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The map label for this gene is arnC [H]

Identifier: 115351849

GI number: 115351849

Start: 1986870

End: 1987904

Strand: Direct

Name: arnC [H]

Synonym: Bamb_1798

Alternate gene names: 115351849

Gene position: 1986870-1987904 (Clockwise)

Preceding gene: 115351848

Following gene: 115351850

Centisome position: 55.87

GC content: 66.09

Gene sequence:

>1035_bases
ATGAATCACCTTGAAGCACGCGCCGGGCATCCGGGCGCCGGGCATCCGGGCGCCGCGAACCCGGAGGTATCGGTCATCAT
CCCCGTGTACAACGAGGAAGAGGGCCTGGCTGCGCTGTTCGCGCGGCTCTACCCGGCACTCGACGCACTCGGCACGTCGT
ACGAAGTGATCCTGATCAACGACGGCAGCCGCGACCGCTCGGCCGCGATGCTCGCGGACCAGTTCCACGTGCGTCCCGAC
ACGACGCGCGTCGTGCTGCTCAACGGCAACTACGGTCAGCACATGGCGATCCTCGCCGGCTTCGCGCAGTCGCACGGCGA
CATCGTCATCACGCTCGATGCCGACCTGCAGAACCCGCCGGAGGAAATCGGCAAGCTGATCGAGAAGATGCGCGAGGGCT
ACGACTACGTCGGCTCGATCCGCAAGCAGCGTCAGGACAGCCTGTGGCGGCGCAAGGCGTCGCAGATGATGAACCGGCTG
CGCGAGCGCATCACGCGGATCAAGATGACCGACCAGGGCTGCATGCTGCGCGCGTACAGCCGCCGCATCATCGACACGAT
CAACGTGTGCGGCGAGGTCAACACGTTCATCCCCGCGCTCGCGTACACGTTCGCGCAGAACCCGACCGAAATCGAGGTCG
CGCACGAGGAGCGCTTCGCGGGCGAGTCGAAGTACTCGCTGTACAGCCTGATCCGGCTGAACTTCGACCTCGTGACGGGC
TTCTCGGTCGTGCCGCTGCAGTGGCTGTCGTTCATCGGCGTGATCCTGTCGCTCGGCTCCGCCGCGCTGTTCGTGCTGCT
GCTCGTGCGCCGCTTCATCGTCGGCGCGGAAGTGCAAGGCGTGTTCACGCTGTTCGCGATCACGTTCTTCCTGCTCGGCG
TGATCATCTTCGCGCTCGGCCTGCTCGGCGAATACGTCGGCCGCATCTACCAGCAGGTGCGTGCGCGGCCGCGCTACCTG
ATCCAGGCCGTGCTCGAACAGCACGACGGCATCCCGGCGGTGCCGGGCATGAACCGCTCGGAGGCCGCGCAATGA

Upstream 100 bases:

>100_bases
CGTCACGCTGCCGCTCTTCACGCAGATGACCGAAGACGACGTGCGTCGCGTGGCCGACGCCATCAACCAGATTTGCGATC
AATACGGAAAATAAGCGTAC

Downstream 100 bases:

>100_bases
AGCCGCGCGCCGTCGTCTTCGCGTATCACAACGTCGGCGTGCGCTGCCTGCAGGTGCTGCTGGCACGCGGTGTCGACGTC
GCGCTCGTCGTCACGCACGA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MNHLEARAGHPGAGHPGAANPEVSVIIPVYNEEEGLAALFARLYPALDALGTSYEVILINDGSRDRSAAMLADQFHVRPD
TTRVVLLNGNYGQHMAILAGFAQSHGDIVITLDADLQNPPEEIGKLIEKMREGYDYVGSIRKQRQDSLWRRKASQMMNRL
RERITRIKMTDQGCMLRAYSRRIIDTINVCGEVNTFIPALAYTFAQNPTEIEVAHEERFAGESKYSLYSLIRLNFDLVTG
FSVVPLQWLSFIGVILSLGSAALFVLLLVRRFIVGAEVQGVFTLFAITFFLLGVIIFALGLLGEYVGRIYQQVRARPRYL
IQAVLEQHDGIPAVPGMNRSEAAQ

Sequences:

>Translated_344_residues
MNHLEARAGHPGAGHPGAANPEVSVIIPVYNEEEGLAALFARLYPALDALGTSYEVILINDGSRDRSAAMLADQFHVRPD
TTRVVLLNGNYGQHMAILAGFAQSHGDIVITLDADLQNPPEEIGKLIEKMREGYDYVGSIRKQRQDSLWRRKASQMMNRL
RERITRIKMTDQGCMLRAYSRRIIDTINVCGEVNTFIPALAYTFAQNPTEIEVAHEERFAGESKYSLYSLIRLNFDLVTG
FSVVPLQWLSFIGVILSLGSAALFVLLLVRRFIVGAEVQGVFTLFAITFFLLGVIIFALGLLGEYVGRIYQQVRARPRYL
IQAVLEQHDGIPAVPGMNRSEAAQ
>Mature_344_residues
MNHLEARAGHPGAGHPGAANPEVSVIIPVYNEEEGLAALFARLYPALDALGTSYEVILINDGSRDRSAAMLADQFHVRPD
TTRVVLLNGNYGQHMAILAGFAQSHGDIVITLDADLQNPPEEIGKLIEKMREGYDYVGSIRKQRQDSLWRRKASQMMNRL
RERITRIKMTDQGCMLRAYSRRIIDTINVCGEVNTFIPALAYTFAQNPTEIEVAHEERFAGESKYSLYSLIRLNFDLVTG
FSVVPLQWLSFIGVILSLGSAALFVLLLVRRFIVGAEVQGVFTLFAITFFLLGVIIFALGLLGEYVGRIYQQVRARPRYL
IQAVLEQHDGIPAVPGMNRSEAAQ

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=238, Percent_Identity=26.4705882352941, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI1788588, Length=306, Percent_Identity=51.9607843137255, Blast_Score=316, Evalue=2e-87,
Organism=Escherichia coli, GI1788692, Length=309, Percent_Identity=29.4498381877023, Blast_Score=158, Evalue=4e-40,
Organism=Saccharomyces cerevisiae, GI6325441, Length=147, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24585265, Length=250, Percent_Identity=24.4, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 38295; Mature: 38295

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHLEARAGHPGAGHPGAANPEVSVIIPVYNEEEGLAALFARLYPALDALGTSYEVILIN
CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEE
DGSRDRSAAMLADQFHVRPDTTRVVLLNGNYGQHMAILAGFAQSHGDIVITLDADLQNPP
CCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCH
EEIGKLIEKMREGYDYVGSIRKQRQDSLWRRKASQMMNRLRERITRIKMTDQGCMLRAYS
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
RRIIDTINVCGEVNTFIPALAYTFAQNPTEIEVAHEERFAGESKYSLYSLIRLNFDLVTG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHHHCC
FSVVPLQWLSFIGVILSLGSAALFVLLLVRRFIVGAEVQGVFTLFAITFFLLGVIIFALG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LLGEYVGRIYQQVRARPRYLIQAVLEQHDGIPAVPGMNRSEAAQ
HHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCHHCCCC
>Mature Secondary Structure
MNHLEARAGHPGAGHPGAANPEVSVIIPVYNEEEGLAALFARLYPALDALGTSYEVILIN
CCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEE
DGSRDRSAAMLADQFHVRPDTTRVVLLNGNYGQHMAILAGFAQSHGDIVITLDADLQNPP
CCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEEEEECCCCCCH
EEIGKLIEKMREGYDYVGSIRKQRQDSLWRRKASQMMNRLRERITRIKMTDQGCMLRAYS
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
RRIIDTINVCGEVNTFIPALAYTFAQNPTEIEVAHEERFAGESKYSLYSLIRLNFDLVTG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCHHHHHHHHHHHHHHHCC
FSVVPLQWLSFIGVILSLGSAALFVLLLVRRFIVGAEVQGVFTLFAITFFLLGVIIFALG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LLGEYVGRIYQQVRARPRYLIQAVLEQHDGIPAVPGMNRSEAAQ
HHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA