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The map label for this gene is 115350866

Identifier: 115350866

GI number: 115350866

Start: 897315

End: 898433

Strand: Direct

Name: 115350866

Synonym: Bamb_0812

Alternate gene names: NA

Gene position: 897315-898433 (Clockwise)

Preceding gene: 115350863

Following gene: 115350867

Centisome position: 25.23

GC content: 69.97

Gene sequence:

>1119_bases
ATGAACGCTTGGTTATCGTGGCGTCCCAATGAGCAGCATGCGCAGATCGTGCGCGACATGCTGCGTCGCGGGACGCGTGT
CAGTCACCATTTATTCAGCGTTGTCGGCTGTTTTGCCGTCGCGATCGCACTGGCCCTGTGGCTGCTGCCGACCGTGCGCG
GGAACATCGCCGCGAAGCTGATGCCGGTCGTGTCCGCGGCCGTGCAGGCCGGTCCGGCCCGTCTGCTGACCGGTCATCCG
CTGCCGAACTTCGCGCCTGCCGGCGCGCAGCCGCAGCAGGAAGACACCCCCGAACCGGATGCGCTCGCCGTCGGTCTCGA
CGTCGCACCGGAAACCGCCGCGCAGAACGATGCGTCCGATCCGGCCCGCAACGGCCCGTCGCCCGTCGCGCTCGCGAAAC
TGATCCCGACCCAGCGGGTTCCGGCCGATGCGCGCGACGATCGTGCGCTCGCGTCGAACCGTGAACAGGCGCTCGTCGCC
ACTTACCTGTCGCGCCGTTACCGGGTCGCGCAGGAGCCGCTCGGCCAGCTCGTCAAGGCTGCGTTCCAGACCGGTCGCGA
CGTCGGCCTCGATCCGCTGCTGCTGCTGTCCGTGATGGCGATCGAATCGGGCTTCAACCCGTACGCGGAAAGCGGCGTCG
GCGCGCAGGGCCTGATGCAGGTCATGTCGAAGGTCCATTCCGACAAGTTCGAATATTTCGGCGGTACCGACACCGCGCTG
CAACCGCTCGCGAACCTGCAGGTCGGCGCGCTCGTGCTGAAGGACTGCATCGCCCGCGGCGGCTCGCTCGCGAACGGCCT
GCGCATGTACAACGGCTCGACCAACCCGGACGACACCGCCTACGGCTCGAAGGTCATGGCCGAGCGTGCCCGCCTGCGCG
ACGTCGCGCATGGCCGCAGCGTGCCGCTCAATGCGCCGGCCCAGCCGTCGAAGCCGATCGTGACCGCGTCCGCGACGGCA
GCGGCCGGCGGCGCGAAGCGCGTGCACGCGACGCTCGACGCCGCGCAGCCGATCGCCGCGAAGGCTGCCGCCGTGCCGAA
GGGCGCGCCGCAGCAGGACGCCGCCAGCGTCGACACCGCGAAGCAGTCGCACGGCGACCACCCGGAACTCGGCGCGTAA

Upstream 100 bases:

>100_bases
CCCAACCAAGGCGGGCGGCATCGTGATTCCGCGGCACGTATTCTGTCTCGCCATCGAGCTGAGCGAGCCGCACGAGTCAT
GTTCATGGGAGATGATCTGA

Downstream 100 bases:

>100_bases
CGCCACGCGGTTCCAGCCGGACCCAAGAAAAAAGGCACCCGATTGAACTGCACCCCAAAAGTTGGACACCCGTCCAACCT
TTGGGGTGTTTTTCATGACG

Product: lytic transglycosylase catalytic subunit

Products: NA

Alternate protein names: Transglycosylase; Transglycosylase SLT Family Protein; Transglycosylase SLT Family; Lytic Transglycosylase; Transglycosylase SLT Domain-Containing Lipoprotein; Transmembrane Protein; Transglycosylase Protein; Transglycosylase SLT Domain-Containing; Transmembrane Transglycosylase SLT Family Protein

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MNAWLSWRPNEQHAQIVRDMLRRGTRVSHHLFSVVGCFAVAIALALWLLPTVRGNIAAKLMPVVSAAVQAGPARLLTGHP
LPNFAPAGAQPQQEDTPEPDALAVGLDVAPETAAQNDASDPARNGPSPVALAKLIPTQRVPADARDDRALASNREQALVA
TYLSRRYRVAQEPLGQLVKAAFQTGRDVGLDPLLLLSVMAIESGFNPYAESGVGAQGLMQVMSKVHSDKFEYFGGTDTAL
QPLANLQVGALVLKDCIARGGSLANGLRMYNGSTNPDDTAYGSKVMAERARLRDVAHGRSVPLNAPAQPSKPIVTASATA
AAGGAKRVHATLDAAQPIAAKAAAVPKGAPQQDAASVDTAKQSHGDHPELGA

Sequences:

>Translated_372_residues
MNAWLSWRPNEQHAQIVRDMLRRGTRVSHHLFSVVGCFAVAIALALWLLPTVRGNIAAKLMPVVSAAVQAGPARLLTGHP
LPNFAPAGAQPQQEDTPEPDALAVGLDVAPETAAQNDASDPARNGPSPVALAKLIPTQRVPADARDDRALASNREQALVA
TYLSRRYRVAQEPLGQLVKAAFQTGRDVGLDPLLLLSVMAIESGFNPYAESGVGAQGLMQVMSKVHSDKFEYFGGTDTAL
QPLANLQVGALVLKDCIARGGSLANGLRMYNGSTNPDDTAYGSKVMAERARLRDVAHGRSVPLNAPAQPSKPIVTASATA
AAGGAKRVHATLDAAQPIAAKAAAVPKGAPQQDAASVDTAKQSHGDHPELGA
>Mature_372_residues
MNAWLSWRPNEQHAQIVRDMLRRGTRVSHHLFSVVGCFAVAIALALWLLPTVRGNIAAKLMPVVSAAVQAGPARLLTGHP
LPNFAPAGAQPQQEDTPEPDALAVGLDVAPETAAQNDASDPARNGPSPVALAKLIPTQRVPADARDDRALASNREQALVA
TYLSRRYRVAQEPLGQLVKAAFQTGRDVGLDPLLLLSVMAIESGFNPYAESGVGAQGLMQVMSKVHSDKFEYFGGTDTAL
QPLANLQVGALVLKDCIARGGSLANGLRMYNGSTNPDDTAYGSKVMAERARLRDVAHGRSVPLNAPAQPSKPIVTASATA
AAGGAKRVHATLDAAQPIAAKAAAVPKGAPQQDAASVDTAKQSHGDHPELGA

Specific function: Unknown

COG id: COG0741

COG function: function code M; Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38893; Mature: 38893

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAWLSWRPNEQHAQIVRDMLRRGTRVSHHLFSVVGCFAVAIALALWLLPTVRGNIAAKL
CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MPVVSAAVQAGPARLLTGHPLPNFAPAGAQPQQEDTPEPDALAVGLDVAPETAAQNDASD
HHHHHHHHHCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHCCCCCCC
PARNGPSPVALAKLIPTQRVPADARDDRALASNREQALVATYLSRRYRVAQEPLGQLVKA
CCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFQTGRDVGLDPLLLLSVMAIESGFNPYAESGVGAQGLMQVMSKVHSDKFEYFGGTDTAL
HHHCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH
QPLANLQVGALVLKDCIARGGSLANGLRMYNGSTNPDDTAYGSKVMAERARLRDVAHGRS
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
VPLNAPAQPSKPIVTASATAAAGGAKRVHATLDAAQPIAAKAAAVPKGAPQQDAASVDTA
CCCCCCCCCCCCEEEECCHHHCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHH
KQSHGDHPELGA
HHHCCCCCCCCC
>Mature Secondary Structure
MNAWLSWRPNEQHAQIVRDMLRRGTRVSHHLFSVVGCFAVAIALALWLLPTVRGNIAAKL
CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MPVVSAAVQAGPARLLTGHPLPNFAPAGAQPQQEDTPEPDALAVGLDVAPETAAQNDASD
HHHHHHHHHCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHCCCCCCC
PARNGPSPVALAKLIPTQRVPADARDDRALASNREQALVATYLSRRYRVAQEPLGQLVKA
CCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFQTGRDVGLDPLLLLSVMAIESGFNPYAESGVGAQGLMQVMSKVHSDKFEYFGGTDTAL
HHHCCCCCCCCHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH
QPLANLQVGALVLKDCIARGGSLANGLRMYNGSTNPDDTAYGSKVMAERARLRDVAHGRS
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
VPLNAPAQPSKPIVTASATAAAGGAKRVHATLDAAQPIAAKAAAVPKGAPQQDAASVDTA
CCCCCCCCCCCCEEEECCHHHCCCHHHHHHHHHHHCHHHHHHHHCCCCCCCHHHHHHHHH
KQSHGDHPELGA
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA