| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115350756
Identifier: 115350756
GI number: 115350756
Start: 778888
End: 780192
Strand: Direct
Name: 115350756
Synonym: Bamb_0702
Alternate gene names: NA
Gene position: 778888-780192 (Clockwise)
Preceding gene: 115350755
Following gene: 115350761
Centisome position: 21.9
GC content: 68.81
Gene sequence:
>1305_bases ATGAGCGAACCCCAAGACTGGCGCGCGACACTCGATCCGGCTCGCAAGAGCTGGGTCGAGACGGCGAACGATCCCGCCTG CGATTTCCCGATCCAGAACCTGCCGTTCGGGATCTTCAGCGATGCGAAGCAGGCGGCGCGCCGCGCGGGCGTCGCGCTCG GCGACCAGATCGTCGACCTCGCCGCGCTCGCGCGTACGGGCCTCGTGACGCTTCCGGCCGGCGCCGACGTGTTCGGCGCG CCGACGCTCAACCCGTTCATCGCGCTCGGCCGCGATGCATGGCGCAGCGTGCGCGTGCAGCTGTCGCAGCTGTTCTCGCG CGACGACGCGCGGCTGCGCGATGACGCCGCGCTGCGCGCGCAGGTGCTCGTCGCGCAGCGCGACGCGACGCTGCATCTGC CGGTCGACATTCCCGGCTACACCGATTTCTATTCGTCGAAGGAGCATGCGACCAACGTCGGCTCGATGTTCCGTGATCCG AAGAATGCGCTGATGCCGAACTGGTCGGAGATGCCGATCGGTTACAACGGCCGCGCGTCGTCGGTGGTCGTGAGCGGCAC GCCGGTGCGGCGCCCGAGCGGGCAACTGAAGCTGCCCGACGCGGAGCGTCCGGTGTTCGGCGCGTGCCGCAAGCTCGACC TCGAACTCGAGACGGGCTTCATCGTCGGCCGCGGTAACGCGCTCGGCGAACCGATCGCGTGCGAGGACGCCGAAGCGCAT ATCTTCGGGATGGTGCTGCTCAACGACTGGAGCGCGCGCGACATCCAGCAGTGGGAATACGTGCCGCTCGGCCCGTTCAA TTCGAAGGGCTTCGCGACGACGATCTCGCCGTGGATCGTCACGCTCGACGCGCTCGAACCGTTCCGCGTCGCGCAGCCCG AGCAGTCGCCGCAGCCGCTCGCGTATCTGCGCCACGCGGGCAAGCATGCGTTCGACATCGCGCTCGAAGTGACGCTGCGC GCGCGAGGGGCGGCCGAAGCGACGTCGATCTGCCGCACCAACTTCAAGTACATGTACTGGACGATGGCGCAGCAGCTCGC GCATCACACGGTCGCGGGCTGCAACACGCGCGTCGGCGACCTGATGGGCTCGGGGACGATCAGCGGGCCCACCAAGGACT CGTTCGGCAGCCTGCTCGAACTGACGTGGAACGGCAAGGAGCCGCTCGCGCTGAACGGCGGCGGCAGCCGCACGTTCATC GAGGACGGCGACGAGCTCACGCTCACGGGCTGGTGCCAGGGCGACGGCTATCGCGTCGGGTTCGGCGTGTGTGCGGGCAA GATTCTGCCCGCGCGGAGCGCGTGA
Upstream 100 bases:
>100_bases TGATCCGTCCGACGCGCTACGCGCTCGACACCGCGCAGCTGCAGCCCGACTACTTCGAATGCTGGCAAGGCATCAGGAAA CATTTCAATCCGGAGCAACC
Downstream 100 bases:
>100_bases CAGGTCCCGCGGGATTCGGAAGGACAGGGCGGCCCGCATCGCGCGGGCCGTTTTCGTTGGGGGCAGCGAGTGGCGGTGCG GATGCGCTCGCATGTACCGA
Product: fumarylacetoacetase
Products: acetoacetate; fumarate
Alternate protein names: Fumarylacetoacetate Hydrolase; Hydroxylase; Fumarylacetoacetate Hydrolase Family Protein; Fumarylacetoacetase Hydrolase; 2-Hydroxyhepta-2 4-Diene-1 7-Dioate Isomerase; LOW QUALITY PROTEIN Fumarylacetoacetase
Number of amino acids: Translated: 434; Mature: 433
Protein sequence:
>434_residues MSEPQDWRATLDPARKSWVETANDPACDFPIQNLPFGIFSDAKQAARRAGVALGDQIVDLAALARTGLVTLPAGADVFGA PTLNPFIALGRDAWRSVRVQLSQLFSRDDARLRDDAALRAQVLVAQRDATLHLPVDIPGYTDFYSSKEHATNVGSMFRDP KNALMPNWSEMPIGYNGRASSVVVSGTPVRRPSGQLKLPDAERPVFGACRKLDLELETGFIVGRGNALGEPIACEDAEAH IFGMVLLNDWSARDIQQWEYVPLGPFNSKGFATTISPWIVTLDALEPFRVAQPEQSPQPLAYLRHAGKHAFDIALEVTLR ARGAAEATSICRTNFKYMYWTMAQQLAHHTVAGCNTRVGDLMGSGTISGPTKDSFGSLLELTWNGKEPLALNGGGSRTFI EDGDELTLTGWCQGDGYRVGFGVCAGKILPARSA
Sequences:
>Translated_434_residues MSEPQDWRATLDPARKSWVETANDPACDFPIQNLPFGIFSDAKQAARRAGVALGDQIVDLAALARTGLVTLPAGADVFGA PTLNPFIALGRDAWRSVRVQLSQLFSRDDARLRDDAALRAQVLVAQRDATLHLPVDIPGYTDFYSSKEHATNVGSMFRDP KNALMPNWSEMPIGYNGRASSVVVSGTPVRRPSGQLKLPDAERPVFGACRKLDLELETGFIVGRGNALGEPIACEDAEAH IFGMVLLNDWSARDIQQWEYVPLGPFNSKGFATTISPWIVTLDALEPFRVAQPEQSPQPLAYLRHAGKHAFDIALEVTLR ARGAAEATSICRTNFKYMYWTMAQQLAHHTVAGCNTRVGDLMGSGTISGPTKDSFGSLLELTWNGKEPLALNGGGSRTFI EDGDELTLTGWCQGDGYRVGFGVCAGKILPARSA >Mature_433_residues SEPQDWRATLDPARKSWVETANDPACDFPIQNLPFGIFSDAKQAARRAGVALGDQIVDLAALARTGLVTLPAGADVFGAP TLNPFIALGRDAWRSVRVQLSQLFSRDDARLRDDAALRAQVLVAQRDATLHLPVDIPGYTDFYSSKEHATNVGSMFRDPK NALMPNWSEMPIGYNGRASSVVVSGTPVRRPSGQLKLPDAERPVFGACRKLDLELETGFIVGRGNALGEPIACEDAEAHI FGMVLLNDWSARDIQQWEYVPLGPFNSKGFATTISPWIVTLDALEPFRVAQPEQSPQPLAYLRHAGKHAFDIALEVTLRA RGAAEATSICRTNFKYMYWTMAQQLAHHTVAGCNTRVGDLMGSGTISGPTKDSFGSLLELTWNGKEPLALNGGGSRTFIE DGDELTLTGWCQGDGYRVGFGVCAGKILPARSA
Specific function: Unknown
COG id: COG0179
COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4557587, Length=417, Percent_Identity=59.4724220623501, Blast_Score=525, Evalue=1e-149, Organism=Caenorhabditis elegans, GI17568863, Length=418, Percent_Identity=55.5023923444976, Blast_Score=469, Evalue=1e-132, Organism=Drosophila melanogaster, GI24657182, Length=407, Percent_Identity=52.3341523341523, Blast_Score=427, Evalue=1e-120,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.7.1.2
Molecular weight: Translated: 47089; Mature: 46958
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPQDWRATLDPARKSWVETANDPACDFPIQNLPFGIFSDAKQAARRAGVALGDQIVDL CCCCCCHHHHCCHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCHHHHHHHHH AALARTGLVTLPAGADVFGAPTLNPFIALGRDAWRSVRVQLSQLFSRDDARLRDDAALRA HHHHHCCEEEECCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHE QVLVAQRDATLHLPVDIPGYTDFYSSKEHATNVGSMFRDPKNALMPNWSEMPIGYNGRAS EEEEEECCCEEEEEEECCCCCHHCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCC SVVVSGTPVRRPSGQLKLPDAERPVFGACRKLDLELETGFIVGRGNALGEPIACEDAEAH EEEEECCCCCCCCCCEECCCCCCCHHHHHHEEEEEEECCEEEECCCCCCCCCCCCCCCCE IFGMVLLNDWSARDIQQWEYVPLGPFNSKGFATTISPWIVTLDALEPFRVAQPEQSPQPL EEEEEEECCCCCCCCCCCCEEECCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCHH AYLRHAGKHAFDIALEVTLRARGAAEATSICRTNFKYMYWTMAQQLAHHTVAGCNTRVGD HHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHH LMGSGTISGPTKDSFGSLLELTWNGKEPLALNGGGSRTFIEDGDELTLTGWCQGDGYRVG HCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCEEECCCEEEEEEEECCCCEEEE FGVCAGKILPARSA HHHHCCCEECCCCC >Mature Secondary Structure SEPQDWRATLDPARKSWVETANDPACDFPIQNLPFGIFSDAKQAARRAGVALGDQIVDL CCCCCHHHHCCHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHCCCHHHHHHHHH AALARTGLVTLPAGADVFGAPTLNPFIALGRDAWRSVRVQLSQLFSRDDARLRDDAALRA HHHHHCCEEEECCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHE QVLVAQRDATLHLPVDIPGYTDFYSSKEHATNVGSMFRDPKNALMPNWSEMPIGYNGRAS EEEEEECCCEEEEEEECCCCCHHCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCC SVVVSGTPVRRPSGQLKLPDAERPVFGACRKLDLELETGFIVGRGNALGEPIACEDAEAH EEEEECCCCCCCCCCEECCCCCCCHHHHHHEEEEEEECCEEEECCCCCCCCCCCCCCCCE IFGMVLLNDWSARDIQQWEYVPLGPFNSKGFATTISPWIVTLDALEPFRVAQPEQSPQPL EEEEEEECCCCCCCCCCCCEEECCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCCHH AYLRHAGKHAFDIALEVTLRARGAAEATSICRTNFKYMYWTMAQQLAHHTVAGCNTRVGD HHHHHCCCCEEEEEEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHH LMGSGTISGPTKDSFGSLLELTWNGKEPLALNGGGSRTFIEDGDELTLTGWCQGDGYRVG HCCCCCCCCCCCCCCCCEEEEEECCCCCEEECCCCCCCEEECCCEEEEEEEECCCCEEEE FGVCAGKILPARSA HHHHCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-fumarylacetoacetate; H2O
Specific reaction: 4-fumarylacetoacetate + H2O = acetoacetate + fumarate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA