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The map label for this gene is ytfF [H]

Identifier: 115352080

GI number: 115352080

Start: 2223604

End: 2224575

Strand: Direct

Name: ytfF [H]

Synonym: Bamb_2029

Alternate gene names: 115352080

Gene position: 2223604-2224575 (Clockwise)

Preceding gene: 115352079

Following gene: 115352083

Centisome position: 62.52

GC content: 70.68

Gene sequence:

>972_bases
ATGCAGCGCGGTGTGGTGTATGGCGTCCTGGCAGGCGCGTTGTGGGGCATGGTGTTTCTCGTGCCGCGGCTGATGACCGA
CTTCTCGCCGCTGCTGCTGAGCGCGGGCCGCTATGCGATGTACGGCCTCGTGTCGCTGGCGGCGGCGTTGCCGGCCGCCC
GCTCGCTGCTCGCGCGGCTGACCCGCGAGGATCTCGTCGCGCTCGTGAAGCTCGCGCTCGTCGGCAACGTCGCGTACTAC
ATGCTGCTGTCCGGCGCGGTGCACCTGATCGGCATCGCGCCCAGCTCGCTGATCGTCGGCGTGCTGCCCGTGACCGTCAC
GCTCGCGGGCCTCGGCGACCATGGCGCGGTGCCGCTGCGGCGGCTCGCCGCGCCGCTCGCGCTGGTGATCGCCGGCATCG
TCTGCATCAACGTCGACCTCTTCACATCGGAAGCCGCGCAGGCGACGACGCTCGGCCAAAAGCTCGCCGGCATCGCGTGC
GCATGCGGCGCGCTGGCAAGCTGGACCTGGTACGCGGTTGCGAACGCGCGCTACCTGCAGCGCCACCATCATTTCGGCGG
CAACGAGTGGTCGGTGCTGTGGGGTGTCGTGACGGGCCTGATCGGCGGTCTCTGCTGGCTCGCGATCCTCGCGCTGCCGG
CCGGCATGGCGCAGGCGGCCGTCCCGACATCGCGCTGGCAGCTGTTCTGGCTGCTGAACCTCGCGCTGGCGATCGGCGCG
TCGTGGCTCGGCAACGGACTGTGGAACGCGGCGTCAAAGCGGCTGCCGCTCACGCTGTCGGGCCAGCTGATCGTGTTCGA
AACCGTGTTCGCGATGCTCTACGCGTTCGTCTACGACCACCGGATGCCGCGCACGCTCGAGATCGCGGCGCTCGCGCTGC
TGCTGGCGGGCGTCTATGCGTCGGTGCGCCGGCACGGCGACACGCACGCGGGAGGCGATACGGCCGGCCGCGCGAACGTT
GCGGCCCACTGA

Upstream 100 bases:

>100_bases
TCCCGAACCTCACCCGCTTCCGAGTGCAGGAATGAACAAGACGCGCTCGCGTCGCCATCGCTAAGATGCGCGCTCGTCAG
TCTTTCGTTCGGAGCAGTCG

Downstream 100 bases:

>100_bases
GCGCGGCCGCGGCTGGCCTGACGAATCGGAACGAAAGTACGGGGGCGACGCTGCAGCAATGCGTCAGCGCGCGTCCTTGT
GCATCCACTTGCGGCCCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MQRGVVYGVLAGALWGMVFLVPRLMTDFSPLLLSAGRYAMYGLVSLAAALPAARSLLARLTREDLVALVKLALVGNVAYY
MLLSGAVHLIGIAPSSLIVGVLPVTVTLAGLGDHGAVPLRRLAAPLALVIAGIVCINVDLFTSEAAQATTLGQKLAGIAC
ACGALASWTWYAVANARYLQRHHHFGGNEWSVLWGVVTGLIGGLCWLAILALPAGMAQAAVPTSRWQLFWLLNLALAIGA
SWLGNGLWNAASKRLPLTLSGQLIVFETVFAMLYAFVYDHRMPRTLEIAALALLLAGVYASVRRHGDTHAGGDTAGRANV
AAH

Sequences:

>Translated_323_residues
MQRGVVYGVLAGALWGMVFLVPRLMTDFSPLLLSAGRYAMYGLVSLAAALPAARSLLARLTREDLVALVKLALVGNVAYY
MLLSGAVHLIGIAPSSLIVGVLPVTVTLAGLGDHGAVPLRRLAAPLALVIAGIVCINVDLFTSEAAQATTLGQKLAGIAC
ACGALASWTWYAVANARYLQRHHHFGGNEWSVLWGVVTGLIGGLCWLAILALPAGMAQAAVPTSRWQLFWLLNLALAIGA
SWLGNGLWNAASKRLPLTLSGQLIVFETVFAMLYAFVYDHRMPRTLEIAALALLLAGVYASVRRHGDTHAGGDTAGRANV
AAH
>Mature_323_residues
MQRGVVYGVLAGALWGMVFLVPRLMTDFSPLLLSAGRYAMYGLVSLAAALPAARSLLARLTREDLVALVKLALVGNVAYY
MLLSGAVHLIGIAPSSLIVGVLPVTVTLAGLGDHGAVPLRRLAAPLALVIAGIVCINVDLFTSEAAQATTLGQKLAGIAC
ACGALASWTWYAVANARYLQRHHHFGGNEWSVLWGVVTGLIGGLCWLAILALPAGMAQAAVPTSRWQLFWLLNLALAIGA
SWLGNGLWNAASKRLPLTLSGQLIVFETVFAMLYAFVYDHRMPRTLEIAALALLLAGVYASVRRHGDTHAGGDTAGRANV
AAH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DUF6 domain [H]

Homologues:

Organism=Escherichia coli, GI226510990, Length=322, Percent_Identity=32.2981366459627, Blast_Score=137, Evalue=8e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34039; Mature: 34039

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRGVVYGVLAGALWGMVFLVPRLMTDFSPLLLSAGRYAMYGLVSLAAALPAARSLLARL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
TREDLVALVKLALVGNVAYYMLLSGAVHLIGIAPSSLIVGVLPVTVTLAGLGDHGAVPLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHEECCCCCCCCHHH
RLAAPLALVIAGIVCINVDLFTSEAAQATTLGQKLAGIACACGALASWTWYAVANARYLQ
HHHHHHHHHHHHHHHHEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHHHFGGNEWSVLWGVVTGLIGGLCWLAILALPAGMAQAAVPTSRWQLFWLLNLALAIGA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHH
SWLGNGLWNAASKRLPLTLSGQLIVFETVFAMLYAFVYDHRMPRTLEIAALALLLAGVYA
HHHHCHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
SVRRHGDTHAGGDTAGRANVAAH
HHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQRGVVYGVLAGALWGMVFLVPRLMTDFSPLLLSAGRYAMYGLVSLAAALPAARSLLARL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
TREDLVALVKLALVGNVAYYMLLSGAVHLIGIAPSSLIVGVLPVTVTLAGLGDHGAVPLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHHEECCCCCCCCHHH
RLAAPLALVIAGIVCINVDLFTSEAAQATTLGQKLAGIACACGALASWTWYAVANARYLQ
HHHHHHHHHHHHHHHHEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHHHFGGNEWSVLWGVVTGLIGGLCWLAILALPAGMAQAAVPTSRWQLFWLLNLALAIGA
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHH
SWLGNGLWNAASKRLPLTLSGQLIVFETVFAMLYAFVYDHRMPRTLEIAALALLLAGVYA
HHHHCHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
SVRRHGDTHAGGDTAGRANVAAH
HHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]