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The map label for this gene is crtB [H]

Identifier: 115351973

GI number: 115351973

Start: 2116982

End: 2117893

Strand: Direct

Name: crtB [H]

Synonym: Bamb_1922

Alternate gene names: 115351973

Gene position: 2116982-2117893 (Clockwise)

Preceding gene: 115351971

Following gene: 115351977

Centisome position: 59.52

GC content: 71.49

Gene sequence:

>912_bases
GTGCTAGAATGCCGCGCTCGACGTGCCGGCCCCGCGCCGGCGCGCGCCCCCGAACCCGCCTCCGCCACGATCCCACCCGT
GAACTTCGACGACTACTGTCAGCAAAAGGCCGCCCCCGCGGGCTCCAGCGTCTACTACGCGCTGCGCCAGGCGCCGCTCG
CCGCCGAACCGCGCCTGACCGCCCTGTTCGCGCTGCGCCGCGAGCTCGAGGAAACCGTCAAGGAAACCAGCGACCCGACC
GTCGGACACACGAAGCTCGCGTGGTGGCACAAGGAGCTCGCGGCGCTCGCCGCCGGCGAACCGTCGCACCCGGTCACGAA
GGCGCTCGCGCAGCACCACCCGGCGATCGCGGCCGAAGCCGACGCACTGCGCACGCTGGTCAACGGTTACGGGATGGATC
TCGAACAAGCGCGCTACCTGGATTTCGCGAACCTGCAACGCTACATCGCGCAGGTCGGCGGCACCTTCGCATCGCTGGTC
GCGCGCGCCAGCGCCGCGAATCCGGCCGACCCGCAGCCGTGGGCCGCGGACGCCGGCCGCGCGCTGATGCTCGCGCAATT
CGTGCAGGAGCTCGGCAACGATGCGCGCCATGGCCGCATCTATCTGCCGATCGACGAACTGCAACGCTACAACGTGACCG
CGGCCGACCTGCTGAACCGTCGCTACAGCCCGGCCTTCACCGAGCTGCTGCAGTTTCAGACGGCCCGCGCGCGCGAAGCG
CTCGCCGCCGCCGACGCAGCGATCCCCGCGTCCGAACGCCGCGCGCAACGCACGCTCCGTGCGCAGATCGCACTGGCCGG
CGCGCTGCTCGACGAAATCGAGCGCGACGGCTACCAGGTGCTGCACCAGCGCATCGCGCTGACGCCGATCCGCAAGCTGT
GGATCGCATGGCGCGCCGCGCGCCGCCGCTGA

Upstream 100 bases:

>100_bases
GCCCGATCAGGCGAGCGCCGGCACGCCCGATCAGGCGAGCGCGAGATTTTACCCGATCTGTGCGGCATTGTCTCGCCCCG
CCGGCGGCCGCCTGACAGCG

Downstream 100 bases:

>100_bases
CCCGCGCCGCAACGCACGACCCTCATCACACCTTCAGCAGCGGCAGCGTGTCGAAGCGCTGCTGCAGCACGCGCGTCGCA
TCGAGTCCCCACCACGGCCC

Product: squalene/phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MLECRARRAGPAPARAPEPASATIPPVNFDDYCQQKAAPAGSSVYYALRQAPLAAEPRLTALFALRRELEETVKETSDPT
VGHTKLAWWHKELAALAAGEPSHPVTKALAQHHPAIAAEADALRTLVNGYGMDLEQARYLDFANLQRYIAQVGGTFASLV
ARASAANPADPQPWAADAGRALMLAQFVQELGNDARHGRIYLPIDELQRYNVTAADLLNRRYSPAFTELLQFQTARAREA
LAAADAAIPASERRAQRTLRAQIALAGALLDEIERDGYQVLHQRIALTPIRKLWIAWRAARRR

Sequences:

>Translated_303_residues
MLECRARRAGPAPARAPEPASATIPPVNFDDYCQQKAAPAGSSVYYALRQAPLAAEPRLTALFALRRELEETVKETSDPT
VGHTKLAWWHKELAALAAGEPSHPVTKALAQHHPAIAAEADALRTLVNGYGMDLEQARYLDFANLQRYIAQVGGTFASLV
ARASAANPADPQPWAADAGRALMLAQFVQELGNDARHGRIYLPIDELQRYNVTAADLLNRRYSPAFTELLQFQTARAREA
LAAADAAIPASERRAQRTLRAQIALAGALLDEIERDGYQVLHQRIALTPIRKLWIAWRAARRR
>Mature_303_residues
MLECRARRAGPAPARAPEPASATIPPVNFDDYCQQKAAPAGSSVYYALRQAPLAAEPRLTALFALRRELEETVKETSDPT
VGHTKLAWWHKELAALAAGEPSHPVTKALAQHHPAIAAEADALRTLVNGYGMDLEQARYLDFANLQRYIAQVGGTFASLV
ARASAANPADPQPWAADAGRALMLAQFVQELGNDARHGRIYLPIDELQRYNVTAADLLNRRYSPAFTELLQFQTARAREA
LAAADAAIPASERRAQRTLRAQIALAGALLDEIERDGYQVLHQRIALTPIRKLWIAWRAARRR

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 33309; Mature: 33309

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLECRARRAGPAPARAPEPASATIPPVNFDDYCQQKAAPAGSSVYYALRQAPLAAEPRLT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHH
ALFALRRELEETVKETSDPTVGHTKLAWWHKELAALAAGEPSHPVTKALAQHHPAIAAEA
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHH
DALRTLVNGYGMDLEQARYLDFANLQRYIAQVGGTFASLVARASAANPADPQPWAADAGR
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCHH
ALMLAQFVQELGNDARHGRIYLPIDELQRYNVTAADLLNRRYSPAFTELLQFQTARAREA
HHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LAAADAAIPASERRAQRTLRAQIALAGALLDEIERDGYQVLHQRIALTPIRKLWIAWRAA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRR
HCC
>Mature Secondary Structure
MLECRARRAGPAPARAPEPASATIPPVNFDDYCQQKAAPAGSSVYYALRQAPLAAEPRLT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHH
ALFALRRELEETVKETSDPTVGHTKLAWWHKELAALAAGEPSHPVTKALAQHHPAIAAEA
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHH
DALRTLVNGYGMDLEQARYLDFANLQRYIAQVGGTFASLVARASAANPADPQPWAADAGR
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCHH
ALMLAQFVQELGNDARHGRIYLPIDELQRYNVTAADLLNRRYSPAFTELLQFQTARAREA
HHHHHHHHHHHCCCCCCCEEEEEHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LAAADAAIPASERRAQRTLRAQIALAGALLDEIERDGYQVLHQRIALTPIRKLWIAWRAA
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRR
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA