Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115351103

Identifier: 115351103

GI number: 115351103

Start: 1140528

End: 1141703

Strand: Direct

Name: 115351103

Synonym: Bamb_1049

Alternate gene names: NA

Gene position: 1140528-1141703 (Clockwise)

Preceding gene: 115351101

Following gene: 115351104

Centisome position: 32.07

GC content: 71.51

Gene sequence:

>1176_bases
ATGACGCCGATCGTCACGCTGCTCGACTGGCTCCTGCTCGCATTCACGCTGGCCGCGTCCGGCTACGCGCTCGCCGCGGC
CTTCGCGCCGCGCCCGCGCACGCCGCGCACGGCGGCGCGCGACGGCTTCGCGCCCGTCAGCGTGCTCAAGCCGCTGTGCG
GCGCGGAGCCGCACCTGTACGAGAATCTCGCGACGTTCTGCGAGCAGCGCCATCCGCGCCATGAAGTGCTGTTTGGCGTC
GCGTCGGCGGCCGATCCGGCCGTCGCCGTGGTCGAGCGCTTGCGTGCCGACTATCCGGAGTGCGACATCACGCTCGTGAT
CGACGCGCGCGTGCACGGCAAGAATCTGAAGGTCAGCAACCTGATCAATCTGGCCGAACGCGCGAAGTATGGCCGCATCG
TGATCGCGGACAGCGACATCGCGGTGAAGCCCGACTATCTGGAACGCGTGACGGCGCCGCTCGCCGACGCGTCGGTCGGC
GTCGTCACGTGTCTGTATCATGCGCGCAGCGTCGGCGGGTTCTGGACGCGGATCGGCGCGCAGTTCGTCGATGCGTGGTT
CGCGCCGTCGGTGCGGATCGCGCACCTCGGCCGCTCGAGCCACTTCGGCTTCGGCGCGACACTTGCGCTCACGCGCGACA
CGCTCGACCGGATCGGCGGCTTGCTCGCGCTGAAGGACGAGCTGGCCGACGATTTCTGGCTCGCCGAACTGCCGCGCCGC
CTCGGGCGACGCACCGCGCTGTCCGAGGTCGAGGTCGCGACCGACGTGATCGAGCCGTCGTTCGGGCCGCTCTGGCACCG
CGAGACGCGCTGGCTGCGCACGATCCGTTCGCTGAACCCGGCCGGCTTCACGTTCCTGTTCATCACGTTTACCGCGCCGT
GGCTCGCGATCGGCGCGGCGCTCGCGCTGCGTCTCGACGGCACCTTCGCCGGCACGCTGGCGGGTGGCGCGGCCATCGTG
GGCACGTTCGGGCGGCTGGTGCTGCACGCGCGCGGCGCGGACGGCTGGCGCGCGTTCTGGCGCGATCTGCCGCTCGTCGC
GGTGCGCGACACGCTGCTCACGCTCGAATGGCTCGCGGCCGCGTTCGGCACGCACGTCGTGTGGCGCGGCGCGCGGATGA
CGGTCGTTGGCGGCGAGCGTGCGACGGCGGCGGTGGAAGGCGGGGACGGCCGTTAA

Upstream 100 bases:

>100_bases
GTCGGGTCGTGCCCGCGTTCGTTGCTGTCGGAATACCCAATCGCGTTCAACCAGGTTCAATCGATCGGCACGGCGCCCGC
GTCGCCGGGGAGGCGCGCGC

Downstream 100 bases:

>100_bases
CGCACGTTAACGCACGTTCCCCGAGGGAGCGGCCATGCGCGCGTTCCCCGATCGAATTCGGCCGGACGGCCGAGACGCGC
CGCGCGGCCACGCCGCGCGA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Glycosyltransferase; Glycosyl Transferase Family Protein; Glucosyltransferase; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Glycosyl Transferase Group 2 Family; Glycosyl Transferase; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Acyl-CoA Dehydrogenase-Like; Acyl-CoA Dehydrogenase-Like Protein; UDP-GlucoseCeramide Glycosyltransferase; Glycosyltransferase Family; Glycosyl Transferase Protein; Glycosyl Tranferase Homolog; Syl Transferase Group 2 Family Protein; Putatiave Glycosyltransferase; Family 2 Glycosyl Transferase

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MTPIVTLLDWLLLAFTLAASGYALAAAFAPRPRTPRTAARDGFAPVSVLKPLCGAEPHLYENLATFCEQRHPRHEVLFGV
ASAADPAVAVVERLRADYPECDITLVIDARVHGKNLKVSNLINLAERAKYGRIVIADSDIAVKPDYLERVTAPLADASVG
VVTCLYHARSVGGFWTRIGAQFVDAWFAPSVRIAHLGRSSHFGFGATLALTRDTLDRIGGLLALKDELADDFWLAELPRR
LGRRTALSEVEVATDVIEPSFGPLWHRETRWLRTIRSLNPAGFTFLFITFTAPWLAIGAALALRLDGTFAGTLAGGAAIV
GTFGRLVLHARGADGWRAFWRDLPLVAVRDTLLTLEWLAAAFGTHVVWRGARMTVVGGERATAAVEGGDGR

Sequences:

>Translated_391_residues
MTPIVTLLDWLLLAFTLAASGYALAAAFAPRPRTPRTAARDGFAPVSVLKPLCGAEPHLYENLATFCEQRHPRHEVLFGV
ASAADPAVAVVERLRADYPECDITLVIDARVHGKNLKVSNLINLAERAKYGRIVIADSDIAVKPDYLERVTAPLADASVG
VVTCLYHARSVGGFWTRIGAQFVDAWFAPSVRIAHLGRSSHFGFGATLALTRDTLDRIGGLLALKDELADDFWLAELPRR
LGRRTALSEVEVATDVIEPSFGPLWHRETRWLRTIRSLNPAGFTFLFITFTAPWLAIGAALALRLDGTFAGTLAGGAAIV
GTFGRLVLHARGADGWRAFWRDLPLVAVRDTLLTLEWLAAAFGTHVVWRGARMTVVGGERATAAVEGGDGR
>Mature_390_residues
TPIVTLLDWLLLAFTLAASGYALAAAFAPRPRTPRTAARDGFAPVSVLKPLCGAEPHLYENLATFCEQRHPRHEVLFGVA
SAADPAVAVVERLRADYPECDITLVIDARVHGKNLKVSNLINLAERAKYGRIVIADSDIAVKPDYLERVTAPLADASVGV
VTCLYHARSVGGFWTRIGAQFVDAWFAPSVRIAHLGRSSHFGFGATLALTRDTLDRIGGLLALKDELADDFWLAELPRRL
GRRTALSEVEVATDVIEPSFGPLWHRETRWLRTIRSLNPAGFTFLFITFTAPWLAIGAALALRLDGTFAGTLAGGAAIVG
TFGRLVLHARGADGWRAFWRDLPLVAVRDTLLTLEWLAAAFGTHVVWRGARMTVVGGERATAAVEGGDGR

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4507811, Length=240, Percent_Identity=32.9166666666667, Blast_Score=111, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI25147526, Length=268, Percent_Identity=27.6119402985075, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI25149577, Length=249, Percent_Identity=28.1124497991968, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI32564728, Length=249, Percent_Identity=28.1124497991968, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI25149574, Length=249, Percent_Identity=28.1124497991968, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI25149580, Length=249, Percent_Identity=28.1124497991968, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI32566973, Length=269, Percent_Identity=26.0223048327138, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24657569, Length=240, Percent_Identity=30.4166666666667, Blast_Score=100, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42408; Mature: 42277

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPIVTLLDWLLLAFTLAASGYALAAAFAPRPRTPRTAARDGFAPVSVLKPLCGAEPHLY
CCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHCCCCCHHHHHHHHHCCCCHHH
ENLATFCEQRHPRHEVLFGVASAADPAVAVVERLRADYPECDITLVIDARVHGKNLKVSN
HHHHHHHHHCCCHHHHHEEHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHH
LINLAERAKYGRIVIADSDIAVKPDYLERVTAPLADASVGVVTCLYHARSVGGFWTRIGA
HHHHHHHCCCCEEEEECCCCEECCHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHH
QFVDAWFAPSVRIAHLGRSSHFGFGATLALTRDTLDRIGGLLALKDELADDFWLAELPRR
HHHHHHCCCCEEEEECCCCCCCCCCEEEEEEHHHHHHHCCHHHHHHHHCCHHHHHHHHHH
LGRRTALSEVEVATDVIEPSFGPLWHRETRWLRTIRSLNPAGFTFLFITFTAPWLAIGAA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHH
LALRLDGTFAGTLAGGAAIVGTFGRLVLHARGADGWRAFWRDLPLVAVRDTLLTLEWLAA
HHEEECCCEEHHHCCCHHHHHHHHHHEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
AFGTHVVWRGARMTVVGGERATAAVEGGDGR
HHHHHHEECCCEEEEECCCCCEEEECCCCCC
>Mature Secondary Structure 
TPIVTLLDWLLLAFTLAASGYALAAAFAPRPRTPRTAARDGFAPVSVLKPLCGAEPHLY
CHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHCCCCCHHHHHHHHHCCCCHHH
ENLATFCEQRHPRHEVLFGVASAADPAVAVVERLRADYPECDITLVIDARVHGKNLKVSN
HHHHHHHHHCCCHHHHHEEHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCHHH
LINLAERAKYGRIVIADSDIAVKPDYLERVTAPLADASVGVVTCLYHARSVGGFWTRIGA
HHHHHHHCCCCEEEEECCCCEECCHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHH
QFVDAWFAPSVRIAHLGRSSHFGFGATLALTRDTLDRIGGLLALKDELADDFWLAELPRR
HHHHHHCCCCEEEEECCCCCCCCCCEEEEEEHHHHHHHCCHHHHHHHHCCHHHHHHHHHH
LGRRTALSEVEVATDVIEPSFGPLWHRETRWLRTIRSLNPAGFTFLFITFTAPWLAIGAA
HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHH
LALRLDGTFAGTLAGGAAIVGTFGRLVLHARGADGWRAFWRDLPLVAVRDTLLTLEWLAA
HHEEECCCEEHHHCCCHHHHHHHHHHEEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHH
AFGTHVVWRGARMTVVGGERATAAVEGGDGR
HHHHHHEECCCEEEEECCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA