| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
Click here to switch to the map view.
The map label for this gene is 115351241
Identifier: 115351241
GI number: 115351241
Start: 1301316
End: 1301609
Strand: Direct
Name: 115351241
Synonym: Bamb_1188
Alternate gene names: NA
Gene position: 1301316-1301609 (Clockwise)
Preceding gene: 115351240
Following gene: 115351242
Centisome position: 36.59
GC content: 56.46
Gene sequence:
>294_bases ATGCGGACGTCGATCATGGTGCCCGGCGAAGTGGTGAAGTTGAACGCGGGCGGGTATCACCCGGAAATCGAGTTCGTGAC GAAGGCCGGGGAACACGTCTCGTATCCGCAGGGCGGGATCGTGTCGAAAATGGCTGTCGGCGATCGACCGCAGGTGCGTT ATCTCGCCGAGAATCCGATTCCGACAGCGAGAATCGATCGATTCGATGCGATCTGGGGGAATGTGGTCTTTTTCGCTGTC TTCGGATTGGGCTTCATCGTTTGTGGGTTGATCAACCTTCCGTCACGACAATAA
Upstream 100 bases:
>100_bases ACGAGCGAGCGCATTTATGTACAAGGCCGTAGCCTTTGTCGTGATCGGAGTCGGCTTTTTGATCGCAGCGGCGATAAACG TCCAACTGACGCGGGAATTC
Downstream 100 bases:
>100_bases CCAGATCACTGGGGCGCGGGCATGTCATTTTTGAGCCTGAGCAAGTGGACCTATAACACCGGGGCAGGTGGTGGCCTGAG TGTTGAGATCGTTATGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MRTSIMVPGEVVKLNAGGYHPEIEFVTKAGEHVSYPQGGIVSKMAVGDRPQVRYLAENPIPTARIDRFDAIWGNVVFFAV FGLGFIVCGLINLPSRQ
Sequences:
>Translated_97_residues MRTSIMVPGEVVKLNAGGYHPEIEFVTKAGEHVSYPQGGIVSKMAVGDRPQVRYLAENPIPTARIDRFDAIWGNVVFFAV FGLGFIVCGLINLPSRQ >Mature_97_residues MRTSIMVPGEVVKLNAGGYHPEIEFVTKAGEHVSYPQGGIVSKMAVGDRPQVRYLAENPIPTARIDRFDAIWGNVVFFAV FGLGFIVCGLINLPSRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10618; Mature: 10618
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTSIMVPGEVVKLNAGGYHPEIEFVTKAGEHVSYPQGGIVSKMAVGDRPQVRYLAENPI CCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEEECCCC PTARIDRFDAIWGNVVFFAVFGLGFIVCGLINLPSRQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MRTSIMVPGEVVKLNAGGYHPEIEFVTKAGEHVSYPQGGIVSKMAVGDRPQVRYLAENPI CCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCEEEEECCCC PTARIDRFDAIWGNVVFFAVFGLGFIVCGLINLPSRQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA