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The map label for this gene is rbsK [H]

Identifier: 115351560

GI number: 115351560

Start: 1651170

End: 1652096

Strand: Direct

Name: rbsK [H]

Synonym: Bamb_1507

Alternate gene names: 115351560

Gene position: 1651170-1652096 (Clockwise)

Preceding gene: 115351559

Following gene: 115351561

Centisome position: 46.43

GC content: 76.05

Gene sequence:

>927_bases
ATGACGGCGCGCACGACGGGCGCCGGCCGCGTGACGGTGGTCGGCAGCCTCAACATGGATCTCGTCGTGCGGGCGCCGCG
GCTGCCGCTGCCGGGCGAAACGCTCGCCGGCCATGCCTACGCGCAGGCGGCGGGCGGCAAGGGCGGCAACCAGGCCGTCG
CGGCCGCGCGCCTCGGCGCGCAGGTCACGATGATCGGCTGCGTCGGCGCGGACGCGCACGGCGCAGCGCTGCGGGCCGGC
CTCGAGGCCGAAGGCATCGATTGCGCGCGGCTCGCGACGAGCGCGGCGGCGTCGACCGGTGTCGCGCTGATCGTCGTCGA
CGACGCGAGCCAGAACACGATCGTGATCGTCGCCGGCGGCAATGGCGAAGTCACGCCGGAGACGGTGGCGCGGCACGAGG
CCGCGCTGGCCGCGACCGACGTGCTGATCTGCCAGCTCGAGACGCCGCCGGACGCCGTGTTCGCGGCGCTGTCGGCTGGC
CGGCGGCTCGGCCGCACGGTGGTGCTCAATCCGGCGCCCGCGGTCGCGCCGCTGCCGGACGGCTGGCTGCCGCTGGTCGA
TTACCTGATCCCGAACGAAGTGGAGGCGGCCGCGCTCACCGGGCTGCCGGTGCGCGACCCGGCCGACGCAGAAGCCGCGG
CGCGGATGCTGCAGGCGGGCGGCGCGCGCAACGTGCTGATCACGCTCGGCGCGCGCGGCGTGCTCGCGCTGTCGGCCGAC
GGCGCGGCGCGCCACTATCCGGCGCCCGTCGTGCAGGCGATCGACACGACCGCGGCCGGCGATACCTTCATCGGCGGTTT
CGCCGCGCGGCTCGCCGCGGGGGAAGACGTCGATACCGCGATCCGCTTCGCGCAACGCGCGGCGGCGCTGTCGGTCACGC
GCGCGGGCGCGCAGCCGTCGATTCCCACCCTCGCCGAACTGGCCTGA

Upstream 100 bases:

>100_bases
CGACCGCTGCGCCGAGCCGTCGCCGCGTCGTGTCGCCGCGCCTCGTGCTGCGCGAATCCACGGCGATCTACCGCGAGCCG
GCCGCGCCCGGCGCTCGCGC

Downstream 100 bases:

>100_bases
CAGGCCGCGGCGCGCATCGTGGCCGGCGCCTGCGACAGCAGGCGGCCGGCTGTCTGGCGGTCTCTTTCTGATCGGCCCGA
AGCCGACATTCGCTTTGTCA

Product: ribokinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MTARTTGAGRVTVVGSLNMDLVVRAPRLPLPGETLAGHAYAQAAGGKGGNQAVAAARLGAQVTMIGCVGADAHGAALRAG
LEAEGIDCARLATSAAASTGVALIVVDDASQNTIVIVAGGNGEVTPETVARHEAALAATDVLICQLETPPDAVFAALSAG
RRLGRTVVLNPAPAVAPLPDGWLPLVDYLIPNEVEAAALTGLPVRDPADAEAAARMLQAGGARNVLITLGARGVLALSAD
GAARHYPAPVVQAIDTTAAGDTFIGGFAARLAAGEDVDTAIRFAQRAAALSVTRAGAQPSIPTLAELA

Sequences:

>Translated_308_residues
MTARTTGAGRVTVVGSLNMDLVVRAPRLPLPGETLAGHAYAQAAGGKGGNQAVAAARLGAQVTMIGCVGADAHGAALRAG
LEAEGIDCARLATSAAASTGVALIVVDDASQNTIVIVAGGNGEVTPETVARHEAALAATDVLICQLETPPDAVFAALSAG
RRLGRTVVLNPAPAVAPLPDGWLPLVDYLIPNEVEAAALTGLPVRDPADAEAAARMLQAGGARNVLITLGARGVLALSAD
GAARHYPAPVVQAIDTTAAGDTFIGGFAARLAAGEDVDTAIRFAQRAAALSVTRAGAQPSIPTLAELA
>Mature_307_residues
TARTTGAGRVTVVGSLNMDLVVRAPRLPLPGETLAGHAYAQAAGGKGGNQAVAAARLGAQVTMIGCVGADAHGAALRAGL
EAEGIDCARLATSAAASTGVALIVVDDASQNTIVIVAGGNGEVTPETVARHEAALAATDVLICQLETPPDAVFAALSAGR
RLGRTVVLNPAPAVAPLPDGWLPLVDYLIPNEVEAAALTGLPVRDPADAEAAARMLQAGGARNVLITLGARGVLALSADG
AARHYPAPVVQAIDTTAAGDTFIGGFAARLAAGEDVDTAIRFAQRAAALSVTRAGAQPSIPTLAELA

Specific function: Ribose metabolism; first step. [C]

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Homo sapiens, GI11545855, Length=296, Percent_Identity=40.2027027027027, Blast_Score=187, Evalue=8e-48,
Organism=Escherichia coli, GI1790193, Length=301, Percent_Identity=45.1827242524917, Blast_Score=210, Evalue=9e-56,
Organism=Escherichia coli, GI87082343, Length=293, Percent_Identity=32.0819112627986, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI87081971, Length=322, Percent_Identity=24.5341614906832, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1788484, Length=321, Percent_Identity=25.5451713395639, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17532905, Length=300, Percent_Identity=40, Blast_Score=196, Evalue=1e-50,
Organism=Saccharomyces cerevisiae, GI6319884, Length=341, Percent_Identity=31.9648093841642, Blast_Score=145, Evalue=1e-35,
Organism=Saccharomyces cerevisiae, GI6322565, Length=276, Percent_Identity=28.9855072463768, Blast_Score=77, Evalue=4e-15,
Organism=Drosophila melanogaster, GI20128807, Length=301, Percent_Identity=39.202657807309, Blast_Score=168, Evalue=4e-42,
Organism=Drosophila melanogaster, GI24583886, Length=298, Percent_Identity=33.8926174496644, Blast_Score=142, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR011877
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.15 [H]

Molecular weight: Translated: 30599; Mature: 30468

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARTTGAGRVTVVGSLNMDLVVRAPRLPLPGETLAGHAYAQAAGGKGGNQAVAAARLGA
CCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHCCC
QVTMIGCVGADAHGAALRAGLEAEGIDCARLATSAAASTGVALIVVDDASQNTIVIVAGG
EEEEEEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCEEEEEECC
NGEVTPETVARHEAALAATDVLICQLETPPDAVFAALSAGRRLGRTVVLNPAPAVAPLPD
CCCCCHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCC
GWLPLVDYLIPNEVEAAALTGLPVRDPADAEAAARMLQAGGARNVLITLGARGVLALSAD
CHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCEEEEEECC
GAARHYPAPVVQAIDTTAAGDTFIGGFAARLAAGEDVDTAIRFAQRAAALSVTRAGAQPS
CCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCCC
IPTLAELA
CCHHHHCC
>Mature Secondary Structure 
TARTTGAGRVTVVGSLNMDLVVRAPRLPLPGETLAGHAYAQAAGGKGGNQAVAAARLGA
CCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHCCC
QVTMIGCVGADAHGAALRAGLEAEGIDCARLATSAAASTGVALIVVDDASQNTIVIVAGG
EEEEEEEECCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCEEEEEEECCCCCEEEEEECC
NGEVTPETVARHEAALAATDVLICQLETPPDAVFAALSAGRRLGRTVVLNPAPAVAPLPD
CCCCCHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCCC
GWLPLVDYLIPNEVEAAALTGLPVRDPADAEAAARMLQAGGARNVLITLGARGVLALSAD
CHHHHHHHHCCCCCCHHHCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCEEEEEECC
GAARHYPAPVVQAIDTTAAGDTFIGGFAARLAAGEDVDTAIRFAQRAAALSVTRAGAQPS
CCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCCC
IPTLAELA
CCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]