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The map label for this gene is ydiA [C]

Identifier: 115352087

GI number: 115352087

Start: 2230535

End: 2231350

Strand: Direct

Name: ydiA [C]

Synonym: Bamb_2036

Alternate gene names: 115352087

Gene position: 2230535-2231350 (Clockwise)

Preceding gene: 115352083

Following gene: 115352104

Centisome position: 62.72

GC content: 62.99

Gene sequence:

>816_bases
ATGCTGCCTACCGTTTTCATCGTCTCCGACGGCACCGGGATCACTGCCGAAACCTTCGCGCATTCGATCCTCTCCCAGTT
CGACCAGAAATTCCGTCTCGTGCGTCTGCCGTTCGTCGACTCGCTCGAGAAGGCCTATGCGACCGTCGAGAAGATCAACG
ACGCCGCGGTGCACGACGGCCGCCGCGCGATCGTCTTCACGACGCTCGTCGACAGCGAGTCGAACGACATCGTCAAGCGC
TCGAACGCGCTCGTGCTGGACATGTTCCAGCGCTTCGTCGAGCCGCTCGAGCAGGAACTGGAGCTGAAGTCGAGCCACGC
GATGGGCCGCGGCCACCAGAACGCCGATACCGAGGAATACAAGACGCGGATCGAGGCGATCAACTTCTCGCTCGCACACG
ACGACGGTCAGTCGAACCGAAACCTGTCCGAAGCCGACGTGATCCTGGTCGGCGTGTCGCGCAGCGGCAAGACGCCGACG
AGCCTGTATCTCGCGATGCAGTACGGCGTGAAGGCGGCCAACTATCCGCTGATTCCGGAAGACTTCGAGCGCGGCAAGCT
GCCGTCGGCGCTGACACCGCATCGCGACAAGCTGTTCGGACTGTCGATCGATCCGCAGCGCCTGTCGGAGATCCGCAACG
AGCGCCGCCCCGGCAGCAAGTACGCGGCGCCGGAAAACTGCCGCTACGAGATCAACGAGGCCGAGGCGATGATGCGCCGC
GAAGGGATCAAGTGGCTGTCGTCGACGCACAAGTCGATCGAGGAAATCGCGACGACGATCCTGCAGGAAATCCGTCTCGA
CCGGCAGTCGTACTGA

Upstream 100 bases:

>100_bases
ACCGTGCCGGCTGCCGGATGTGGCGCGACCTTGTCTCCGCGTCTGGAGGCGAACCTCCAGCCGCCCGCGCAACCGCCCTT
CACGCTCGACGCCCAGATTC

Downstream 100 bases:

>100_bases
CGACCGGCGCGCCGGCCGCCGTCAGGCCGCCGCCAACAGCAAAAAAGGCCGCATACGCGGCCTTTTTTTCGTGATGCGGG
ATACGCGCGGGCAACGCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MLPTVFIVSDGTGITAETFAHSILSQFDQKFRLVRLPFVDSLEKAYATVEKINDAAVHDGRRAIVFTTLVDSESNDIVKR
SNALVLDMFQRFVEPLEQELELKSSHAMGRGHQNADTEEYKTRIEAINFSLAHDDGQSNRNLSEADVILVGVSRSGKTPT
SLYLAMQYGVKAANYPLIPEDFERGKLPSALTPHRDKLFGLSIDPQRLSEIRNERRPGSKYAAPENCRYEINEAEAMMRR
EGIKWLSSTHKSIEEIATTILQEIRLDRQSY

Sequences:

>Translated_271_residues
MLPTVFIVSDGTGITAETFAHSILSQFDQKFRLVRLPFVDSLEKAYATVEKINDAAVHDGRRAIVFTTLVDSESNDIVKR
SNALVLDMFQRFVEPLEQELELKSSHAMGRGHQNADTEEYKTRIEAINFSLAHDDGQSNRNLSEADVILVGVSRSGKTPT
SLYLAMQYGVKAANYPLIPEDFERGKLPSALTPHRDKLFGLSIDPQRLSEIRNERRPGSKYAAPENCRYEINEAEAMMRR
EGIKWLSSTHKSIEEIATTILQEIRLDRQSY
>Mature_271_residues
MLPTVFIVSDGTGITAETFAHSILSQFDQKFRLVRLPFVDSLEKAYATVEKINDAAVHDGRRAIVFTTLVDSESNDIVKR
SNALVLDMFQRFVEPLEQELELKSSHAMGRGHQNADTEEYKTRIEAINFSLAHDDGQSNRNLSEADVILVGVSRSGKTPT
SLYLAMQYGVKAANYPLIPEDFERGKLPSALTPHRDKLFGLSIDPQRLSEIRNERRPGSKYAAPENCRYEINEAEAMMRR
EGIKWLSSTHKSIEEIATTILQEIRLDRQSY

Specific function: Unknown

COG id: COG1806

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pyruvate, phosphate dikinase regulatory protein family [H]

Homologues:

Organism=Escherichia coli, GI1787995, Length=269, Percent_Identity=46.8401486988848, Blast_Score=250, Evalue=7e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005177 [H]

Pfam domain/function: PF03618 DUF299 [H]

EC number: NA

Molecular weight: Translated: 30648; Mature: 30648

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPTVFIVSDGTGITAETFAHSILSQFDQKFRLVRLPFVDSLEKAYATVEKINDAAVHDG
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHCCC
RRAIVFTTLVDSESNDIVKRSNALVLDMFQRFVEPLEQELELKSSHAMGRGHQNADTEEY
CEEEEEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
KTRIEAINFSLAHDDGQSNRNLSEADVILVGVSRSGKTPTSLYLAMQYGVKAANYPLIPE
HHHHHHHEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHEEEEHHHCCCCCCCCCCCC
DFERGKLPSALTPHRDKLFGLSIDPQRLSEIRNERRPGSKYAAPENCRYEINEAEAMMRR
HHHCCCCCCCCCCCCHHEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHH
EGIKWLSSTHKSIEEIATTILQEIRLDRQSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLPTVFIVSDGTGITAETFAHSILSQFDQKFRLVRLPFVDSLEKAYATVEKINDAAVHDG
CCCEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHCCC
RRAIVFTTLVDSESNDIVKRSNALVLDMFQRFVEPLEQELELKSSHAMGRGHQNADTEEY
CEEEEEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
KTRIEAINFSLAHDDGQSNRNLSEADVILVGVSRSGKTPTSLYLAMQYGVKAANYPLIPE
HHHHHHHEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCHHEEEEHHHCCCCCCCCCCCC
DFERGKLPSALTPHRDKLFGLSIDPQRLSEIRNERRPGSKYAAPENCRYEINEAEAMMRR
HHHCCCCCCCCCCCCHHEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHH
EGIKWLSSTHKSIEEIATTILQEIRLDRQSY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA