Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is 115350958

Identifier: 115350958

GI number: 115350958

Start: 994686

End: 994979

Strand: Direct

Name: 115350958

Synonym: Bamb_0904

Alternate gene names: NA

Gene position: 994686-994979 (Clockwise)

Preceding gene: 115350957

Following gene: 115350959

Centisome position: 27.97

GC content: 61.9

Gene sequence:

>294_bases
ATGACGGAACGTAGCGAGAAGCCGAAAGCGCCACGCGGAAGCATGTTTCGGGCTGACGTCAGCGACAATACAGACGAGGC
GGCGGAGGAAAGCATCCAGCCGCCCGCCTATTGGTCCAAGGGGGCTTTGCTGAACGTGCGCAACCGCGGAGACGCCTACG
TCGTCACGCTCTATCCGGAAGAGTTCGATGAGAGGCGGCCGGAGCGCGCTCTGCACTTCACGAATCTCGGGCTGTGTCAG
GGCTTCGTTAGTCGCTGGTACTCCCGGGAATCGCACGATCCGAGGGCGCGTTAA

Upstream 100 bases:

>100_bases
CGCTGATGCAAAAGGCCGCGAACCTTCAAAAATTGAGCAATACGGGGGTGCTCCAGTAATGGACGATCTACTTACCTCGC
CGCAGTCTTTAGGAGAAGAC

Downstream 100 bases:

>100_bases
GAATGACGTCTCCTGTTAAACAAACTGGCAAGAAACGCGTCGTCGGTGACGGTACGCCTGGGCCCGGACGCAAGAAGGGC
GTACCGAACAAGATGACGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MTERSEKPKAPRGSMFRADVSDNTDEAAEESIQPPAYWSKGALLNVRNRGDAYVVTLYPEEFDERRPERALHFTNLGLCQ
GFVSRWYSRESHDPRAR

Sequences:

>Translated_97_residues
MTERSEKPKAPRGSMFRADVSDNTDEAAEESIQPPAYWSKGALLNVRNRGDAYVVTLYPEEFDERRPERALHFTNLGLCQ
GFVSRWYSRESHDPRAR
>Mature_96_residues
TERSEKPKAPRGSMFRADVSDNTDEAAEESIQPPAYWSKGALLNVRNRGDAYVVTLYPEEFDERRPERALHFTNLGLCQG
FVSRWYSRESHDPRAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11218; Mature: 11087

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTERSEKPKAPRGSMFRADVSDNTDEAAEESIQPPAYWSKGALLNVRNRGDAYVVTLYPE
CCCCCCCCCCCCCCEEECCCCCCCCHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEECCH
EFDERRPERALHFTNLGLCQGFVSRWYSRESHDPRAR
HHHHCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TERSEKPKAPRGSMFRADVSDNTDEAAEESIQPPAYWSKGALLNVRNRGDAYVVTLYPE
CCCCCCCCCCCCCEEECCCCCCCCHHHHHCCCCCCCCCCCCEEEECCCCCEEEEEECCH
EFDERRPERALHFTNLGLCQGFVSRWYSRESHDPRAR
HHHHCCCHHHHHHCCHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA