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The map label for this gene is fecI [C]

Identifier: 115351582

GI number: 115351582

Start: 1680959

End: 1681627

Strand: Direct

Name: fecI [C]

Synonym: Bamb_1529

Alternate gene names: 115351582

Gene position: 1680959-1681627 (Clockwise)

Preceding gene: 115351579

Following gene: 115351583

Centisome position: 47.26

GC content: 70.25

Gene sequence:

>669_bases
ATGGCAATGGCGGAAGTGCTCGAACGCCCGGCAGCGGCAATGGCGAACCCGTTCCTCGGCAGTTATCCGGACCTGCCGTC
GCGCCCCGCGCCGCGTGCGCGTCGTGCCAAGGAACCGCGTGCGCAGGGCGCGCTGCTCGACGTGCTGATTGCCCATCGCG
CGATGCTCGTCAACGTAGCGCGCGGCTTCGTCGGCTGCGCGAGCCGCGCCGAGGACGTCGTCCACGACGTGTTCGTGAAG
CTCGTCGAATTCCCGAACCAGGACGCGGTGCGCCAGCCGGTCGCGTACGTGACGCGGATGGTGCGCAACGCATCGATCGA
CGCGTGCCGCCGGCAAAGCCTCGAGAACGTCTATCACACGGAAGAGGACGACGGCTTCGACGTGCCGTCGCCGGAACCGA
CGCCCGAGGCCGCGCTGATGACGCGCGACACGCTGCGCCGCGTATGGGCCGCGCTCGACGATCTGCCGGCGCGCAGCCGC
GCGGCGTTCGAGATGGTGCGGCTGCGCGAGGAGACGCTGCAGACCGCGGCGCGCGCATTGAACGTGTCGCAGACGCTGGT
GCATTTCATGGTGCGCGACGCGGAGCGGCACTGCGCGGAGTGTCTCGACGCGTGCCATCGCGGCGTCGCGTGTCCGGTGT
TTCTCGGCGGTCGCGCACGGCGCCGGTAA

Upstream 100 bases:

>100_bases
GACAAATCCGGATAACCGAAAGGGGTATTCGGTAATCGGATTGAGAATGATTTGCGTTTACGTTAAATTGCCTTATCTCG
GAATTCGACGGAGCAGATCG

Downstream 100 bases:

>100_bases
AAAATCGCGCCGGCCAATCGTCTTCAAGACAGGAGCGGCCGATTCGACAGTTCGCCGCTTCGCTTCCTTCAACCGTCTCC
CGCTTTTTTCCGATCATGAC

Product: extracytoplasmic-function sigma-70 factor

Products: NA

Alternate protein names: Extracytoplasmic-Function Sigma-70 Factor; Extracytoplasmic-Function Sigma-70 Factor PvdS; RNA Polymerase Sigma Factor Sigma-70 Family; Sigma-; RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Family Protein; ECF Subfamily RNA Polymerase Sigma-70 Factor; RNA Polymerase Sigma-24 Subunit ECF Subfamily; Sigma Factor; RNA Polymerase Sigma Factor FECI Protein; Ferric Regulator Sigma-24 Subunit; DNA-Directed RNA Polymerase Sigma-E/Sigma-24/FecI; FecI Like Protein; RNA Polymerase Sigma Factor Protein; ECF Family RNA Polymerase Sigma Factor

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MAMAEVLERPAAAMANPFLGSYPDLPSRPAPRARRAKEPRAQGALLDVLIAHRAMLVNVARGFVGCASRAEDVVHDVFVK
LVEFPNQDAVRQPVAYVTRMVRNASIDACRRQSLENVYHTEEDDGFDVPSPEPTPEAALMTRDTLRRVWAALDDLPARSR
AAFEMVRLREETLQTAARALNVSQTLVHFMVRDAERHCAECLDACHRGVACPVFLGGRARRR

Sequences:

>Translated_222_residues
MAMAEVLERPAAAMANPFLGSYPDLPSRPAPRARRAKEPRAQGALLDVLIAHRAMLVNVARGFVGCASRAEDVVHDVFVK
LVEFPNQDAVRQPVAYVTRMVRNASIDACRRQSLENVYHTEEDDGFDVPSPEPTPEAALMTRDTLRRVWAALDDLPARSR
AAFEMVRLREETLQTAARALNVSQTLVHFMVRDAERHCAECLDACHRGVACPVFLGGRARRR
>Mature_221_residues
AMAEVLERPAAAMANPFLGSYPDLPSRPAPRARRAKEPRAQGALLDVLIAHRAMLVNVARGFVGCASRAEDVVHDVFVKL
VEFPNQDAVRQPVAYVTRMVRNASIDACRRQSLENVYHTEEDDGFDVPSPEPTPEAALMTRDTLRRVWAALDDLPARSRA
AFEMVRLREETLQTAARALNVSQTLVHFMVRDAERHCAECLDACHRGVACPVFLGGRARRR

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24713; Mature: 24581

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMAEVLERPAAAMANPFLGSYPDLPSRPAPRARRAKEPRAQGALLDVLIAHRAMLVNVA
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
RGFVGCASRAEDVVHDVFVKLVEFPNQDAVRQPVAYVTRMVRNASIDACRRQSLENVYHT
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
EEDDGFDVPSPEPTPEAALMTRDTLRRVWAALDDLPARSRAAFEMVRLREETLQTAARAL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
NVSQTLVHFMVRDAERHCAECLDACHRGVACPVFLGGRARRR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECCCCCCC
>Mature Secondary Structure 
AMAEVLERPAAAMANPFLGSYPDLPSRPAPRARRAKEPRAQGALLDVLIAHRAMLVNVA
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
RGFVGCASRAEDVVHDVFVKLVEFPNQDAVRQPVAYVTRMVRNASIDACRRQSLENVYHT
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
EEDDGFDVPSPEPTPEAALMTRDTLRRVWAALDDLPARSRAAFEMVRLREETLQTAARAL
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
NVSQTLVHFMVRDAERHCAECLDACHRGVACPVFLGGRARRR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA