Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351847

Identifier: 115351847

GI number: 115351847

Start: 1985191

End: 1985562

Strand: Direct

Name: 115351847

Synonym: Bamb_1796

Alternate gene names: NA

Gene position: 1985191-1985562 (Clockwise)

Preceding gene: 115351846

Following gene: 115351848

Centisome position: 55.82

GC content: 62.63

Gene sequence:

>372_bases
ATGAATCCCGTTTCGCTCGTCTGCATCGTCACCGGCGTGATGCTCAACGCCTGTGCGCAACTTCTGCTGAAAGCCGGCGT
CAACGCAGTTGGACACTTCGAATTCAGCCGCGCGAACATCATCCCGGTCGGCCTGAAGATCGCGACCCAGTTGCCGATCA
TCGGCGGCCTCGCCTGCTACGTGCTGAGCGTCGTCGTGTGGATTGTCGGGCTGTCGCGGGTCGACGTGTCGATCGCGTAT
CCGATGCTGTCGCTCGGCTACGTGGTCAACGCGTTCGCAGCGTGGTACCTGTTCGGCGAAGTGCTGTCGGTCCAGCGGCT
CGTCGGGATCGGCATCATCCTGATCGGCGTGCTCGTGCTCGCGCGCAGTTGA

Upstream 100 bases:

>100_bases
TACGACACGCTGGTCAAGCAAGGCGTGCCGATGCGCGTGATCGCGCGCGACAACCGCCGCGTGATCGTCGAGAAACCGCA
ATCGTAAGGACGTCCACCGC

Downstream 100 bases:

>100_bases
GCGTGCCCGGCGGGCCCGGGTGCACCCACACGCATTAAGCGTCCGCCTACAAAAAATCACGGTACGAATCCGCCAACCGG
TGTTTAATGCCGGTTTCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Small Multidrug Resistance Transmembrane Protein; QuateRNAry Ammonium Compound-Resistance Protein

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MNPVSLVCIVTGVMLNACAQLLLKAGVNAVGHFEFSRANIIPVGLKIATQLPIIGGLACYVLSVVVWIVGLSRVDVSIAY
PMLSLGYVVNAFAAWYLFGEVLSVQRLVGIGIILIGVLVLARS

Sequences:

>Translated_123_residues
MNPVSLVCIVTGVMLNACAQLLLKAGVNAVGHFEFSRANIIPVGLKIATQLPIIGGLACYVLSVVVWIVGLSRVDVSIAY
PMLSLGYVVNAFAAWYLFGEVLSVQRLVGIGIILIGVLVLARS
>Mature_123_residues
MNPVSLVCIVTGVMLNACAQLLLKAGVNAVGHFEFSRANIIPVGLKIATQLPIIGGLACYVLSVVVWIVGLSRVDVSIAY
PMLSLGYVVNAFAAWYLFGEVLSVQRLVGIGIILIGVLVLARS

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12983; Mature: 12983

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPVSLVCIVTGVMLNACAQLLLKAGVNAVGHFEFSRANIIPVGLKIATQLPIIGGLACY
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEECCCCEEEEHHHHHHHCCHHHHHHHH
VLSVVVWIVGLSRVDVSIAYPMLSLGYVVNAFAAWYLFGEVLSVQRLVGIGIILIGVLVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARS
HCC
>Mature Secondary Structure
MNPVSLVCIVTGVMLNACAQLLLKAGVNAVGHFEFSRANIIPVGLKIATQLPIIGGLACY
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCEECCCCEEEEHHHHHHHCCHHHHHHHH
VLSVVVWIVGLSRVDVSIAYPMLSLGYVVNAFAAWYLFGEVLSVQRLVGIGIILIGVLVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARS
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA