| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115351270
Identifier: 115351270
GI number: 115351270
Start: 1329817
End: 1330434
Strand: Direct
Name: 115351270
Synonym: Bamb_1217
Alternate gene names: NA
Gene position: 1329817-1330434 (Clockwise)
Preceding gene: 115351269
Following gene: 115351271
Centisome position: 37.39
GC content: 68.77
Gene sequence:
>618_bases ATGAATATGAAAGGCCTTTTGGGCGGGCGCGGCGACGACGCGCCACAGACATCGGGCGACGTCGACGACGCCGCAGCCGA AGCCGACGCCGCGACGCCAGCCGATGTCGCGCCGGTCGCCGCGGCGTCGAAGGTCGGCGCGCGCGCGTGGCCGGTCAACC GGCTGCGCAGGTTCACCGATGCGCTGAAGGCGCCGAACGAGATCGCGGGCGGGGCCGGAGCCGGCGGCTCCGCGCTGCAG ACCGTGCAGGCGATCAACGCGGAAGCGGCGTCCTACGCGACGACGCAGATCGCGGTCGGTCCGAACATGTTGATCACGCA GGCGGGCGGCATGGTTGCGCAGGCGGCGGCCAACTACTTCGAGGCGTCGACGTCGCTGGCGATCGCGGGCAAGAGCGTGC TGATGAAGGATCTCGCGCAGAAGACCATCGACGAGAACGTGTCCGGGATGGCGATGGATGCGATGGGCCTGCTGTTGACG GACCTGTTCGTCGCGACCGCGGCGCTCGTCGCGGGCGCCGCGGAAGCGATCGAAGGGGAGGCTGCGAGCGTCGCGCTCGA CAAGATCGACGAGAGTCTGCAGAAGTATCAGGCGCTGTTGGACAAGAAGGGTGCGTAG
Upstream 100 bases:
>100_bases CATCGGGCGCCGCATCGGGTGGCGCGCCGCACGGCGCGACGAGCGGGCCGCACACGGGTACCACGCATTAGCACGTGCAG ACTCTCGGGATACCTGAACC
Downstream 100 bases:
>100_bases TGCGAGCCGGTGGCGGCGGACTTCCAACCTGCCGATCCTCGGGAGTGAGCGGAGAAACAATAAGTACACCGACAGATCAA GAAATGGCTACCGTGTGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MNMKGLLGGRGDDAPQTSGDVDDAAAEADAATPADVAPVAAASKVGARAWPVNRLRRFTDALKAPNEIAGGAGAGGSALQ TVQAINAEAASYATTQIAVGPNMLITQAGGMVAQAAANYFEASTSLAIAGKSVLMKDLAQKTIDENVSGMAMDAMGLLLT DLFVATAALVAGAAEAIEGEAASVALDKIDESLQKYQALLDKKGA
Sequences:
>Translated_205_residues MNMKGLLGGRGDDAPQTSGDVDDAAAEADAATPADVAPVAAASKVGARAWPVNRLRRFTDALKAPNEIAGGAGAGGSALQ TVQAINAEAASYATTQIAVGPNMLITQAGGMVAQAAANYFEASTSLAIAGKSVLMKDLAQKTIDENVSGMAMDAMGLLLT DLFVATAALVAGAAEAIEGEAASVALDKIDESLQKYQALLDKKGA >Mature_205_residues MNMKGLLGGRGDDAPQTSGDVDDAAAEADAATPADVAPVAAASKVGARAWPVNRLRRFTDALKAPNEIAGGAGAGGSALQ TVQAINAEAASYATTQIAVGPNMLITQAGGMVAQAAANYFEASTSLAIAGKSVLMKDLAQKTIDENVSGMAMDAMGLLLT DLFVATAALVAGAAEAIEGEAASVALDKIDESLQKYQALLDKKGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20508; Mature: 20508
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMKGLLGGRGDDAPQTSGDVDDAAAEADAATPADVAPVAAASKVGARAWPVNRLRRFTD CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH ALKAPNEIAGGAGAGGSALQTVQAINAEAASYATTQIAVGPNMLITQAGGMVAQAAANYF HHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCEEEECCCCHHHHHHHHHH EASTSLAIAGKSVLMKDLAQKTIDENVSGMAMDAMGLLLTDLFVATAALVAGAAEAIEGE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AASVALDKIDESLQKYQALLDKKGA HHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNMKGLLGGRGDDAPQTSGDVDDAAAEADAATPADVAPVAAASKVGARAWPVNRLRRFTD CCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHH ALKAPNEIAGGAGAGGSALQTVQAINAEAASYATTQIAVGPNMLITQAGGMVAQAAANYF HHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCEEEECCCCHHHHHHHHHH EASTSLAIAGKSVLMKDLAQKTIDENVSGMAMDAMGLLLTDLFVATAALVAGAAEAIEGE HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC AASVALDKIDESLQKYQALLDKKGA HHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA