Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351368

Identifier: 115351368

GI number: 115351368

Start: 1442453

End: 1442842

Strand: Direct

Name: 115351368

Synonym: Bamb_1315

Alternate gene names: NA

Gene position: 1442453-1442842 (Clockwise)

Preceding gene: 115351367

Following gene: 115351369

Centisome position: 40.56

GC content: 72.56

Gene sequence:

>390_bases
ATGTCCTTCAGACAAGGGACCATTCGAAGTCCGTCCGCGGCGGAACGCATCGCGCCCGCACGCGCGGCGGGGTCGAGCCG
GATCGAGCTCGACCCGCAACAGGATCGCCACGCGCGTGCCGCGCTGGAGGCCTATGCCGATTCGGCGGCGGCCGAGATGC
CGTGGCTGGCCGAATCGCTCGACGAACGATTGCGCGACGCCGCGCATGGCGACGGCGCGGGCCTCACGTATTGCGGCGCG
ACGGTCGAACGCGTGTTCGATCTCGCGCACGCGTGGGCGGCGAGCCAGCCCGACTATGCGGCGCCGGCGTGGGAGCGCGT
GCGCGGCCAGCTGGAGCGGATGCTGCGGCAGCCGATGCTGCGGCAGCCGACGCTGCGGCAGCCGGAGTAG

Upstream 100 bases:

>100_bases
CGGTCGTCCGTCTCGGATGGATGCGCCGGCCACGGTACGTCATACGAGGCGGGCACGGGGGCCATGCCTGACGCTACCGT
CGTACAAACGGGGAGAGGAC

Downstream 100 bases:

>100_bases
CCGTCGCTCGGTCGGCGGCGGCGTGTGCCGACCGACGATTTTGCCGAGCCGATGGCCCGGTTGGCGGGCGCCGACCAGGG
CGCGTAATCGCGCGATCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 129; Mature: 128

Protein sequence:

>129_residues
MSFRQGTIRSPSAAERIAPARAAGSSRIELDPQQDRHARAALEAYADSAAAEMPWLAESLDERLRDAAHGDGAGLTYCGA
TVERVFDLAHAWAASQPDYAAPAWERVRGQLERMLRQPMLRQPTLRQPE

Sequences:

>Translated_129_residues
MSFRQGTIRSPSAAERIAPARAAGSSRIELDPQQDRHARAALEAYADSAAAEMPWLAESLDERLRDAAHGDGAGLTYCGA
TVERVFDLAHAWAASQPDYAAPAWERVRGQLERMLRQPMLRQPTLRQPE
>Mature_128_residues
SFRQGTIRSPSAAERIAPARAAGSSRIELDPQQDRHARAALEAYADSAAAEMPWLAESLDERLRDAAHGDGAGLTYCGAT
VERVFDLAHAWAASQPDYAAPAWERVRGQLERMLRQPMLRQPTLRQPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14240; Mature: 14109

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFRQGTIRSPSAAERIAPARAAGSSRIELDPQQDRHARAALEAYADSAAAEMPWLAESL
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
DERLRDAAHGDGAGLTYCGATVERVFDLAHAWAASQPDYAAPAWERVRGQLERMLRQPML
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
RQPTLRQPE
CCCCCCCCC
>Mature Secondary Structure 
SFRQGTIRSPSAAERIAPARAAGSSRIELDPQQDRHARAALEAYADSAAAEMPWLAESL
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH
DERLRDAAHGDGAGLTYCGATVERVFDLAHAWAASQPDYAAPAWERVRGQLERMLRQPML
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
RQPTLRQPE
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA