>100_bases GCGGGTGAAACATGTTTCATCCGTGCGTCGCCCGCCTGGCTCCGCGCACTGCCTACGCTGACGTCATGCGGCATCGGGCC GCGAATTCAGGAGCCACCGG
Downstream 100 bases:
>100_bases CCGGCGTGCGCGGCGCGCCGAAATGAAAAAAGGCGGCACTCGCGTGCCGCCTTTCCTGCATGAATGCGCATGGAGATCGT CCGTTGCGCAGCGACACCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MKLSITVACMLSACVSTAAFAAPHLTPQECNAYPFVHTRHEVTHADLVRELTELEQVGYDPSHNSPYYPDDLDGAQQRLA AEYRADCTHALTADAHTDTH
Sequences:
>Translated_100_residues MKLSITVACMLSACVSTAAFAAPHLTPQECNAYPFVHTRHEVTHADLVRELTELEQVGYDPSHNSPYYPDDLDGAQQRLA AEYRADCTHALTADAHTDTH >Mature_100_residues MKLSITVACMLSACVSTAAFAAPHLTPQECNAYPFVHTRHEVTHADLVRELTELEQVGYDPSHNSPYYPDDLDGAQQRLA AEYRADCTHALTADAHTDTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11025; Mature: 11025
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLSITVACMLSACVSTAAFAAPHLTPQECNAYPFVHTRHEVTHADLVRELTELEQVGYD CCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC PSHNSPYYPDDLDGAQQRLAAEYRADCTHALTADAHTDTH CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCC >Mature Secondary Structure MKLSITVACMLSACVSTAAFAAPHLTPQECNAYPFVHTRHEVTHADLVRELTELEQVGYD CCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC PSHNSPYYPDDLDGAQQRLAAEYRADCTHALTADAHTDTH CCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA