Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351106

Identifier: 115351106

GI number: 115351106

Start: 1144207

End: 1145250

Strand: Direct

Name: 115351106

Synonym: Bamb_1052

Alternate gene names: NA

Gene position: 1144207-1145250 (Clockwise)

Preceding gene: 115351105

Following gene: 115351107

Centisome position: 32.17

GC content: 70.88

Gene sequence:

>1044_bases
ATGACCCGGTGGATCAAATGGCTCGGCTGGCCGATCGGCATCGCGATCCTGCTCGCGCTGGGGCTGCACGAAGGCATCGG
CGACGTGTCGCGGATGCTCGAGCGCGCCGGCTTCACGCTGCTGTGGCTCGTGCCGTTCCACGCGCTGCCGTTGCTGCTCG
ACGCGTATGCGTGGCATCAGCTGCTCGACCGGCGCGCGTCGCTGCCGTTTTTGTGGTGGATCGCGACCGTGCGCGAAGCC
GTGAACCGGCTGCTGCCCGTGGTCGGGATCGGCGGCGAGCTGGTCGGGATCCGGATCGCGCGCTGGCAGGTGCCCGACGC
GAGCCGCGTGACCGCGTCGGTGATCGTCGAGGTGCTGGTGACGATCGTCGTCCAGTATGCGTTCGCGGCGCTCGGCCTCG
TGCTGCTGCTCGCGACCACGCACGACATGGGCGGCGGCACGATCGGCCTGGCGCTGCTGCTGACGCTGCCGCTTCCGGTG
CTCGGCGTCGTGCTGATGCGGCGCGGCGGCGTCTTCCACGCGATCGAGCGGTTTGCGGGGCGTCTGCTCGGCGATTCGCA
CCGGTTGCTGCAGGGCGTCGACGGCCGCCGGCTCGATGCCGACATCGACGCGCTGATGTCGCGCACGGCGCTGCTGTTCA
GTGCGTTCTTCTGGCAGCTGGCCGGCTACGTGCTCGGTGCGCTCGAACTCTACTGGGCGCTCGCGCTGCTCGGGCATCCG
GTCTCGATCGGCGGCGCGATCGCGATCGAGGCGATGACGCAGGCCGTGCGGCATGCGGCATTCATGGTGCCGGGCGGCCT
CGGCGTGCAGGAGGCGACCGTCGTGCTGCTCGCGCAGATGTTCGGCGTCGATCGCGAGACGGCGCTGTCGCTCGCGCTGG
TCAAGCGCGGCCGCGAGGTGCTGTTCGGCTGCGTGGCGCTCGGTTCGTGGCAGCTTGCCGAACTCGTGCGCACGCGGCGC
CGCATCCGTGGGCTGCCGGCCGGGTCGGATGATGCACCGCCCGCGCGCCGCGAGTCCGACGCGCACACCGAAACGACGCA
TTGA

Upstream 100 bases:

>100_bases
AGGCGGCCGGTGTCGCGACCGGCGGGTTTGCGGACGTGTTCGGCCAGCTTGCCGGGCGCAGCGGCACGCGTGCGTCGCGC
GAAGCGGGGGCACACTCGTC

Downstream 100 bases:

>100_bases
ACACGGGACGGGCCGCGCCCGTGTCGCGCTTTTGGCGTTGCGCGGGTATCCTTGGCGCGTGTTTTCTCGACGCGCAATTC
CTCAGATGATTTTTCGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 347; Mature: 346

Protein sequence:

>347_residues
MTRWIKWLGWPIGIAILLALGLHEGIGDVSRMLERAGFTLLWLVPFHALPLLLDAYAWHQLLDRRASLPFLWWIATVREA
VNRLLPVVGIGGELVGIRIARWQVPDASRVTASVIVEVLVTIVVQYAFAALGLVLLLATTHDMGGGTIGLALLLTLPLPV
LGVVLMRRGGVFHAIERFAGRLLGDSHRLLQGVDGRRLDADIDALMSRTALLFSAFFWQLAGYVLGALELYWALALLGHP
VSIGGAIAIEAMTQAVRHAAFMVPGGLGVQEATVVLLAQMFGVDRETALSLALVKRGREVLFGCVALGSWQLAELVRTRR
RIRGLPAGSDDAPPARRESDAHTETTH

Sequences:

>Translated_347_residues
MTRWIKWLGWPIGIAILLALGLHEGIGDVSRMLERAGFTLLWLVPFHALPLLLDAYAWHQLLDRRASLPFLWWIATVREA
VNRLLPVVGIGGELVGIRIARWQVPDASRVTASVIVEVLVTIVVQYAFAALGLVLLLATTHDMGGGTIGLALLLTLPLPV
LGVVLMRRGGVFHAIERFAGRLLGDSHRLLQGVDGRRLDADIDALMSRTALLFSAFFWQLAGYVLGALELYWALALLGHP
VSIGGAIAIEAMTQAVRHAAFMVPGGLGVQEATVVLLAQMFGVDRETALSLALVKRGREVLFGCVALGSWQLAELVRTRR
RIRGLPAGSDDAPPARRESDAHTETTH
>Mature_346_residues
TRWIKWLGWPIGIAILLALGLHEGIGDVSRMLERAGFTLLWLVPFHALPLLLDAYAWHQLLDRRASLPFLWWIATVREAV
NRLLPVVGIGGELVGIRIARWQVPDASRVTASVIVEVLVTIVVQYAFAALGLVLLLATTHDMGGGTIGLALLLTLPLPVL
GVVLMRRGGVFHAIERFAGRLLGDSHRLLQGVDGRRLDADIDALMSRTALLFSAFFWQLAGYVLGALELYWALALLGHPV
SIGGAIAIEAMTQAVRHAAFMVPGGLGVQEATVVLLAQMFGVDRETALSLALVKRGREVLFGCVALGSWQLAELVRTRRR
IRGLPAGSDDAPPARRESDAHTETTH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37716; Mature: 37585

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRWIKWLGWPIGIAILLALGLHEGIGDVSRMLERAGFTLLWLVPFHALPLLLDAYAWHQ
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHH
LLDRRASLPFLWWIATVREAVNRLLPVVGIGGELVGIRIARWQVPDASRVTASVIVEVLV
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHH
TIVVQYAFAALGLVLLLATTHDMGGGTIGLALLLTLPLPVLGVVLMRRGGVFHAIERFAG
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
RLLGDSHRLLQGVDGRRLDADIDALMSRTALLFSAFFWQLAGYVLGALELYWALALLGHP
HHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VSIGGAIAIEAMTQAVRHAAFMVPGGLGVQEATVVLLAQMFGVDRETALSLALVKRGREV
CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHH
LFGCVALGSWQLAELVRTRRRIRGLPAGSDDAPPARRESDAHTETTH
HHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TRWIKWLGWPIGIAILLALGLHEGIGDVSRMLERAGFTLLWLVPFHALPLLLDAYAWHQ
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHH
LLDRRASLPFLWWIATVREAVNRLLPVVGIGGELVGIRIARWQVPDASRVTASVIVEVLV
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHH
TIVVQYAFAALGLVLLLATTHDMGGGTIGLALLLTLPLPVLGVVLMRRGGVFHAIERFAG
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
RLLGDSHRLLQGVDGRRLDADIDALMSRTALLFSAFFWQLAGYVLGALELYWALALLGHP
HHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
VSIGGAIAIEAMTQAVRHAAFMVPGGLGVQEATVVLLAQMFGVDRETALSLALVKRGREV
CCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHH
LFGCVALGSWQLAELVRTRRRIRGLPAGSDDAPPARRESDAHTETTH
HHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA