Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351372

Identifier: 115351372

GI number: 115351372

Start: 1447687

End: 1448301

Strand: Direct

Name: 115351372

Synonym: Bamb_1319

Alternate gene names: NA

Gene position: 1447687-1448301 (Clockwise)

Preceding gene: 115351371

Following gene: 115351375

Centisome position: 40.7

GC content: 71.71

Gene sequence:

>615_bases
ATGAGAAAGGAATGGGCAGCGACCGCATTGGCGGCGTCGCTGTTGACGGGTTGCGCCGGCGTCACGACCGGCGTGAGCGC
GCTCGGGCAGCCGAATGCGTTCGCGTCCGGTGCGCACGGCTACGATGTCGTTCGCACGGCCGCTCAGGCCGACGATGCCG
AATACCGGCGGATCGAGACGCTGGTGCGCGACGCGCTCGCGCAGCGCGGCTTCGACGCGCAAGCCGGCAAGGATGCGCGC
TACCGGCTGTCGATCGCGTATGCGACGCAGCCGGCGTCGGTCGCGGCGACGGCCGACCAGTGCGGCGCCGCGAGCAGCGC
ATGCGTGACCGTCGACGGGCCGGCGCCGTTCGCGCTGCCGTTCGCGGGCACGGTGTACCGCCACGTGCTGACGCTGCGTT
TCGTCGACGCGAGCTCGGGTGCGGATGTCTATCGCGTGTCGGCGTCGCTGCGCGATCGCGATCCGGGCACGCAGCAGGCC
GCGCCGACGCTCGTGCGGAGCGCGCTCGCGAAGCTGCCGTTCGAGCAGGGTGACGGCTGGCTCGTGAAGACGAAAAAAGA
CGACGCGGGCGCAATGCCGGGCGTCGTCTCGGTGAAGCCGGCCGCCGCGCGCTGA

Upstream 100 bases:

>100_bases
GAAGTGGGTGTCGGCACCGCGGTGACGGTGTCGCTGCCCGCGATCGACGAGCCGTCCGCCTGACAGGGCCGGGCACGACG
GCAGGCATTTGGGGGAAGTC

Downstream 100 bases:

>100_bases
CGCGCCGGCCGTGAGGTGAGGGCGGGCCCGCCGGAAAGGCGAGGCCGGCCCGGGCCGCGTTCAGGCGGCCGGATGCGCGT
TGCCGCGCGTGCGCAGGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MRKEWAATALAASLLTGCAGVTTGVSALGQPNAFASGAHGYDVVRTAAQADDAEYRRIETLVRDALAQRGFDAQAGKDAR
YRLSIAYATQPASVAATADQCGAASSACVTVDGPAPFALPFAGTVYRHVLTLRFVDASSGADVYRVSASLRDRDPGTQQA
APTLVRSALAKLPFEQGDGWLVKTKKDDAGAMPGVVSVKPAAAR

Sequences:

>Translated_204_residues
MRKEWAATALAASLLTGCAGVTTGVSALGQPNAFASGAHGYDVVRTAAQADDAEYRRIETLVRDALAQRGFDAQAGKDAR
YRLSIAYATQPASVAATADQCGAASSACVTVDGPAPFALPFAGTVYRHVLTLRFVDASSGADVYRVSASLRDRDPGTQQA
APTLVRSALAKLPFEQGDGWLVKTKKDDAGAMPGVVSVKPAAAR
>Mature_204_residues
MRKEWAATALAASLLTGCAGVTTGVSALGQPNAFASGAHGYDVVRTAAQADDAEYRRIETLVRDALAQRGFDAQAGKDAR
YRLSIAYATQPASVAATADQCGAASSACVTVDGPAPFALPFAGTVYRHVLTLRFVDASSGADVYRVSASLRDRDPGTQQA
APTLVRSALAKLPFEQGDGWLVKTKKDDAGAMPGVVSVKPAAAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21102; Mature: 21102

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKEWAATALAASLLTGCAGVTTGVSALGQPNAFASGAHGYDVVRTAAQADDAEYRRIET
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
LVRDALAQRGFDAQAGKDARYRLSIAYATQPASVAATADQCGAASSACVTVDGPAPFALP
HHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCHHHHCHHHCCCCCCCEEEECCCCCEECC
FAGTVYRHVLTLRFVDASSGADVYRVSASLRDRDPGTQQAAPTLVRSALAKLPFEQGDGW
HHHHHHHHHHHHEEEECCCCCCEEEEECHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCE
LVKTKKDDAGAMPGVVSVKPAAAR
EEEECCCCCCCCCCEEECCCCCCC
>Mature Secondary Structure
MRKEWAATALAASLLTGCAGVTTGVSALGQPNAFASGAHGYDVVRTAAQADDAEYRRIET
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHH
LVRDALAQRGFDAQAGKDARYRLSIAYATQPASVAATADQCGAASSACVTVDGPAPFALP
HHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCHHHHCHHHCCCCCCCEEEECCCCCEECC
FAGTVYRHVLTLRFVDASSGADVYRVSASLRDRDPGTQQAAPTLVRSALAKLPFEQGDGW
HHHHHHHHHHHHEEEECCCCCCEEEEECHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCE
LVKTKKDDAGAMPGVVSVKPAAAR
EEEECCCCCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA