Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351193

Identifier: 115351193

GI number: 115351193

Start: 1251892

End: 1252194

Strand: Direct

Name: 115351193

Synonym: Bamb_1140

Alternate gene names: NA

Gene position: 1251892-1252194 (Clockwise)

Preceding gene: 115351192

Following gene: 115351196

Centisome position: 35.2

GC content: 66.67

Gene sequence:

>303_bases
ATGAAATGTCCGGTCTGCAAGACGCCCGACCTGCTGATGGCCGAGCGCCAGTCGATCGAGATCGACTACTGTCCGACGTG
CCGTGGCGTGTGGCTCGATCGTGGCGAACTCGACAAGCTGATCGCACGCGAAACCGGCGAGGTGCCGGCACGCCGCGACG
AGCCGGTGGTGCGGCACGATGCCCACGCGCCGCGCGGGCGTGACGATGGCTGGGGGCGCGACGGTCGCCCGCACGACGAC
CGTTACCGGCACGACGGCCAGCGTCGCAAGAAGTCGATGTTCGACCTGTTCGATTTCGATTGA

Upstream 100 bases:

>100_bases
CGCGAAGGCCAAGCGCGCGGCACGCGGCGAAGGTCACTGAGCAAGCGGGCGGGCGAGGGCCCGCCCTCGATTCGGAATTC
TCAACGAAAGGAGAAACGCG

Downstream 100 bases:

>100_bases
ACGCGACGGCGCGCGCGTAGCACGCCGCACGCCGCACGTTGCAAAAAGCCCCGCCAGGTGTGATGCCTGGCGGGGCTTTG
TCATGCGCGTGACGCGATGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MKCPVCKTPDLLMAERQSIEIDYCPTCRGVWLDRGELDKLIARETGEVPARRDEPVVRHDAHAPRGRDDGWGRDGRPHDD
RYRHDGQRRKKSMFDLFDFD

Sequences:

>Translated_100_residues
MKCPVCKTPDLLMAERQSIEIDYCPTCRGVWLDRGELDKLIARETGEVPARRDEPVVRHDAHAPRGRDDGWGRDGRPHDD
RYRHDGQRRKKSMFDLFDFD
>Mature_100_residues
MKCPVCKTPDLLMAERQSIEIDYCPTCRGVWLDRGELDKLIARETGEVPARRDEPVVRHDAHAPRGRDDGWGRDGRPHDD
RYRHDGQRRKKSMFDLFDFD

Specific function: Unknown

COG id: COG3809

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11737; Mature: 11737

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCPVCKTPDLLMAERQSIEIDYCPTCRGVWLDRGELDKLIARETGEVPARRDEPVVRHD
CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
AHAPRGRDDGWGRDGRPHDDRYRHDGQRRKKSMFDLFDFD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKCPVCKTPDLLMAERQSIEIDYCPTCRGVWLDRGELDKLIARETGEVPARRDEPVVRHD
CCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
AHAPRGRDDGWGRDGRPHDDRYRHDGQRRKKSMFDLFDFD
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA