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The map label for this gene is ynfA [C]

Identifier: 115351213

GI number: 115351213

Start: 1269162

End: 1269494

Strand: Direct

Name: ynfA [C]

Synonym: Bamb_1160

Alternate gene names: 115351213

Gene position: 1269162-1269494 (Clockwise)

Preceding gene: 115351211

Following gene: 115351217

Centisome position: 35.69

GC content: 71.77

Gene sequence:

>333_bases
ATGACCGAACTGATGAAGATCGCGGCGCTGTTCGCCGTCACTGCGCTGGCCGAAATCGTCGGCTGCTACCTGCCGTGGCT
CGTGCTGAAGGGCGGGCGGCCCGTGTGGCTGCTGGTGCCGGCCGCGCTGTCGCTCGCGCTGTTCGCTTGGCTGCTGACGC
TGCACCCGAGCGCCGCGGGGCGCACGTACGCGGCGTACGGCGGCGTGTATATCGCGGTGGCGCTGATCTGGCTGCGGGTA
GTCGACGGCGTCGCGCTGACCCGCTGGGATGCGGCGGGCGCGGTGCTCGCGCTCGGCGGGATGGCTGTCATCGCGCTGCA
GCCGCGCGCGTAA

Upstream 100 bases:

>100_bases
GTGGGACGGGGGTTCCGGCGCGCTCGGCTCCGGTATGATCGGCGGCGCGCGGCGGGGTCGCGCGGCCCGCCGGGCGACAG
GAGAATTCACGAGGAACCGG

Downstream 100 bases:

>100_bases
GCGCGGCTGCAGGCGGGACTTTCGGGACGCGCGGGACGCCGCGTCAGGCGGCTTCGGCGGTGTCCACGTCGGCGGACTGG
CGCCACACGCACGTACCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MTELMKIAALFAVTALAEIVGCYLPWLVLKGGRPVWLLVPAALSLALFAWLLTLHPSAAGRTYAAYGGVYIAVALIWLRV
VDGVALTRWDAAGAVLALGGMAVIALQPRA

Sequences:

>Translated_110_residues
MTELMKIAALFAVTALAEIVGCYLPWLVLKGGRPVWLLVPAALSLALFAWLLTLHPSAAGRTYAAYGGVYIAVALIWLRV
VDGVALTRWDAAGAVLALGGMAVIALQPRA
>Mature_109_residues
TELMKIAALFAVTALAEIVGCYLPWLVLKGGRPVWLLVPAALSLALFAWLLTLHPSAAGRTYAAYGGVYIAVALIWLRVV
DGVALTRWDAAGAVLALGGMAVIALQPRA

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family

Homologues:

Organism=Escherichia coli, GI1787865, Length=101, Percent_Identity=63.3663366336634, Blast_Score=129, Evalue=6e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1160_BURCM (Q0BGK5)

Other databases:

- EMBL:   CP000440
- RefSeq:   YP_773052.1
- STRING:   Q0BGK5
- GeneID:   4308774
- GenomeReviews:   CP000440_GR
- KEGG:   bam:Bamb_1160
- NMPDR:   fig|339670.3.peg.1761
- eggNOG:   COG1742
- HOGENOM:   HBG313568
- OMA:   TRWDVAG
- ProtClustDB:   PRK02237
- BioCyc:   BAMB339670:BAMB_1160-MONOMER
- HAMAP:   MF_00010
- InterPro:   IPR003844

Pfam domain/function: PF02694 UPF0060

EC number: NA

Molecular weight: Translated: 11573; Mature: 11442

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x13c7b564)-; HASH(0x14e59b58)-; HASH(0x1543e61c)-; HASH(0x14e808fc)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTELMKIAALFAVTALAEIVGCYLPWLVLKGGRPVWLLVPAALSLALFAWLLTLHPSAAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCC
RTYAAYGGVYIAVALIWLRVVDGVALTRWDAAGAVLALGGMAVIALQPRA
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCEEEEEECCCH
>Mature Secondary Structure 
TELMKIAALFAVTALAEIVGCYLPWLVLKGGRPVWLLVPAALSLALFAWLLTLHPSAAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCC
RTYAAYGGVYIAVALIWLRVVDGVALTRWDAAGAVLALGGMAVIALQPRA
CCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCEEEEEECCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA