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The map label for this gene is nudC [H]

Identifier: 115351345

GI number: 115351345

Start: 1417902

End: 1418438

Strand: Direct

Name: nudC [H]

Synonym: Bamb_1292

Alternate gene names: 115351345

Gene position: 1417902-1418438 (Clockwise)

Preceding gene: 115351344

Following gene: 115351346

Centisome position: 39.87

GC content: 69.09

Gene sequence:

>537_bases
ATGACCACCGCCGACTACCGTTTTTGCCCGCGCTGCGCGAGCCCGCTCACCGAGCGCGCCGATCCCGAACACGAGGGCGG
CCGCGTCCGCCGGGCCTGCCCGGACGATGCGTGCGGCTACGTGCACTGGAACAACCCGCTGCCGGTGGTGGCCGCGATCG
TCGAACTCGACGGCAAGATCCTGCTTGCGCGCAACGCGGCCTGGCCGGAAGGGATGTTCGCGCTGATCACCGGCTTCCTC
GAGAACGGCGAGACGCCCGAGGACGGCATCGCGCGCGAGGTGTTCGAGGAAACCGCGCTGAAGGCCGAGCAGGTCACGCT
CGTCGGCGTCTATGAATTCATCCGCAAGAACGAGCTGATCATCGCGTACCACGTGCGCGCATCGGGCACCGTCGCGCTGT
CGCCGGAACTGCTCGAATACCGGCTCGTCGATCCGCCGCTGCTGCGCCCGTGGCGCGCCGGCACCGGCTACGCGCTGGCC
GACTGGATGCGCGCGCGCGGCCTCGATTTCGAATTCGTCGATCGAGCGGGGCAGTGA

Upstream 100 bases:

>100_bases
TCTGCGGCGCGGGCAAACTCGCTAGAATGAAGCCTTTCCCGCGCCGAGCGGGCGTGAGGCGGCCTGCGGGCCGCCGCCGG
CGTCCGCCAGATCCTCATCG

Downstream 100 bases:

>100_bases
CGGCCCGCGCCGCTTCCGACATTTCATCCGTCGCGCCGCGCACGCTCGCGTCGCGGCACCTCGCCGCTCACCGGCGTGCC
GTCCCGCGCGGCGTCCCACT

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MTTADYRFCPRCASPLTERADPEHEGGRVRRACPDDACGYVHWNNPLPVVAAIVELDGKILLARNAAWPEGMFALITGFL
ENGETPEDGIAREVFEETALKAEQVTLVGVYEFIRKNELIIAYHVRASGTVALSPELLEYRLVDPPLLRPWRAGTGYALA
DWMRARGLDFEFVDRAGQ

Sequences:

>Translated_178_residues
MTTADYRFCPRCASPLTERADPEHEGGRVRRACPDDACGYVHWNNPLPVVAAIVELDGKILLARNAAWPEGMFALITGFL
ENGETPEDGIAREVFEETALKAEQVTLVGVYEFIRKNELIIAYHVRASGTVALSPELLEYRLVDPPLLRPWRAGTGYALA
DWMRARGLDFEFVDRAGQ
>Mature_177_residues
TTADYRFCPRCASPLTERADPEHEGGRVRRACPDDACGYVHWNNPLPVVAAIVELDGKILLARNAAWPEGMFALITGFLE
NGETPEDGIAREVFEETALKAEQVTLVGVYEFIRKNELIIAYHVRASGTVALSPELLEYRLVDPPLLRPWRAGTGYALAD
WMRARGLDFEFVDRAGQ

Specific function: Unknown

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015375
- InterPro:   IPR022925
- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR015376 [H]

Pfam domain/function: PF00293 NUDIX; PF09296 NUDIX-like; PF09297 zf-NADH-PPase [H]

EC number: =3.6.1.22 [H]

Molecular weight: Translated: 19863; Mature: 19732

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTADYRFCPRCASPLTERADPEHEGGRVRRACPDDACGYVHWNNPLPVVAAIVELDGKI
CCCCCCCCCCHHCCHHHHHCCCCCCCCEEECCCCCCCCCEEEECCCHHHHHHHHHCCCEE
LLARNAAWPEGMFALITGFLENGETPEDGIAREVFEETALKAEQVTLVGVYEFIRKNELI
EEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
IAYHVRASGTVALSPELLEYRLVDPPLLRPWRAGTGYALADWMRARGLDFEFVDRAGQ
EEEEECCCCEEEECHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCC
>Mature Secondary Structure 
TTADYRFCPRCASPLTERADPEHEGGRVRRACPDDACGYVHWNNPLPVVAAIVELDGKI
CCCCCCCCCHHCCHHHHHCCCCCCCCEEECCCCCCCCCEEEECCCHHHHHHHHHCCCEE
LLARNAAWPEGMFALITGFLENGETPEDGIAREVFEETALKAEQVTLVGVYEFIRKNELI
EEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
IAYHVRASGTVALSPELLEYRLVDPPLLRPWRAGTGYALADWMRARGLDFEFVDRAGQ
EEEEECCCCEEEECHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA