| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is pheA [H]
Identifier: 115350973
GI number: 115350973
Start: 1011204
End: 1012286
Strand: Direct
Name: pheA [H]
Synonym: Bamb_0919
Alternate gene names: 115350973
Gene position: 1011204-1012286 (Clockwise)
Preceding gene: 115350972
Following gene: 115350974
Centisome position: 28.43
GC content: 68.33
Gene sequence:
>1083_bases ATGGACGACGAACTGAATTCCCGCCTGAAACCGCTGCGCGACCGCATCGATGCGATCGACGCGCAGCTGATCGCGCTCCT CAACCAGCGCGCCGCGGTGGCGCTCGAGGTAGGCGAGGTCAAGAAGCATTTCAACGCGCCGGTGTTTCGGCCGGAGCGCG AGCTGCAAGTGATCGCGCGCCTGCAGGACATGAGCGCGGGGCCGCTCGCGGGCGAGCACATCAGCGCCATCTGGCGCGAG ATCATGGCCGCGAGCCGCGCGCTCGAGCAGACGATCCACGTCGCATTCCTCGGGCCGGTCGGCACGTACAGCGAACAGGC GATGTTCGAGTATTTCGGCCAGTCGATCGAAGGGCTGCCGTGTCCGTCGATCGACGAGGTGTTCCGCTCGGTCGAGGCAG GCGCGGCCGCATTCGGCATCGCGCCCGTCGAGAATTCGACCGAAGGCGCGGTGTCGCGCACGCTCGATCTGCTGCTGCAA ACCCAGTTGCTGATCAGCGGCGAGCTCGCGCTGCCGATCCATCACAACCTGCTCACGCAGAGCGGCACGCTCGACGGCGT GACGCGCGTCTGCGCACATGCGCAGGCGCTCGCGCAATGCCAGCAGTGGCTTGCCGCGAACGCGCCGCAGCTCGAGCGGC AAGCGGTGTCGAGCAACGCGGAGGCCGCGCGCCTCGCGGCGGCCGACCCGAGCGTCGCGGCCATCGCCGGCGATCGCGCG GCCGCGCACTACGGGCTGCAGATCGCGTTCTCGCTGATCCAGGACGATCCGCACAACCGCACGCGCTTCGTGATCATCGG CAAGGAGCCGGCCGGACAGAGCGGTCACGACCAGACGTCGCTGATCGTGTCGGTGAAGAACGAGCCGGGCGCGGTGTTCA AGCTGCTCGAACCGCTCGCGCGGCACGGCGTGTCGATGACGCGCTTCGAGTCGCGTCCGGCGCGCGTCGGCACGTGGGAG TATTACTTCTACATCGACATCGAAGGGCACCGGGACGAGGCAGCCGTGGCCGCCGCACTCGCGGAGCTCGGCCAGAAGGC CGCGTTCCTGAAGATACTCGGTTCGTATCCGCGCGCGCGCTGA
Upstream 100 bases:
>100_bases GTGCCGCTCGAGGGCGTGAAGGCGCTCGTCGAGTACATGAAGGACTTCGAACAGCGCGGCGCCTGAGCGCGACGCTGTTC AAACAGCACGGCAACTACGC
Downstream 100 bases:
>100_bases CGCGCGGCGGCCCGTCACCCGCACCGCGCGGGCGGCGGGTGCAGCGGGCAGGGCAGGCCGGGTGGCACTGCCGAAGGCGG GCTCGGGCGGTATCCGGTGC
Product: chorismate mutase
Products: NA
Alternate protein names: Chorismate mutase; CM; Prephenate dehydratase; PDT [H]
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MDDELNSRLKPLRDRIDAIDAQLIALLNQRAAVALEVGEVKKHFNAPVFRPERELQVIARLQDMSAGPLAGEHISAIWRE IMAASRALEQTIHVAFLGPVGTYSEQAMFEYFGQSIEGLPCPSIDEVFRSVEAGAAAFGIAPVENSTEGAVSRTLDLLLQ TQLLISGELALPIHHNLLTQSGTLDGVTRVCAHAQALAQCQQWLAANAPQLERQAVSSNAEAARLAAADPSVAAIAGDRA AAHYGLQIAFSLIQDDPHNRTRFVIIGKEPAGQSGHDQTSLIVSVKNEPGAVFKLLEPLARHGVSMTRFESRPARVGTWE YYFYIDIEGHRDEAAVAAALAELGQKAAFLKILGSYPRAR
Sequences:
>Translated_360_residues MDDELNSRLKPLRDRIDAIDAQLIALLNQRAAVALEVGEVKKHFNAPVFRPERELQVIARLQDMSAGPLAGEHISAIWRE IMAASRALEQTIHVAFLGPVGTYSEQAMFEYFGQSIEGLPCPSIDEVFRSVEAGAAAFGIAPVENSTEGAVSRTLDLLLQ TQLLISGELALPIHHNLLTQSGTLDGVTRVCAHAQALAQCQQWLAANAPQLERQAVSSNAEAARLAAADPSVAAIAGDRA AAHYGLQIAFSLIQDDPHNRTRFVIIGKEPAGQSGHDQTSLIVSVKNEPGAVFKLLEPLARHGVSMTRFESRPARVGTWE YYFYIDIEGHRDEAAVAAALAELGQKAAFLKILGSYPRAR >Mature_360_residues MDDELNSRLKPLRDRIDAIDAQLIALLNQRAAVALEVGEVKKHFNAPVFRPERELQVIARLQDMSAGPLAGEHISAIWRE IMAASRALEQTIHVAFLGPVGTYSEQAMFEYFGQSIEGLPCPSIDEVFRSVEAGAAAFGIAPVENSTEGAVSRTLDLLLQ TQLLISGELALPIHHNLLTQSGTLDGVTRVCAHAQALAQCQQWLAANAPQLERQAVSSNAEAARLAAADPSVAAIAGDRA AAHYGLQIAFSLIQDDPHNRTRFVIIGKEPAGQSGHDQTSLIVSVKNEPGAVFKLLEPLARHGVSMTRFESRPARVGTWE YYFYIDIEGHRDEAAVAAALAELGQKAAFLKILGSYPRAR
Specific function: L-phenylalanine biosynthesis. [C]
COG id: COG0077
COG function: function code E; Prephenate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 prephenate dehydratase domain [H]
Homologues:
Organism=Escherichia coli, GI1788951, Length=372, Percent_Identity=33.6021505376344, Blast_Score=186, Evalue=3e-48, Organism=Saccharomyces cerevisiae, GI6324013, Length=324, Percent_Identity=26.2345679012346, Blast_Score=92, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR008242 - InterPro: IPR002701 - InterPro: IPR020822 - InterPro: IPR010957 - InterPro: IPR001086 - InterPro: IPR018528 [H]
Pfam domain/function: PF01842 ACT; PF01817 CM_2; PF00800 PDT [H]
EC number: =5.4.99.5; =4.2.1.51 [H]
Molecular weight: Translated: 38968; Mature: 38968
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: PS00858 PREPHENATE_DEHYDR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDELNSRLKPLRDRIDAIDAQLIALLNQRAAVALEVGEVKKHFNAPVFRPERELQVIAR CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEHHHHHHHHCCCCCCCHHHHHHHHH LQDMSAGPLAGEHISAIWREIMAASRALEQTIHVAFLGPVGTYSEQAMFEYFGQSIEGLP HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHCCCCCCCC CPSIDEVFRSVEAGAAAFGIAPVENSTEGAVSRTLDLLLQTQLLISGELALPIHHNLLTQ CCCHHHHHHHHHCCCHHEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHC SGTLDGVTRVCAHAQALAQCQQWLAANAPQLERQAVSSNAEAARLAAADPSVAAIAGDRA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHEECCCCCEEEEECCHH AAHYGLQIAFSLIQDDPHNRTRFVIIGKEPAGQSGHDQTSLIVSVKNEPGAVFKLLEPLA HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHH RHGVSMTRFESRPARVGTWEYYFYIDIEGHRDEAAVAAALAELGQKAAFLKILGSYPRAR HCCCEEEHHCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MDDELNSRLKPLRDRIDAIDAQLIALLNQRAAVALEVGEVKKHFNAPVFRPERELQVIAR CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEEHHHHHHHHCCCCCCCHHHHHHHHH LQDMSAGPLAGEHISAIWREIMAASRALEQTIHVAFLGPVGTYSEQAMFEYFGQSIEGLP HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHCCCCCCCC CPSIDEVFRSVEAGAAAFGIAPVENSTEGAVSRTLDLLLQTQLLISGELALPIHHNLLTQ CCCHHHHHHHHHCCCHHEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEECHHHHHHHC SGTLDGVTRVCAHAQALAQCQQWLAANAPQLERQAVSSNAEAARLAAADPSVAAIAGDRA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHEECCCCCEEEEECCHH AAHYGLQIAFSLIQDDPHNRTRFVIIGKEPAGQSGHDQTSLIVSVKNEPGAVFKLLEPLA HHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHH RHGVSMTRFESRPARVGTWEYYFYIDIEGHRDEAAVAAALAELGQKAAFLKILGSYPRAR HCCCEEEHHCCCCCCCCEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10094619 [H]