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The map label for this gene is 115351268

Identifier: 115351268

GI number: 115351268

Start: 1328798

End: 1329355

Strand: Direct

Name: 115351268

Synonym: Bamb_1215

Alternate gene names: NA

Gene position: 1328798-1329355 (Clockwise)

Preceding gene: 115351266

Following gene: 115351269

Centisome position: 37.36

GC content: 63.08

Gene sequence:

>558_bases
ATGACAACCTCGAACCCGCACGCTGCCCCGCCGGCCGCGTCACAGGCGCAGCAGCTCGATCGTACGTGGCGTGAAATGCA
GGGGAAATTGCGGCGGCGCGCGCGCCTCTTGTGCAAGGGGGACATTTACCGTGCCGACGAACTGCTTTCGGATACCGCAC
TCAAGGTTCACATTTACCTGCAGCGTTCGCCCGAGCGTGTTCGGAACCTGGCCGGCTTTCTCTTTCTGGCGCTAAACCAC
GCGTTCCTCTCTGGCGCGCGCCAGCGTCAGCGCGAAAACGGCATGCTCGAATACGACTCGAGCTGGGACGACGATCACGT
CGCCGAGCTGGCGGGCCACGCACCGTCGATGGAGCAGCAATTGGTGCACCGACAGCAACTGCTGCGTCTCGACCAGGCGC
TGTCGATGCTCCCGCAGCAGCAGCAGATGCTGTTCACGCTGAAGTTCGAGGAGGACATGCCGTATCCGCATATCGCGGCG
ACGCTCGGCATCAACGAGCCGCTTGCCAGAAAGCGCGTCGAGCTGCTGCGCAAGAAATTGCGCGACGGCCTCGCTTGA

Upstream 100 bases:

>100_bases
TTGACCAAAACGATTATCTCAATAACGGTGTAACGCGGGTAACAGCGCCGCTCTCGGCATCAAATCGATTCTGTGTTTTC
CATAAAAACGGAGGCACGGA

Downstream 100 bases:

>100_bases
GCACGTTCACGAATGCGGGGACGCAGCGTTCCTAACGACATACGCGGTGTCGATGGCCTGCCGGCCCGCCCGTTCCTTCA
ACCGCATGCCGGAGCCGAGA

Product: ECF subfamily RNA polymerase sigma-24 factor

Products: NA

Alternate protein names: RNA Polymerase Sigma Factor; RNA Polymerase Sigma-24 Subunit ECF Subfamily; ECF Subfamily RNA Polymerase Sigma-24 Factor

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MTTSNPHAAPPAASQAQQLDRTWREMQGKLRRRARLLCKGDIYRADELLSDTALKVHIYLQRSPERVRNLAGFLFLALNH
AFLSGARQRQRENGMLEYDSSWDDDHVAELAGHAPSMEQQLVHRQQLLRLDQALSMLPQQQQMLFTLKFEEDMPYPHIAA
TLGINEPLARKRVELLRKKLRDGLA

Sequences:

>Translated_185_residues
MTTSNPHAAPPAASQAQQLDRTWREMQGKLRRRARLLCKGDIYRADELLSDTALKVHIYLQRSPERVRNLAGFLFLALNH
AFLSGARQRQRENGMLEYDSSWDDDHVAELAGHAPSMEQQLVHRQQLLRLDQALSMLPQQQQMLFTLKFEEDMPYPHIAA
TLGINEPLARKRVELLRKKLRDGLA
>Mature_184_residues
TTSNPHAAPPAASQAQQLDRTWREMQGKLRRRARLLCKGDIYRADELLSDTALKVHIYLQRSPERVRNLAGFLFLALNHA
FLSGARQRQRENGMLEYDSSWDDDHVAELAGHAPSMEQQLVHRQQLLRLDQALSMLPQQQQMLFTLKFEEDMPYPHIAAT
LGINEPLARKRVELLRKKLRDGLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21305; Mature: 21174

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSNPHAAPPAASQAQQLDRTWREMQGKLRRRARLLCKGDIYRADELLSDTALKVHIYL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEE
QRSPERVRNLAGFLFLALNHAFLSGARQRQRENGMLEYDSSWDDDHVAELAGHAPSMEQQ
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHCCCCCHHHH
LVHRQQLLRLDQALSMLPQQQQMLFTLKFEEDMPYPHIAATLGINEPLARKRVELLRKKL
HHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHH
RDGLA
HHCCC
>Mature Secondary Structure 
TTSNPHAAPPAASQAQQLDRTWREMQGKLRRRARLLCKGDIYRADELLSDTALKVHIYL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEEE
QRSPERVRNLAGFLFLALNHAFLSGARQRQRENGMLEYDSSWDDDHVAELAGHAPSMEQQ
ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHCCCCCHHHH
LVHRQQLLRLDQALSMLPQQQQMLFTLKFEEDMPYPHIAATLGINEPLARKRVELLRKKL
HHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHH
RDGLA
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA