Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is glxK [H]

Identifier: 115351964

GI number: 115351964

Start: 2107896

End: 2109041

Strand: Direct

Name: glxK [H]

Synonym: Bamb_1913

Alternate gene names: 115351964

Gene position: 2107896-2109041 (Clockwise)

Preceding gene: 115351958

Following gene: 115351965

Centisome position: 59.27

GC content: 73.82

Gene sequence:

>1146_bases
ATGCCGCACCACCCGTCCGCGCCTGTCGTCGTCATCGCGCCCGATTCGTTCAAAGGCTCGCTTTCCGCCGAGCAGGTCGC
GGACGCGATCGCCACCGGCATCCGCCGCGCCCGGCCCGACGCGGTCGTGCGCTGCTGCCCGATGGCCGACGGCGGCGAAG
GCACGCTCGACGCGATGCTGGCAGGCGGCGGCACGCGGCGTGCGCTGCGGGTGGCCGGCGCGTCGCTCGCGGCACGCGAT
GCGGCGGTGGGCGTGATCGATGCGCGCACCGCGATCGTCGAGACGGCCGAGATCGTCGGCATCACCGATGCGGTCGGCAT
GAGCGTGCCGGTCGACGCGCGCAGCACGCGCGGGATGGGCGAAGCGATCCGCACGCTGCTCGACGAAGGCGTGCGCCGCT
TCTTCGTCGCGCTCGGCGGCAGCAGCACCAACGACGCGGGCGCAGGGTTGCTCGCGGGCCTCGGCCTGCAATGCTTCGAC
GCGGCCGGCCAGCCGGTCGAGCCCGTCCCCGCGCGGCTCGCAAACATTGCGCGGATCGACGCGTCGGCGCTCGATCCGCG
CCTGAAGGAAGCGGAATTCATCGGCATGTCCGACGTCGACAATCCGCTGACGGGCGCGCACGGCGCGACCGCGGTGTTCG
GTCCGCAAAAGGGCGTGGTGCCCGAGCAAGTCGCGACCCTCGATGCCGCGCTCGGCCACTTCGCCGACCTGCTCGAGGCG
GCGCTCGACCGGCGCGGCCGCGACCTGGCCGGTGCCGGCGCCGCGGGCGGCCTGGGTTTTGCGCTGCACATGCTGGGCGC
GCGGTTCGAAGCCGGCGCGGAAGTCGTCGCGCGGCAGGTCGGGCTCGACGCGGCGCTCGCCGGCGCCGACTGGCTGATCA
CCGGCGAAGGCCGCTCCGACGTGCAGACGCTGCACGGCAAGGCGCCGTTCATCGCGTGCCGTCACGCGCAGGCCGCCGGC
GTGCCCGCGTCGCTGTTGTCCGGCGCCGTCGACCCGGCCGCGCTGCCGCGCCTGTCCGAACACTTCGCCGGCTGCTTCTC
GCCCGCACCGGGGCCGATCACGCTCGACGTCGCGATCCGCGACGCGGCGAATCTGCTCGCGAACGAAGCGGAGCAGTTGA
CACGGCTGAAGTACGGCGCACACTGA

Upstream 100 bases:

>100_bases
GACGTATCCACCGCGCGCCCACCATCCTGTAAGCTCCGAATGAGGGTGCGCCGCCGTCGCGCCCCCATTTTTCACACCAA
TTACGCTTCCCGGAGACACC

Downstream 100 bases:

>100_bases
CCGTTGACCCGAGCGCGCGATACAGGAACAATCGGGCCCGCCCTTTTTCTTCAGGATTCGACATGAAAGGCCGTCAAGCC
GGGCTCGATCAGTTTCTGAC

Product: glycerate kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MPHHPSAPVVVIAPDSFKGSLSAEQVADAIATGIRRARPDAVVRCCPMADGGEGTLDAMLAGGGTRRALRVAGASLAARD
AAVGVIDARTAIVETAEIVGITDAVGMSVPVDARSTRGMGEAIRTLLDEGVRRFFVALGGSSTNDAGAGLLAGLGLQCFD
AAGQPVEPVPARLANIARIDASALDPRLKEAEFIGMSDVDNPLTGAHGATAVFGPQKGVVPEQVATLDAALGHFADLLEA
ALDRRGRDLAGAGAAGGLGFALHMLGARFEAGAEVVARQVGLDAALAGADWLITGEGRSDVQTLHGKAPFIACRHAQAAG
VPASLLSGAVDPAALPRLSEHFAGCFSPAPGPITLDVAIRDAANLLANEAEQLTRLKYGAH

Sequences:

>Translated_381_residues
MPHHPSAPVVVIAPDSFKGSLSAEQVADAIATGIRRARPDAVVRCCPMADGGEGTLDAMLAGGGTRRALRVAGASLAARD
AAVGVIDARTAIVETAEIVGITDAVGMSVPVDARSTRGMGEAIRTLLDEGVRRFFVALGGSSTNDAGAGLLAGLGLQCFD
AAGQPVEPVPARLANIARIDASALDPRLKEAEFIGMSDVDNPLTGAHGATAVFGPQKGVVPEQVATLDAALGHFADLLEA
ALDRRGRDLAGAGAAGGLGFALHMLGARFEAGAEVVARQVGLDAALAGADWLITGEGRSDVQTLHGKAPFIACRHAQAAG
VPASLLSGAVDPAALPRLSEHFAGCFSPAPGPITLDVAIRDAANLLANEAEQLTRLKYGAH
>Mature_380_residues
PHHPSAPVVVIAPDSFKGSLSAEQVADAIATGIRRARPDAVVRCCPMADGGEGTLDAMLAGGGTRRALRVAGASLAARDA
AVGVIDARTAIVETAEIVGITDAVGMSVPVDARSTRGMGEAIRTLLDEGVRRFFVALGGSSTNDAGAGLLAGLGLQCFDA
AGQPVEPVPARLANIARIDASALDPRLKEAEFIGMSDVDNPLTGAHGATAVFGPQKGVVPEQVATLDAALGHFADLLEAA
LDRRGRDLAGAGAAGGLGFALHMLGARFEAGAEVVARQVGLDAALAGADWLITGEGRSDVQTLHGKAPFIACRHAQAAGV
PASLLSGAVDPAALPRLSEHFAGCFSPAPGPITLDVAIRDAANLLANEAEQLTRLKYGAH

Specific function: Glyoxylate catabolism. [C]

COG id: COG1929

COG function: function code G; Glycerate kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerate kinase type-1 family [H]

Homologues:

Organism=Escherichia coli, GI1786724, Length=329, Percent_Identity=40.7294832826748, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI145693185, Length=363, Percent_Identity=36.0881542699724, Blast_Score=186, Evalue=3e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018193
- InterPro:   IPR004381 [H]

Pfam domain/function: PF02595 Gly_kinase [H]

EC number: =2.7.1.31 [H]

Molecular weight: Translated: 38548; Mature: 38417

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHHPSAPVVVIAPDSFKGSLSAEQVADAIATGIRRARPDAVVRCCPMADGGEGTLDAML
CCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCCHHHHH
AGGGTRRALRVAGASLAARDAAVGVIDARTAIVETAEIVGITDAVGMSVPVDARSTRGMG
CCCCCHHHHHHHCCHHHHHHHHEEEEHHHHHHHHHHHHEEEHHHCCCCCCCCCHHCCCHH
EAIRTLLDEGVRRFFVALGGSSTNDAGAGLLAGLGLQCFDAAGQPVEPVPARLANIARID
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHC
ASALDPRLKEAEFIGMSDVDNPLTGAHGATAVFGPQKGVVPEQVATLDAALGHFADLLEA
HHHCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
ALDRRGRDLAGAGAAGGLGFALHMLGARFEAGAEVVARQVGLDAALAGADWLITGEGRSD
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEECCCCHH
VQTLHGKAPFIACRHAQAAGVPASLLSGAVDPAALPRLSEHFAGCFSPAPGPITLDVAIR
HHHHCCCCCEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEHH
DAANLLANEAEQLTRLKYGAH
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PHHPSAPVVVIAPDSFKGSLSAEQVADAIATGIRRARPDAVVRCCPMADGGEGTLDAML
CCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHEEECCCCCCCCCCHHHHH
AGGGTRRALRVAGASLAARDAAVGVIDARTAIVETAEIVGITDAVGMSVPVDARSTRGMG
CCCCCHHHHHHHCCHHHHHHHHEEEEHHHHHHHHHHHHEEEHHHCCCCCCCCCHHCCCHH
EAIRTLLDEGVRRFFVALGGSSTNDAGAGLLAGLGLQCFDAAGQPVEPVPARLANIARID
HHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHC
ASALDPRLKEAEFIGMSDVDNPLTGAHGATAVFGPQKGVVPEQVATLDAALGHFADLLEA
HHHCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHH
ALDRRGRDLAGAGAAGGLGFALHMLGARFEAGAEVVARQVGLDAALAGADWLITGEGRSD
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEECCCCHH
VQTLHGKAPFIACRHAQAAGVPASLLSGAVDPAALPRLSEHFAGCFSPAPGPITLDVAIR
HHHHCCCCCEEEECCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEHH
DAANLLANEAEQLTRLKYGAH
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377; 3020045 [H]