| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is cls
Identifier: 115352117
GI number: 115352117
Start: 2267147
End: 2268586
Strand: Direct
Name: cls
Synonym: Bamb_2066
Alternate gene names: 115352117
Gene position: 2267147-2268586 (Clockwise)
Preceding gene: 115352116
Following gene: 115352119
Centisome position: 63.75
GC content: 67.36
Gene sequence:
>1440_bases ATGACCCTCGACTGGCTACATCTCGGCACCCTGATCCTGGCCGTTCACGTGCTCGGGATCGTCGCGGCGTGTCACGCGCT CATGAACACGCGCACGTCGCAAGGCGCGATCGCGTGGGCCGTGTCGCTCGCCGCGATGCCGTACCTGACGCTCGTCCCCT ACCTGTTCCTCGGTCGCAGCAAGTTCTCCGGCTACGTCGACGCGCGGCGCCACGAAATGGAAGCGTTGCGCACGCATACG CCGCGCGTGCCGTGGCTCGATGCGGACGCAACCAACGGGCCGGCGGCCGACGCGATCGGCCGCGCTGCGGTGCTCGCGCT CACCCGGCTCGGCGGGATGCCGTTCGTCGGCGGCAATTCGGTGCGCACGCTCGTCAACGGCGATGCGACGTTCGAGGCGA TCCTGTCGGCGATCGACTCGGCGCGCGAATACGTGTTCGTCCAGTTCTTCATCGTGCGCGTCGACGCGCTCGGCCTGATG CTGCGCGACGCGCTGCTCGCCCGCGCGGCAGCCGGCGTGCGCTGCTACCTGCTGTATGACAGCATCGGCTGCTTCGACCT GCCGCACAGCTACGTCGACACGCTGCGCCGCGGCGGCGTCGAGGTCCACCCGTTCGCGACCCACCGCAAGTTCGTCAACC GCTTCCAGCTCAACTTCCGCAATCATCGCAAGATCGTCGTCGTCGACGGCAATCGCGCGTTCGTCGGCGGACACAACGTC GGCGTCGAATATCTCGGCGCGAACCGGCGTCTGTCGCCGTGGCGCGACACCCATATCGAAATCCGCGGCCCGGTGGTGGC CAGCATTCAGTACGTGTTCGCCGAAGACTGGCACTGGGCCACGCAGACGCTTCCGCCGCTCGCCGCGCCGCCGGAGGCGC TGCCCGGCGACGCGATGCATTGCCTCGCCGTACCGATGGGCCCGGCCGACAAGCAGGAAACCGGCTCGCTGTTCTTCGTC GGCGCGATCAACGCCGCGCACGAACGGGTGTGGATCACGACGCCGTATCTCATACCCGACGAAGCGGTGATCGCCGCGCT GAAGCTCGCGGTGATGCGCGGCGTCGATGTGCGCATCCTGATCCCGTGCCGGCGCGACCACTACGTCGTGTTCGAGGCGT CGAAGCTCTATGCGCGCGATCTCATCGACGCAGGCGTCAAGGTGTTCCGCTACCGCCCGGGCTTCCTGCACCAGAAAGTC GTGCTGATCGATCGCATCGCGGCCGCGGTCGGCAGCGCGAATCTCGACAACCGCTCGTTCCGGCTGAACTTCGAAATCAT GGTGCTGACCGTCGATCGCGCGTTCGCCGATGAAGTCGGGGCCATGCTCGACGCCGATTTCGCGCAGTCCTACGAGGTCG ATGCGAACGAGTATCGGCACTCGCCCGCGTGGCGGCGCATCGCCATGCACGTCGCGCGCCTGTTCGCACCCATCCTGTAG
Upstream 100 bases:
>100_bases CCCAACCGTGCGGCACGGCAAACCGCTGTCCCGCACGGTTGGGTAAGATGCGCGTAAGCGGCCGTCGCGCCGCACGACTT CAGGAGTCCGTCACGCGCCC
Downstream 100 bases:
>100_bases CGTCCGTGGCGCCCGCGCGAGCGCCGGGCCGCCGTCGCCCGGATGGCGCCGCCCGCTTTCGCCCCATCCGGCCCGACACC GCGGTCGCGGGCCAGACGCC
Product: cardiolipin synthetase
Products: Biphosphatidylglycerol; Glycerol. [C]
Alternate protein names: CL synthase [H]
Number of amino acids: Translated: 479; Mature: 478
Protein sequence:
>479_residues MTLDWLHLGTLILAVHVLGIVAACHALMNTRTSQGAIAWAVSLAAMPYLTLVPYLFLGRSKFSGYVDARRHEMEALRTHT PRVPWLDADATNGPAADAIGRAAVLALTRLGGMPFVGGNSVRTLVNGDATFEAILSAIDSAREYVFVQFFIVRVDALGLM LRDALLARAAAGVRCYLLYDSIGCFDLPHSYVDTLRRGGVEVHPFATHRKFVNRFQLNFRNHRKIVVVDGNRAFVGGHNV GVEYLGANRRLSPWRDTHIEIRGPVVASIQYVFAEDWHWATQTLPPLAAPPEALPGDAMHCLAVPMGPADKQETGSLFFV GAINAAHERVWITTPYLIPDEAVIAALKLAVMRGVDVRILIPCRRDHYVVFEASKLYARDLIDAGVKVFRYRPGFLHQKV VLIDRIAAAVGSANLDNRSFRLNFEIMVLTVDRAFADEVGAMLDADFAQSYEVDANEYRHSPAWRRIAMHVARLFAPIL
Sequences:
>Translated_479_residues MTLDWLHLGTLILAVHVLGIVAACHALMNTRTSQGAIAWAVSLAAMPYLTLVPYLFLGRSKFSGYVDARRHEMEALRTHT PRVPWLDADATNGPAADAIGRAAVLALTRLGGMPFVGGNSVRTLVNGDATFEAILSAIDSAREYVFVQFFIVRVDALGLM LRDALLARAAAGVRCYLLYDSIGCFDLPHSYVDTLRRGGVEVHPFATHRKFVNRFQLNFRNHRKIVVVDGNRAFVGGHNV GVEYLGANRRLSPWRDTHIEIRGPVVASIQYVFAEDWHWATQTLPPLAAPPEALPGDAMHCLAVPMGPADKQETGSLFFV GAINAAHERVWITTPYLIPDEAVIAALKLAVMRGVDVRILIPCRRDHYVVFEASKLYARDLIDAGVKVFRYRPGFLHQKV VLIDRIAAAVGSANLDNRSFRLNFEIMVLTVDRAFADEVGAMLDADFAQSYEVDANEYRHSPAWRRIAMHVARLFAPIL >Mature_478_residues TLDWLHLGTLILAVHVLGIVAACHALMNTRTSQGAIAWAVSLAAMPYLTLVPYLFLGRSKFSGYVDARRHEMEALRTHTP RVPWLDADATNGPAADAIGRAAVLALTRLGGMPFVGGNSVRTLVNGDATFEAILSAIDSAREYVFVQFFIVRVDALGLML RDALLARAAAGVRCYLLYDSIGCFDLPHSYVDTLRRGGVEVHPFATHRKFVNRFQLNFRNHRKIVVVDGNRAFVGGHNVG VEYLGANRRLSPWRDTHIEIRGPVVASIQYVFAEDWHWATQTLPPLAAPPEALPGDAMHCLAVPMGPADKQETGSLFFVG AINAAHERVWITTPYLIPDEAVIAALKLAVMRGVDVRILIPCRRDHYVVFEASKLYARDLIDAGVKVFRYRPGFLHQKVV LIDRIAAAVGSANLDNRSFRLNFEIMVLTVDRAFADEVGAMLDADFAQSYEVDANEYRHSPAWRRIAMHVARLFAPIL
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=472, Percent_Identity=29.0254237288136, Blast_Score=189, Evalue=5e-49, Organism=Escherichia coli, GI1787007, Length=352, Percent_Identity=30.9659090909091, Blast_Score=129, Evalue=3e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.- [C]
Molecular weight: Translated: 53059; Mature: 52928
Theoretical pI: Translated: 8.46; Mature: 8.46
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDWLHLGTLILAVHVLGIVAACHALMNTRTSQGAIAWAVSLAAMPYLTLVPYLFLGRS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC KFSGYVDARRHEMEALRTHTPRVPWLDADATNGPAADAIGRAAVLALTRLGGMPFVGGNS CCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCC VRTLVNGDATFEAILSAIDSAREYVFVQFFIVRVDALGLMLRDALLARAAAGVRCYLLYD EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEE SIGCFDLPHSYVDTLRRGGVEVHPFATHRKFVNRFQLNFRNHRKIVVVDGNRAFVGGHNV CCCCCCCCHHHHHHHHHCCEEEEECHHHHHHHHHHHCCCCCCCEEEEEECCEEEECCCCC GVEYLGANRRLSPWRDTHIEIRGPVVASIQYVFAEDWHWATQTLPPLAAPPEALPGDAMH CEEEECCCCCCCCCCCCEEEEECCCEEEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCEE CLAVPMGPADKQETGSLFFVGAINAAHERVWITTPYLIPDEAVIAALKLAVMRGVDVRIL EEEECCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE IPCRRDHYVVFEASKLYARDLIDAGVKVFRYRPGFLHQKVVLIDRIAAAVGSANLDNRSF EECCCCCEEEEECHHHHHHHHHHCCHHEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEE RLNFEIMVLTVDRAFADEVGAMLDADFAQSYEVDANEYRHSPAWRRIAMHVARLFAPIL EEEEEEEEEEECHHHHHHHHHHHCCHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TLDWLHLGTLILAVHVLGIVAACHALMNTRTSQGAIAWAVSLAAMPYLTLVPYLFLGRS CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC KFSGYVDARRHEMEALRTHTPRVPWLDADATNGPAADAIGRAAVLALTRLGGMPFVGGNS CCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCC VRTLVNGDATFEAILSAIDSAREYVFVQFFIVRVDALGLMLRDALLARAAAGVRCYLLYD EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEE SIGCFDLPHSYVDTLRRGGVEVHPFATHRKFVNRFQLNFRNHRKIVVVDGNRAFVGGHNV CCCCCCCCHHHHHHHHHCCEEEEECHHHHHHHHHHHCCCCCCCEEEEEECCEEEECCCCC GVEYLGANRRLSPWRDTHIEIRGPVVASIQYVFAEDWHWATQTLPPLAAPPEALPGDAMH CEEEECCCCCCCCCCCCEEEEECCCEEEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCEE CLAVPMGPADKQETGSLFFVGAINAAHERVWITTPYLIPDEAVIAALKLAVMRGVDVRIL EEEECCCCCCCCCCCCEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEE IPCRRDHYVVFEASKLYARDLIDAGVKVFRYRPGFLHQKVVLIDRIAAAVGSANLDNRSF EECCCCCEEEEECHHHHHHHHHHCCHHEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCEE RLNFEIMVLTVDRAFADEVGAMLDADFAQSYEVDANEYRHSPAWRRIAMHVARLFAPIL EEEEEEEEEEECHHHHHHHHHHHCCHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Phosphatidylglycerol [C]
Specific reaction: 2 Phosphatidylglycerol = Biphosphatidylglycerol + Glycerol. [C]
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA