| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is ftsK2 [H]
Identifier: 115350889
GI number: 115350889
Start: 921420
End: 923729
Strand: Direct
Name: ftsK2 [H]
Synonym: Bamb_0835
Alternate gene names: 115350889
Gene position: 921420-923729 (Clockwise)
Preceding gene: 115350885
Following gene: 115350890
Centisome position: 25.91
GC content: 67.23
Gene sequence:
>2310_bases ATGGCAAAAGCTCCTTATTCCGCCCAGGCACAGGCGTTGCCGCACCGGATGTCGAAGCTCCTCACGGAGATCCGCTGGAT TCTCCAGGTCGCGCTCTGCGCTTTTCTGGTGATGGCCCTGTTGAGCTACAGCCGGCGCGATCCGAGCTGGACGCACGCGG CGCAGGTGGACCACATCTCGAACTGGGCCGGCCGCGTGGGCGCGTGGACGGCCGACATCATCCTGCTGCTGTTCGGCCTG TCGGCCTACTGGCTGATCGTGCCGCTCGGACGGCGCATCGCGGTCAACTACCGGCGCATCACGCGTCACGAGGCGGTCGT CGACGAACCGGAGCGGCCGATCGGCTGGCTCACCGAGATCTTCGCGTTCGTGCTCGTCGTGCTCGCGTGCGACGGCATCG AGGCGCTGCGGATGTGGTCGCTGAAGGTGCAGTTGCCGCGCGCGCCGGGCGGCGTGATCGGCGAGGCCGTGGCCGGCGCG ATGTCGCACGCGTTCGGCTTCACCGGCGGCACGCTGCTGCTCCTGATCGCGCTCGCGATCGGCCTGTCGCTGTATTTCCG CTTCTCGTGGCTGTCGGTCGCCGAGCGCGTCGGCGGCGCGATCCTGTCTGCCGTGAACGTCGCGAAGCTGCGCCGTGAGG CCGAGCGCGACCGCAAGCTCGGCGAGGCCGCGGCCGTGCGCCGCGAAGGCAAGGTCGAGGAGGAGCGCGTGCGCATCGAG GATCACGAGCCCGTGACGATCGTGCCGCCGGTCGTCACGCCGGCGAAGTCCGAGCGCGTCGAGCGCGAGCGTCAGGTGCC GCTCTTCACCGACTTGCCGGGCGATTCGACGCTGCCGCCGGTGTCGCTGCTCGATCCCGCGCCGAAGACGCAGGAAGCGA TTTCCGCCGATACGCTCGAATTCACGTCGCGGCTGATCGAGAAGAAGCTGAAGGATTTCGGCGTCGAGGCGAGCGTCGTG GCCGCGTATCCGGGCCCGGTCGTCACGCGCTACGAGATCGAGCCGGCCACCGGCGTGAAGGGCAGCCAGATCGTCAACCT CGCGAAGGATCTCGCGCGTTCGCTGTCGCTCGTGTCGATCCGCGTGGTCGAGACGATCCCCGGCAAGAACTACATGGCGC TCGAGCTGCCGAACCAGCGCCGCCAGACGGTGCACCTGTCCGAGATCATCGGTTCTGAAGTCTATGCGGCCGCATCGTCG GCGCTGACCCTGAGCCTCGGCAAGGACATCGGCGGCAAGCCGGTGTGCGCGGATCTCGCGAAGATGCCGCACTTGCTGGT TGCGGGCACGACCGGTTCGGGCAAGTCGGTCGGGATCAACGCAATGATCCTGTCGCTGCTGTACAAGGCGACCGCCGAGC AGGTGCGCCTGATCCTGATCGATCCGAAGATGCTCGAAATGAGCGTCTACGAAGGCATTCCGCACCTGCTGTGCCCGGTC GTCACCGACATGCGCCAGGCCGGCCATGCGCTGAACTGGACGGTCGCGGAGATGGAGCGCCGCTACAAGCTGATGAGCAA GCTCGGCGTGCGCAACCTCGCCGGCTACAACAACAAGATCGACGACGCGGCGAAGCGCGAGGAAAAGATTCCGAATCCGT TCAGCCTGACGCCGGACGATCCCGAGCCGCTCGGCCGCCTGCCGAACATCGTCGTCGTGATCGACGAGCTCGCCGACCTG ATGATGGTCGTCGGCAAGAAGGTCGAGGAGCTGATCGCGCGGATCGCGCAGAAGGCGCGCGCGGCCGGCATTCACCTGAT CCTCGCGACGCAGCGTCCGTCCGTCGACGTGATCACCGGCCTGATCAAGGCGAACGTGCCGACGCGGATCGCGTTCCAGG TGTCGTCGAAGATCGACTCGCGCACGATTCTCGACCAGATGGGCGCCGAATCGCTGCTCGGGATGGGCGACATGCTGTAC CTGCCGCCGGGCAGCGGGCTGCCGGTGCGCGTGCACGGCGCGTTCGTCGCCGACGATGAAGTGCATCGCGTCGTCGAGAA GCTCAAGGAGCACGGCGAGCCGAACTACGTCGAAGGGCTGCTCGAGGGCGGCACCGCCGACGGCGACGAGGGGTCGGCCG GCGCGGGAACCGGTGAAGGCGGCAACGAGTCTGATCCGCTGTACGACCAGGCGGTCGAGATCGTCATCAAGAACCGCCGC GCGTCGATTTCGCTCGTGCAGCGCCATCTGCGGATCGGCTATAACCGCGCGGCGCGGCTGCTCGAGCAGATGGAACAGTC GGGGCTCGTGTCGGCGATGTCGTCGAGCGGCAACCGCGAAATTCTTGTGCCGGCGCGCGACGCGGAATGA
Upstream 100 bases:
>100_bases TATGTAACCGTCATTTACACTTGGCGGCCCGGTGCAGCGTTTACAATGAGCGCGATCGAACGACAGGCGGGCCCGCGGCC CGTCCTCTTTATACGGATTC
Downstream 100 bases:
>100_bases GTCCGCGGCGCCCGCGGCGCCGGCCACCCACGGAGAAAACCGCAATATGCAGCAACATTCGTTTGCATTGTCCCTTCGTT CGACGCGGCGCTGGCTCGGC
Product: cell divisionFtsK/SpoIIIE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 769; Mature: 768
Protein sequence:
>769_residues MAKAPYSAQAQALPHRMSKLLTEIRWILQVALCAFLVMALLSYSRRDPSWTHAAQVDHISNWAGRVGAWTADIILLLFGL SAYWLIVPLGRRIAVNYRRITRHEAVVDEPERPIGWLTEIFAFVLVVLACDGIEALRMWSLKVQLPRAPGGVIGEAVAGA MSHAFGFTGGTLLLLIALAIGLSLYFRFSWLSVAERVGGAILSAVNVAKLRREAERDRKLGEAAAVRREGKVEEERVRIE DHEPVTIVPPVVTPAKSERVERERQVPLFTDLPGDSTLPPVSLLDPAPKTQEAISADTLEFTSRLIEKKLKDFGVEASVV AAYPGPVVTRYEIEPATGVKGSQIVNLAKDLARSLSLVSIRVVETIPGKNYMALELPNQRRQTVHLSEIIGSEVYAAASS ALTLSLGKDIGGKPVCADLAKMPHLLVAGTTGSGKSVGINAMILSLLYKATAEQVRLILIDPKMLEMSVYEGIPHLLCPV VTDMRQAGHALNWTVAEMERRYKLMSKLGVRNLAGYNNKIDDAAKREEKIPNPFSLTPDDPEPLGRLPNIVVVIDELADL MMVVGKKVEELIARIAQKARAAGIHLILATQRPSVDVITGLIKANVPTRIAFQVSSKIDSRTILDQMGAESLLGMGDMLY LPPGSGLPVRVHGAFVADDEVHRVVEKLKEHGEPNYVEGLLEGGTADGDEGSAGAGTGEGGNESDPLYDQAVEIVIKNRR ASISLVQRHLRIGYNRAARLLEQMEQSGLVSAMSSSGNREILVPARDAE
Sequences:
>Translated_769_residues MAKAPYSAQAQALPHRMSKLLTEIRWILQVALCAFLVMALLSYSRRDPSWTHAAQVDHISNWAGRVGAWTADIILLLFGL SAYWLIVPLGRRIAVNYRRITRHEAVVDEPERPIGWLTEIFAFVLVVLACDGIEALRMWSLKVQLPRAPGGVIGEAVAGA MSHAFGFTGGTLLLLIALAIGLSLYFRFSWLSVAERVGGAILSAVNVAKLRREAERDRKLGEAAAVRREGKVEEERVRIE DHEPVTIVPPVVTPAKSERVERERQVPLFTDLPGDSTLPPVSLLDPAPKTQEAISADTLEFTSRLIEKKLKDFGVEASVV AAYPGPVVTRYEIEPATGVKGSQIVNLAKDLARSLSLVSIRVVETIPGKNYMALELPNQRRQTVHLSEIIGSEVYAAASS ALTLSLGKDIGGKPVCADLAKMPHLLVAGTTGSGKSVGINAMILSLLYKATAEQVRLILIDPKMLEMSVYEGIPHLLCPV VTDMRQAGHALNWTVAEMERRYKLMSKLGVRNLAGYNNKIDDAAKREEKIPNPFSLTPDDPEPLGRLPNIVVVIDELADL MMVVGKKVEELIARIAQKARAAGIHLILATQRPSVDVITGLIKANVPTRIAFQVSSKIDSRTILDQMGAESLLGMGDMLY LPPGSGLPVRVHGAFVADDEVHRVVEKLKEHGEPNYVEGLLEGGTADGDEGSAGAGTGEGGNESDPLYDQAVEIVIKNRR ASISLVQRHLRIGYNRAARLLEQMEQSGLVSAMSSSGNREILVPARDAE >Mature_768_residues AKAPYSAQAQALPHRMSKLLTEIRWILQVALCAFLVMALLSYSRRDPSWTHAAQVDHISNWAGRVGAWTADIILLLFGLS AYWLIVPLGRRIAVNYRRITRHEAVVDEPERPIGWLTEIFAFVLVVLACDGIEALRMWSLKVQLPRAPGGVIGEAVAGAM SHAFGFTGGTLLLLIALAIGLSLYFRFSWLSVAERVGGAILSAVNVAKLRREAERDRKLGEAAAVRREGKVEEERVRIED HEPVTIVPPVVTPAKSERVERERQVPLFTDLPGDSTLPPVSLLDPAPKTQEAISADTLEFTSRLIEKKLKDFGVEASVVA AYPGPVVTRYEIEPATGVKGSQIVNLAKDLARSLSLVSIRVVETIPGKNYMALELPNQRRQTVHLSEIIGSEVYAAASSA LTLSLGKDIGGKPVCADLAKMPHLLVAGTTGSGKSVGINAMILSLLYKATAEQVRLILIDPKMLEMSVYEGIPHLLCPVV TDMRQAGHALNWTVAEMERRYKLMSKLGVRNLAGYNNKIDDAAKREEKIPNPFSLTPDDPEPLGRLPNIVVVIDELADLM MVVGKKVEELIARIAQKARAAGIHLILATQRPSVDVITGLIKANVPTRIAFQVSSKIDSRTILDQMGAESLLGMGDMLYL PPGSGLPVRVHGAFVADDEVHRVVEKLKEHGEPNYVEGLLEGGTADGDEGSAGAGTGEGGNESDPLYDQAVEIVIKNRRA SISLVQRHLRIGYNRAARLLEQMEQSGLVSAMSSSGNREILVPARDAE
Specific function: DNA motor protein, which is both required to move DNA out of the region of the septum during cell division and for the septum formation. Tracks DNA in an ATP-dependent manner by generating positive supercoils in front of it and negative supercoils behind
COG id: COG1674
COG function: function code D; DNA segregation ATPase FtsK/SpoIIIE and related proteins
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein; Cytoplasmic side. Note=Located at the septum. The large C-terminal part of the protein is cytoplasmic (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FtsK domain [H]
Homologues:
Organism=Escherichia coli, GI1787117, Length=494, Percent_Identity=63.9676113360324, Blast_Score=612, Evalue=1e-176,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR018541 - InterPro: IPR002543 [H]
Pfam domain/function: PF09397 Ftsk_gamma; PF01580 FtsK_SpoIIIE [H]
EC number: NA
Molecular weight: Translated: 83618; Mature: 83487
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: PS50901 FTSK
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKAPYSAQAQALPHRMSKLLTEIRWILQVALCAFLVMALLSYSRRDPSWTHAAQVDHIS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH NWAGRVGAWTADIILLLFGLSAYWLIVPLGRRIAVNYRRITRHEAVVDEPERPIGWLTEI HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHH FAFVLVVLACDGIEALRMWSLKVQLPRAPGGVIGEAVAGAMSHAFGFTGGTLLLLIALAI HHHHHHHHHCCCHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GLSLYFRFSWLSVAERVGGAILSAVNVAKLRREAERDRKLGEAAAVRREGKVEEERVRIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEC DHEPVTIVPPVVTPAKSERVERERQVPLFTDLPGDSTLPPVSLLDPAPKTQEAISADTLE CCCCEEEECCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCHHCCCCCCHHHHHHHHHHH FTSRLIEKKLKDFGVEASVVAAYPGPVVTRYEIEPATGVKGSQIVNLAKDLARSLSLVSI HHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEE RVVETIPGKNYMALELPNQRRQTVHLSEIIGSEVYAAASSALTLSLGKDIGGKPVCADLA EEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHH KMPHLLVAGTTGSGKSVGINAMILSLLYKATAEQVRLILIDPKMLEMSVYEGIPHLLCPV HCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHCCHHHHHHH VTDMRQAGHALNWTVAEMERRYKLMSKLGVRNLAGYNNKIDDAAKREEKIPNPFSLTPDD HHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCC PEPLGRLPNIVVVIDELADLMMVVGKKVEELIARIAQKARAAGIHLILATQRPSVDVITG CHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHH LIKANVPTRIAFQVSSKIDSRTILDQMGAESLLGMGDMLYLPPGSGLPVRVHGAFVADDE HHHCCCCCEEEEEEHHCCHHHHHHHHHCHHHHHCCCCEEEECCCCCCEEEEEEEEECCHH VHRVVEKLKEHGEPNYVEGLLEGGTADGDEGSAGAGTGEGGNESDPLYDQAVEIVIKNRR HHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC ASISLVQRHLRIGYNRAARLLEQMEQSGLVSAMSSSGNREILVPARDAE HHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHCCCCCEEEECCCCCC >Mature Secondary Structure AKAPYSAQAQALPHRMSKLLTEIRWILQVALCAFLVMALLSYSRRDPSWTHAAQVDHIS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH NWAGRVGAWTADIILLLFGLSAYWLIVPLGRRIAVNYRRITRHEAVVDEPERPIGWLTEI HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHH FAFVLVVLACDGIEALRMWSLKVQLPRAPGGVIGEAVAGAMSHAFGFTGGTLLLLIALAI HHHHHHHHHCCCHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH GLSLYFRFSWLSVAERVGGAILSAVNVAKLRREAERDRKLGEAAAVRREGKVEEERVRIE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEC DHEPVTIVPPVVTPAKSERVERERQVPLFTDLPGDSTLPPVSLLDPAPKTQEAISADTLE CCCCEEEECCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCHHCCCCCCHHHHHHHHHHH FTSRLIEKKLKDFGVEASVVAAYPGPVVTRYEIEPATGVKGSQIVNLAKDLARSLSLVSI HHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEE RVVETIPGKNYMALELPNQRRQTVHLSEIIGSEVYAAASSALTLSLGKDIGGKPVCADLA EEEEECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHH KMPHLLVAGTTGSGKSVGINAMILSLLYKATAEQVRLILIDPKMLEMSVYEGIPHLLCPV HCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHCCHHHHHHH VTDMRQAGHALNWTVAEMERRYKLMSKLGVRNLAGYNNKIDDAAKREEKIPNPFSLTPDD HHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCC PEPLGRLPNIVVVIDELADLMMVVGKKVEELIARIAQKARAAGIHLILATQRPSVDVITG CHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHH LIKANVPTRIAFQVSSKIDSRTILDQMGAESLLGMGDMLYLPPGSGLPVRVHGAFVADDE HHHCCCCCEEEEEEHHCCHHHHHHHHHCHHHHHCCCCEEEECCCCCCEEEEEEEEECCHH VHRVVEKLKEHGEPNYVEGLLEGGTADGDEGSAGAGTGEGGNESDPLYDQAVEIVIKNRR HHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC ASISLVQRHLRIGYNRAARLLEQMEQSGLVSAMSSSGNREILVPARDAE HHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHCCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]