| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115351318
Identifier: 115351318
GI number: 115351318
Start: 1387307
End: 1387489
Strand: Direct
Name: 115351318
Synonym: Bamb_1265
Alternate gene names: NA
Gene position: 1387307-1387489 (Clockwise)
Preceding gene: 115351317
Following gene: 115351323
Centisome position: 39.01
GC content: 67.76
Gene sequence:
>183_bases GTGATCAATATCGGCGAAGGCGACGACGATCGCCTGTCGCAGCCGAACGACGTGCTCGGCCTCGCGCGGCACCTGCCCGC GCTGGACCCGGCCCGTTATGTCGACGAGCAGGCGCGGCGCGCGTTCGTCGAATCGCTCGAACGCTGGCCGACGCTCGCGA AGCTGATGGGATTGAAGCGGTGA
Upstream 100 bases:
>100_bases CGCGCACGCGGATGGTGGGCGAGAACGAAGGCACGGTGACGATGCAGACGAGCGCGGGCTACGCGGTCAAGACTCCGGAT GGCGTATGGATCGACGAACA
Downstream 100 bases:
>100_bases GCGCTCGGCGGCCGGCGTGAATGCCGGCCGCCGTGTATGGATGGGGATGGACCGACCGATGCCGGCTTACTGCGCCTTGC GCGCCGGCTGGCGCGTCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 60; Mature: 60
Protein sequence:
>60_residues MINIGEGDDDRLSQPNDVLGLARHLPALDPARYVDEQARRAFVESLERWPTLAKLMGLKR
Sequences:
>Translated_60_residues MINIGEGDDDRLSQPNDVLGLARHLPALDPARYVDEQARRAFVESLERWPTLAKLMGLKR >Mature_60_residues MINIGEGDDDRLSQPNDVLGLARHLPALDPARYVDEQARRAFVESLERWPTLAKLMGLKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6816; Mature: 6816
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINIGEGDDDRLSQPNDVLGLARHLPALDPARYVDEQARRAFVESLERWPTLAKLMGLKR CCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MINIGEGDDDRLSQPNDVLGLARHLPALDPARYVDEQARRAFVESLERWPTLAKLMGLKR CCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA