| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115351265
Identifier: 115351265
GI number: 115351265
Start: 1326750
End: 1327118
Strand: Direct
Name: 115351265
Synonym: Bamb_1212
Alternate gene names: NA
Gene position: 1326750-1327118 (Clockwise)
Preceding gene: 115351264
Following gene: 115351266
Centisome position: 37.3
GC content: 66.94
Gene sequence:
>369_bases ATGGGAAACGAAAACGATCCGATCATTGGCGACCCGACCGACGCCTGCGACTGCAAGACCTGCGCGGTCAATGCCGCGAT CACCGATGCGGTCACGCAGACCAACGTCAAGGTCGTGGGCGAAGCGCCCGCGATGGCGACGGGCTCGCTGTACCAGGCCC AGAGCCATTCGCTCAGCGTGCTGTTCGAAAACGCCGTGCAGCAGCAGTCGCAGGCCGCGGTGCAACTGCCGACGTCGACG AACGTGGGGACGATGCAGCTCTACACGCTCGGGCCGGCGAGCGCGGGCGCCGCCGCAACGGAAATCGGCTCGAGCGGCGT GCTTTCCGTGCTGGCTGACGTGCTCGCGATCGGCAAGGCGCTCGCCTGA
Upstream 100 bases:
>100_bases CACAGCGGTGCCGTGTGGTGTTCCGGAGCAACTGACAGAACTGACAGAACGGGCAGAGCCGATTCGATGCGGCGCCCGAT CGCAAACCAGGAGAAACTCG
Downstream 100 bases:
>100_bases CGCGCAACCCGGCGTTGACGCCTGGCGGCAGCCGCGGTGGCCGCCGCCAGGCACCCGACGTCGTGCCGACATCCGCGAAG GCCGCCGCCCGCGCCGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: RebB Like Protein; R Body Protein RebB-Like Protein
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MGNENDPIIGDPTDACDCKTCAVNAAITDAVTQTNVKVVGEAPAMATGSLYQAQSHSLSVLFENAVQQQSQAAVQLPTST NVGTMQLYTLGPASAGAAATEIGSSGVLSVLADVLAIGKALA
Sequences:
>Translated_122_residues MGNENDPIIGDPTDACDCKTCAVNAAITDAVTQTNVKVVGEAPAMATGSLYQAQSHSLSVLFENAVQQQSQAAVQLPTST NVGTMQLYTLGPASAGAAATEIGSSGVLSVLADVLAIGKALA >Mature_121_residues GNENDPIIGDPTDACDCKTCAVNAAITDAVTQTNVKVVGEAPAMATGSLYQAQSHSLSVLFENAVQQQSQAAVQLPTSTN VGTMQLYTLGPASAGAAATEIGSSGVLSVLADVLAIGKALA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12180; Mature: 12049
Theoretical pI: Translated: 3.86; Mature: 3.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNENDPIIGDPTDACDCKTCAVNAAITDAVTQTNVKVVGEAPAMATGSLYQAQSHSLSV CCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHCCCEEEEECCCCCCCCCHHHCCCCCHHH LFENAVQQQSQAAVQLPTSTNVGTMQLYTLGPASAGAAATEIGSSGVLSVLADVLAIGKA HHHHHHHHHHCCEEECCCCCCCCEEEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHH LA CC >Mature Secondary Structure GNENDPIIGDPTDACDCKTCAVNAAITDAVTQTNVKVVGEAPAMATGSLYQAQSHSLSV CCCCCCCCCCCCCCCCCCCEECCHHHHHHHHCCCEEEEECCCCCCCCCHHHCCCCCHHH LFENAVQQQSQAAVQLPTSTNVGTMQLYTLGPASAGAAATEIGSSGVLSVLADVLAIGKA HHHHHHHHHHCCEEECCCCCCCCEEEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHH LA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA