Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351330

Identifier: 115351330

GI number: 115351330

Start: 1397023

End: 1398567

Strand: Direct

Name: 115351330

Synonym: Bamb_1277

Alternate gene names: NA

Gene position: 1397023-1398567 (Clockwise)

Preceding gene: 115351329

Following gene: 115351332

Centisome position: 39.28

GC content: 67.38

Gene sequence:

>1545_bases
ATGATCGGGCGAGAGGCGGGCAGGCACCGGACACGTCACGGCCGCCGCTTCGCGCGGGCCGCACGCCTGTCGATCGTCGC
GGGGCTGTTGGTCGCGGGCGCCGACGCGGCGTTCGCGCAGACGCCGGCAGCATCGACCTCGACGCCGGCGCAAGAACCGG
CGCCGGCTTCGACTGCGCCATCGGTTTCTACATCGGCAACGACACCCGTGGCGACCACTGCATCGACCTGCACGGCCAAG
CGGCCGACGGTGCTGTTCAACCGCTGGCAGGAAGACTGGTCGGTGCTCGCGAATCCGTGTGTGCCGCGCGCGCCGCTCGA
CGGGCTGAAATACATTCCGCTCGGCAATGATCCGTCATCCTATCTTTCGCTCGGCGTGAACCTGCGCGAGCGGCTGGAGA
CCAACGACGCGCCGCTGTTCGGGATCGGCTCCGCGCAATCGGATACCTACCTGATCCAGCGCGTCGAGGTGCATGCCGAT
GCGCATCTCGGCCAGCACTGGCAGTTCTTCGTGCAATTGCAGGACGCGCGCGCGTTCGGCAAGAACACGGTGTCGCCGGT
CGACCGGAACCCGCTCGATCTCGAGCAGGCGTTCGCGACCTACACGGGTGAGCTCGGCGGCGGCACGGTCAAGGTCCGCG
TCGGCCGGCAGGAGATGGCGTTCGACTTGCAGCGCTTCATCGCCGCGCGCGACGGCCCGAACGTGCGGCAATCGTTCGAT
GCGGTGTGGGCCGATTACGAATACGGGAAGTGGCGCTTCATCGGCTATGCGACGCAGCCGGTGCAGAACCGCAACGCATC
CGATTTCGACGACGTGTCCAATCGCAATCTCACGTTCAGCGGCTTGCGCTTCGAGCGGCAGTCGATCGGGCCGGGCGACC
TGTCCGGCTACTGGTCGCGGTACAACCGCAAGAACGCGCGCTTTCTCGATGCGAGCGGCCCCGAGCATCGCGACGTGTGG
GATCTGCGCTACTCGGGCACGCAGGGCCGTTTCGACTGGGATCTCGAGACGATGCTGCAGAGCGGGACGGTCGGCAACAA
CACGATCGGCGCGTGGGCCGTCGGCTCGATCGCGGGCTACAAGCTCGACATGCCGTGGTCCCCACGTGTTGCGCTCCAGG
TCGATGCGGCATCGGGCGACCGGCATCCGCACGACGGCCGCGTCGGCACCTTCAACCCGCTGTTTCCGAACGGCTATTAC
TTCACGCTGGCCGGCTTCACGGGCTACTCGAACCTGATCCACGTGAAGCCGTCGGTGACGCTGAAGCCGGCGCCGAACCT
GTCGCTGCTCGGCGCACTCGGCTTCCAGTGGCGCGAGACGACCGGCGACGCCGTCTATCAGCAGGCGAACGTCGCGGTGC
CTGGCACCGCCGGCAAGGGCGGCTCATGGACGGGGATGTACGTGCAGCTGCGCGCGGACTGGACGATCGCCGCGAACCTG
ATCGGCGCGGTCGAGGCCGTGCATTTCCAGGTCGGCGACGCGATCCGGCAGGCGGGCGGGCACAACGCGGACTACGTCGG
TGTTGAGCTGAAGTATGGGTGGTAG

Upstream 100 bases:

>100_bases
GTTACATCGGCTTTGCGGCGCTGCTCGCGCCGGTGTGCGCGCTGGCGACGCTTGCGCTGGGTTCGTCACAAGCGGCCGCG
CCGGCCACGCAGGAGCGCGC

Downstream 100 bases:

>100_bases
CGCGCACGGCGCATGAAAAAGGGCGACCCCGCGTGAGCAGGGTCGCCCTTCGTTCGTCCGGGCCGGCGGCATGGCCGGCC
CGTTCGCGGTGATGGCGATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MIGREAGRHRTRHGRRFARAARLSIVAGLLVAGADAAFAQTPAASTSTPAQEPAPASTAPSVSTSATTPVATTASTCTAK
RPTVLFNRWQEDWSVLANPCVPRAPLDGLKYIPLGNDPSSYLSLGVNLRERLETNDAPLFGIGSAQSDTYLIQRVEVHAD
AHLGQHWQFFVQLQDARAFGKNTVSPVDRNPLDLEQAFATYTGELGGGTVKVRVGRQEMAFDLQRFIAARDGPNVRQSFD
AVWADYEYGKWRFIGYATQPVQNRNASDFDDVSNRNLTFSGLRFERQSIGPGDLSGYWSRYNRKNARFLDASGPEHRDVW
DLRYSGTQGRFDWDLETMLQSGTVGNNTIGAWAVGSIAGYKLDMPWSPRVALQVDAASGDRHPHDGRVGTFNPLFPNGYY
FTLAGFTGYSNLIHVKPSVTLKPAPNLSLLGALGFQWRETTGDAVYQQANVAVPGTAGKGGSWTGMYVQLRADWTIAANL
IGAVEAVHFQVGDAIRQAGGHNADYVGVELKYGW

Sequences:

>Translated_514_residues
MIGREAGRHRTRHGRRFARAARLSIVAGLLVAGADAAFAQTPAASTSTPAQEPAPASTAPSVSTSATTPVATTASTCTAK
RPTVLFNRWQEDWSVLANPCVPRAPLDGLKYIPLGNDPSSYLSLGVNLRERLETNDAPLFGIGSAQSDTYLIQRVEVHAD
AHLGQHWQFFVQLQDARAFGKNTVSPVDRNPLDLEQAFATYTGELGGGTVKVRVGRQEMAFDLQRFIAARDGPNVRQSFD
AVWADYEYGKWRFIGYATQPVQNRNASDFDDVSNRNLTFSGLRFERQSIGPGDLSGYWSRYNRKNARFLDASGPEHRDVW
DLRYSGTQGRFDWDLETMLQSGTVGNNTIGAWAVGSIAGYKLDMPWSPRVALQVDAASGDRHPHDGRVGTFNPLFPNGYY
FTLAGFTGYSNLIHVKPSVTLKPAPNLSLLGALGFQWRETTGDAVYQQANVAVPGTAGKGGSWTGMYVQLRADWTIAANL
IGAVEAVHFQVGDAIRQAGGHNADYVGVELKYGW
>Mature_514_residues
MIGREAGRHRTRHGRRFARAARLSIVAGLLVAGADAAFAQTPAASTSTPAQEPAPASTAPSVSTSATTPVATTASTCTAK
RPTVLFNRWQEDWSVLANPCVPRAPLDGLKYIPLGNDPSSYLSLGVNLRERLETNDAPLFGIGSAQSDTYLIQRVEVHAD
AHLGQHWQFFVQLQDARAFGKNTVSPVDRNPLDLEQAFATYTGELGGGTVKVRVGRQEMAFDLQRFIAARDGPNVRQSFD
AVWADYEYGKWRFIGYATQPVQNRNASDFDDVSNRNLTFSGLRFERQSIGPGDLSGYWSRYNRKNARFLDASGPEHRDVW
DLRYSGTQGRFDWDLETMLQSGTVGNNTIGAWAVGSIAGYKLDMPWSPRVALQVDAASGDRHPHDGRVGTFNPLFPNGYY
FTLAGFTGYSNLIHVKPSVTLKPAPNLSLLGALGFQWRETTGDAVYQQANVAVPGTAGKGGSWTGMYVQLRADWTIAANL
IGAVEAVHFQVGDAIRQAGGHNADYVGVELKYGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56078; Mature: 56078

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGREAGRHRTRHGRRFARAARLSIVAGLLVAGADAAFAQTPAASTSTPAQEPAPASTAP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCC
SVSTSATTPVATTASTCTAKRPTVLFNRWQEDWSVLANPCVPRAPLDGLKYIPLGNDPSS
CCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHH
YLSLGVNLRERLETNDAPLFGIGSAQSDTYLIQRVEVHADAHLGQHWQFFVQLQDARAFG
HHEECCCHHHHHCCCCCCEEEECCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECHHHCC
KNTVSPVDRNPLDLEQAFATYTGELGGGTVKVRVGRQEMAFDLQRFIAARDGPNVRQSFD
CCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCHHHHHHH
AVWADYEYGKWRFIGYATQPVQNRNASDFDDVSNRNLTFSGLRFERQSIGPGDLSGYWSR
HHHCCCCCCCEEEEEEECCCCCCCCCCCCHHCCCCCEEEEEEEEECCCCCCCCHHHHHHH
YNRKNARFLDASGPEHRDVWDLRYSGTQGRFDWDLETMLQSGTVGNNTIGAWAVGSIAGY
HCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCEEECCCCCE
KLDMPWSPRVALQVDAASGDRHPHDGRVGTFNPLFPNGYYFTLAGFTGYSNLIHVKPSVT
EECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCEE
LKPAPNLSLLGALGFQWRETTGDAVYQQANVAVPGTAGKGGSWTGMYVQLRADWTIAANL
ECCCCCEEEEECCCCEEECCCCHHHHHHCCEECCCCCCCCCCEEEEEEEEEECCEEEHHH
IGAVEAVHFQVGDAIRQAGGHNADYVGVELKYGW
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MIGREAGRHRTRHGRRFARAARLSIVAGLLVAGADAAFAQTPAASTSTPAQEPAPASTAP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCC
SVSTSATTPVATTASTCTAKRPTVLFNRWQEDWSVLANPCVPRAPLDGLKYIPLGNDPSS
CCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHH
YLSLGVNLRERLETNDAPLFGIGSAQSDTYLIQRVEVHADAHLGQHWQFFVQLQDARAFG
HHEECCCHHHHHCCCCCCEEEECCCCCCEEEEEEEEEECCCCCCCCEEEEEEEECHHHCC
KNTVSPVDRNPLDLEQAFATYTGELGGGTVKVRVGRQEMAFDLQRFIAARDGPNVRQSFD
CCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHHHHCCCCHHHHHHH
AVWADYEYGKWRFIGYATQPVQNRNASDFDDVSNRNLTFSGLRFERQSIGPGDLSGYWSR
HHHCCCCCCCEEEEEEECCCCCCCCCCCCHHCCCCCEEEEEEEEECCCCCCCCHHHHHHH
YNRKNARFLDASGPEHRDVWDLRYSGTQGRFDWDLETMLQSGTVGNNTIGAWAVGSIAGY
HCCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCEEECCCCCE
KLDMPWSPRVALQVDAASGDRHPHDGRVGTFNPLFPNGYYFTLAGFTGYSNLIHVKPSVT
EECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEECCCEE
LKPAPNLSLLGALGFQWRETTGDAVYQQANVAVPGTAGKGGSWTGMYVQLRADWTIAANL
ECCCCCEEEEECCCCEEECCCCHHHHHHCCEECCCCCCCCCCEEEEEEEEEECCEEEHHH
IGAVEAVHFQVGDAIRQAGGHNADYVGVELKYGW
HHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA