| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115351637
Identifier: 115351637
GI number: 115351637
Start: 1754297
End: 1755238
Strand: Direct
Name: 115351637
Synonym: Bamb_1584
Alternate gene names: NA
Gene position: 1754297-1755238 (Clockwise)
Preceding gene: 115351633
Following gene: 115351638
Centisome position: 49.33
GC content: 73.89
Gene sequence:
>942_bases ATGTATCGCCATCTGCTCGTGACGGTCGACGGCGTGCCCGGCGGCATCGACGCGATCGGCCATGCGCTCGAACTGGCGCG TGCGGTCGGCGCGCGGGTCACGTTCGTGCTGTCGGGCACCGTGCCCGACTCGCGTTTATCCGGAGCGCGGATGCCGCGAC ACGATGCGAAAGTGGAAGCCGCCGCGCGGGCGCAGGGCCTGTCCCATGTGATCGCGGGGGGCGGCCATCCGGGGGCCGGC AACCCGGGGGCAGGCCAACCGGCGGCCGGCGACACGTCGCCCGCCACGCTCGCCGGCCAGCTCGGCTGCGACCTGATCGG CGTGGCGGCGCTGCCGCACGACGCAAATGCTGCGGCAGCCGCGCAACGGCTTGAACTGCTCGCGACGAGCAGCGTGCCGG TGCTCGTGTGCCCGGCGCGGCATGGGCCGGCCGAGGCGCGCGTGATGGCCCGCTGTCTCGCCGCGCATCGTGCGCTCGGC GAGCGGTTGGAGGCGCTGATGATGGCAAGCGGAGGCCCCGACGCTGCCGAGCACCCGACGGCCGACACGGGAGGCACGCT GGCCGCACTGGCATCGCTCGCGGCGCTGCAGCACTCACGCTTCGGCACTGACGCTGAAGCCCGTCTCTGCTCGGCATTGC GCATCCGGGCGCAGAGCACCGCGGCCGAACTCGACGAGCTCGATCGCCAGCGGCGCCGCGATGCGCACGCGCTCGACGCG CTGGCGCGGCTCGCCGCCGACGGGTTGCCGTCGAGCGCGTTCGATGCCGCGCTCGCCGTCTATGCGCGTGGCGCATTCGA GCAGATGGGACGCATGGAAGGCGTGATTTTCCCGGCCGCGCGGCGCTATCTGGCCGACGCCGACTGGACCGAACTGGACG CGCCCCCGGCGAGCGGCGCCGCCGCGACGCCACCGGGCGCGGACGAACCCGACGATGCGTGA
Upstream 100 bases:
>100_bases ACGAATGCAACTCACCCATGCAACGAGGAGTGGACCATGAACATCGTATCGACCGGCGCGCGACCGAGCGTGCCGAACGC CGGATAAGCGGAGCGACACG
Downstream 100 bases:
>100_bases CGCGCATCCGACTGAATACCTACGGAGAACAACATGGCACATGCAGTGCGATTCCACGAAACCGGCGGCCCCGACGTGCT GCGCTGGGAAGAAGTCGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MYRHLLVTVDGVPGGIDAIGHALELARAVGARVTFVLSGTVPDSRLSGARMPRHDAKVEAAARAQGLSHVIAGGGHPGAG NPGAGQPAAGDTSPATLAGQLGCDLIGVAALPHDANAAAAAQRLELLATSSVPVLVCPARHGPAEARVMARCLAAHRALG ERLEALMMASGGPDAAEHPTADTGGTLAALASLAALQHSRFGTDAEARLCSALRIRAQSTAAELDELDRQRRRDAHALDA LARLAADGLPSSAFDAALAVYARGAFEQMGRMEGVIFPAARRYLADADWTELDAPPASGAAATPPGADEPDDA
Sequences:
>Translated_313_residues MYRHLLVTVDGVPGGIDAIGHALELARAVGARVTFVLSGTVPDSRLSGARMPRHDAKVEAAARAQGLSHVIAGGGHPGAG NPGAGQPAAGDTSPATLAGQLGCDLIGVAALPHDANAAAAAQRLELLATSSVPVLVCPARHGPAEARVMARCLAAHRALG ERLEALMMASGGPDAAEHPTADTGGTLAALASLAALQHSRFGTDAEARLCSALRIRAQSTAAELDELDRQRRRDAHALDA LARLAADGLPSSAFDAALAVYARGAFEQMGRMEGVIFPAARRYLADADWTELDAPPASGAAATPPGADEPDDA >Mature_313_residues MYRHLLVTVDGVPGGIDAIGHALELARAVGARVTFVLSGTVPDSRLSGARMPRHDAKVEAAARAQGLSHVIAGGGHPGAG NPGAGQPAAGDTSPATLAGQLGCDLIGVAALPHDANAAAAAQRLELLATSSVPVLVCPARHGPAEARVMARCLAAHRALG ERLEALMMASGGPDAAEHPTADTGGTLAALASLAALQHSRFGTDAEARLCSALRIRAQSTAAELDELDRQRRRDAHALDA LARLAADGLPSSAFDAALAVYARGAFEQMGRMEGVIFPAARRYLADADWTELDAPPASGAAATPPGADEPDDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31741; Mature: 31741
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRHLLVTVDGVPGGIDAIGHALELARAVGARVTFVLSGTVPDSRLSGARMPRHDAKVEA CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHCCCCCCCCHHHHHHH AARAQGLSHVIAGGGHPGAGNPGAGQPAAGDTSPATLAGQLGCDLIGVAALPHDANAAAA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEHCCCCCCCCHHHH AQRLELLATSSVPVLVCPARHGPAEARVMARCLAAHRALGERLEALMMASGGPDAAEHPT HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC ADTGGTLAALASLAALQHSRFGTDAEARLCSALRIRAQSTAAELDELDRQRRRDAHALDA CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LARLAADGLPSSAFDAALAVYARGAFEQMGRMEGVIFPAARRYLADADWTELDAPPASGA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECHHHHHHHCCCCCCCCCCCCCCCC AATPPGADEPDDA CCCCCCCCCCCCC >Mature Secondary Structure MYRHLLVTVDGVPGGIDAIGHALELARAVGARVTFVLSGTVPDSRLSGARMPRHDAKVEA CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEEECCCCCHHCCCCCCCCHHHHHHH AARAQGLSHVIAGGGHPGAGNPGAGQPAAGDTSPATLAGQLGCDLIGVAALPHDANAAAA HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCEEEHCCCCCCCCHHHH AQRLELLATSSVPVLVCPARHGPAEARVMARCLAAHRALGERLEALMMASGGPDAAEHPT HHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC ADTGGTLAALASLAALQHSRFGTDAEARLCSALRIRAQSTAAELDELDRQRRRDAHALDA CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LARLAADGLPSSAFDAALAVYARGAFEQMGRMEGVIFPAARRYLADADWTELDAPPASGA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECHHHHHHHCCCCCCCCCCCCCCCC AATPPGADEPDDA CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA