| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is pabB [H]
Identifier: 115350702
GI number: 115350702
Start: 729511
End: 731430
Strand: Direct
Name: pabB [H]
Synonym: Bamb_0648
Alternate gene names: 115350702
Gene position: 729511-731430 (Clockwise)
Preceding gene: 115350701
Following gene: 115350709
Centisome position: 20.51
GC content: 69.48
Gene sequence:
>1920_bases ATGACTGAAGGCAACGAGAGCGCGTCATTCGCGCTCTTGGACGATTGCGACTCGACCGCGGTTGCGCGGTCGAGTCGTTT GTATTCCGGTTTCGTGCGCGAACGCGTCTGCACGGATCCGGCGCGGCTCGACGAAGTCGATGCGGCGGTGGCGCAGGACT TGCGCGACGGGCTGCATGCGGTGGTCGTCGGCGATTACGAATTCGGACGCAATCTGGAAAGAGCGCAGCCGGGCCATGCC CCGCTGCGCTTTTTGCTGTATGCGCGCTGCGAGCGCCTGTCGCGCGACGAAGTCGACGCGTGGCTCGCGCAGCAGGATGG CGGCGGCGCGCCGTCGATCGCGGGCGTCGCCCACGTCGCGAAGAGCGTGTCGCGCGATGTGTTCGACGCGGCGATCGCCG CCGTGCACGAAGCACTGCGCGCGGGCGACTCGTACCAGATCAACTATACGTACCGGCTGAATTTCGACATGTTCGGCACG CCGACCGCGCTGTACCGGCGGCTGCGCGCGCGGCAGCCCGTGCGTTACGGCGCGCTGATCGCGCTGCCTTGCGGCGCGTG GGTCGTGTCGTGCTCGCCGGAGCTGTTCGTCGAGAAGCACGGCGACGTGCTGCGCGCGCGGCCGATGAAGGGCACCGCGC CGCGCTCGGCCGATCCGCGTGACGATGCGGCGGCGGCCGCGTTCCTCGCGAACGATCCGAAGAACCGCGCGGAAAACGTG ATGATCGTCGACTTGCTGCGCAACGACGTGTCGCGGATCGCGCGCACGGGCACTGTCAAGGTGCCGGCGCTGTTCTCGGT CGAGCCGTATGCGTCGGTATGGCAGATGACGTCGACGGTCGAGGCCGGCTGGCGCGACGGGACGACGTTCGCGCAGATGC TGCGCGCGCTGTTTCCGTGCGGATCGATCACCGGTGCGCCGAAGCACAAGACGATGGAACTGATCGACGCGATAGAGTCG ACGCCGCGCGGCCTCTATACGGGCGCGATCGGCTGGCTCGATGCGCGGAAGGAAGATCAGTCGACAGGCGATGCGGGCCC GGGCGGCATGGCCGGCTGCGGCGATTTCTGCCTGTCGGTCGCGATCCGGACGCTCACGCTCGATGCGGTCGGTATCGATG CTATCGCAACGGTCGGCGCGCGCGACGCGGCGGCTCGCCGGGCCGGCCGGCGGCGCGGCACGATGGGGGTCGGCGCGGGC ATCGTGCTCGACAGCGTGGCCGCCGACGAATATGCGGAGTGTGAATTGAAAGCACGATTCCTGACCGACGCCGATCCCGG CTTCCAGTTGTTCGAAACCATGGCGGCCACCCGTGCGGACGGCGTCCGGCATCTCGAGCGCCATCTCGCCCGGCTGCAGG GCAGCGCGGATGCGTTCGGCTTCCGCCTCGACGCCGACGCGTTGCGTCGCGAGGTCGACGCGCGCTGCGCGGCGCTCGAC GGCGATGGCCCGTACCGGATGAAGCTCGCGCTCGCGAAGGACGCCGCGGTCGAGATCACGGCCGCGCCGCTGAAGCCGCT GCCTGCGGGGCCGGTCGGCGTGATGCTGGCGTCCGAGCACGGCTTTGCGCCGACCCGCACCGACGATGCGCTGCTGCTGC ACAAGACCACGCGCCGTGCGGAATACGACCGTGCATGGCAGGCGGCGGAAGCGCTCGGCGGCTTCGACATGCTGTTCGTC AACGAGCGCGGCGAGGTGACGGAAGGCGGGCGCTCGAACCTGTTCGTGAAGCTCGACGGCCAGTGGGTGACGCCGCCGCT GGCGAGTGGCGTGTTGCCGGGCGTGATGCGCGGCGTGCTGCTCGACGACCGCGCGTTCGGCGCGGTGGAGCGTATCGTCA CGCGTGACGACCTTGCGCGCGCGCAAGCGCTGCTGCTGACCAACGCGCTGCGTGGCGCGCTCGACGCGGTATTGACATGA
Upstream 100 bases:
>100_bases CTCAAGCAGTTCGAGAAGTCGCTGGCCGAGGGCGGTGCGCGTCACAGCCCGCAGAGCAAGAGCTGGTTCGACCGGGTGAA GAGCTTCTTCGAGTAACGGC
Downstream 100 bases:
>100_bases CGCACTGAGGGTTCGGGCAGCGTGCCCGAAGGACCGGTGCCGCACACCTTCGGCAACCGGGCGTCCAGACAAAAAAGCGC GGCACCCCACAAAGGGTGCC
Product: anthranilate synthase component I/chorismate-binding protein
Products: NA
Alternate protein names: ADC synthase; Para-aminobenzoate synthase component I [H]
Number of amino acids: Translated: 639; Mature: 638
Protein sequence:
>639_residues MTEGNESASFALLDDCDSTAVARSSRLYSGFVRERVCTDPARLDEVDAAVAQDLRDGLHAVVVGDYEFGRNLERAQPGHA PLRFLLYARCERLSRDEVDAWLAQQDGGGAPSIAGVAHVAKSVSRDVFDAAIAAVHEALRAGDSYQINYTYRLNFDMFGT PTALYRRLRARQPVRYGALIALPCGAWVVSCSPELFVEKHGDVLRARPMKGTAPRSADPRDDAAAAAFLANDPKNRAENV MIVDLLRNDVSRIARTGTVKVPALFSVEPYASVWQMTSTVEAGWRDGTTFAQMLRALFPCGSITGAPKHKTMELIDAIES TPRGLYTGAIGWLDARKEDQSTGDAGPGGMAGCGDFCLSVAIRTLTLDAVGIDAIATVGARDAAARRAGRRRGTMGVGAG IVLDSVAADEYAECELKARFLTDADPGFQLFETMAATRADGVRHLERHLARLQGSADAFGFRLDADALRREVDARCAALD GDGPYRMKLALAKDAAVEITAAPLKPLPAGPVGVMLASEHGFAPTRTDDALLLHKTTRRAEYDRAWQAAEALGGFDMLFV NERGEVTEGGRSNLFVKLDGQWVTPPLASGVLPGVMRGVLLDDRAFGAVERIVTRDDLARAQALLLTNALRGALDAVLT
Sequences:
>Translated_639_residues MTEGNESASFALLDDCDSTAVARSSRLYSGFVRERVCTDPARLDEVDAAVAQDLRDGLHAVVVGDYEFGRNLERAQPGHA PLRFLLYARCERLSRDEVDAWLAQQDGGGAPSIAGVAHVAKSVSRDVFDAAIAAVHEALRAGDSYQINYTYRLNFDMFGT PTALYRRLRARQPVRYGALIALPCGAWVVSCSPELFVEKHGDVLRARPMKGTAPRSADPRDDAAAAAFLANDPKNRAENV MIVDLLRNDVSRIARTGTVKVPALFSVEPYASVWQMTSTVEAGWRDGTTFAQMLRALFPCGSITGAPKHKTMELIDAIES TPRGLYTGAIGWLDARKEDQSTGDAGPGGMAGCGDFCLSVAIRTLTLDAVGIDAIATVGARDAAARRAGRRRGTMGVGAG IVLDSVAADEYAECELKARFLTDADPGFQLFETMAATRADGVRHLERHLARLQGSADAFGFRLDADALRREVDARCAALD GDGPYRMKLALAKDAAVEITAAPLKPLPAGPVGVMLASEHGFAPTRTDDALLLHKTTRRAEYDRAWQAAEALGGFDMLFV NERGEVTEGGRSNLFVKLDGQWVTPPLASGVLPGVMRGVLLDDRAFGAVERIVTRDDLARAQALLLTNALRGALDAVLT >Mature_638_residues TEGNESASFALLDDCDSTAVARSSRLYSGFVRERVCTDPARLDEVDAAVAQDLRDGLHAVVVGDYEFGRNLERAQPGHAP LRFLLYARCERLSRDEVDAWLAQQDGGGAPSIAGVAHVAKSVSRDVFDAAIAAVHEALRAGDSYQINYTYRLNFDMFGTP TALYRRLRARQPVRYGALIALPCGAWVVSCSPELFVEKHGDVLRARPMKGTAPRSADPRDDAAAAAFLANDPKNRAENVM IVDLLRNDVSRIARTGTVKVPALFSVEPYASVWQMTSTVEAGWRDGTTFAQMLRALFPCGSITGAPKHKTMELIDAIEST PRGLYTGAIGWLDARKEDQSTGDAGPGGMAGCGDFCLSVAIRTLTLDAVGIDAIATVGARDAAARRAGRRRGTMGVGAGI VLDSVAADEYAECELKARFLTDADPGFQLFETMAATRADGVRHLERHLARLQGSADAFGFRLDADALRREVDARCAALDG DGPYRMKLALAKDAAVEITAAPLKPLPAGPVGVMLASEHGFAPTRTDDALLLHKTTRRAEYDRAWQAAEALGGFDMLFVN ERGEVTEGGRSNLFVKLDGQWVTPPLASGVLPGVMRGVLLDDRAFGAVERIVTRDDLARAQALLLTNALRGALDAVLT
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=324, Percent_Identity=35.1851851851852, Blast_Score=178, Evalue=1e-45, Organism=Escherichia coli, GI1787518, Length=330, Percent_Identity=28.7878787878788, Blast_Score=93, Evalue=7e-20, Organism=Escherichia coli, GI1786809, Length=172, Percent_Identity=26.1627906976744, Blast_Score=67, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6320935, Length=306, Percent_Identity=30.3921568627451, Blast_Score=114, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6324361, Length=235, Percent_Identity=29.7872340425532, Blast_Score=92, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 - InterPro: IPR005802 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 68620; Mature: 68489
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEGNESASFALLDDCDSTAVARSSRLYSGFVRERVCTDPARLDEVDAAVAQDLRDGLHA CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEE VVVGDYEFGRNLERAQPGHAPLRFLLYARCERLSRDEVDAWLAQQDGGGAPSIAGVAHVA EEEECHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHH KSVSRDVFDAAIAAVHEALRAGDSYQINYTYRLNFDMFGTPTALYRRLRARQPVRYGALI HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEE ALPCGAWVVSCSPELFVEKHGDVLRARPMKGTAPRSADPRDDAAAAAFLANDPKNRAENV EEECCCEEEECCHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHCCE MIVDLLRNDVSRIARTGTVKVPALFSVEPYASVWQMTSTVEAGWRDGTTFAQMLRALFPC EEHHHHHHHHHHHHHCCCEECCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC GSITGAPKHKTMELIDAIESTPRGLYTGAIGWLDARKEDQSTGDAGPGGMAGCGDFCLSV CCCCCCCCHHHHHHHHHHHCCCCCEECCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH AIRTLTLDAVGIDAIATVGARDAAARRAGRRRGTMGVGAGIVLDSVAADEYAECELKARF HHHHHEEHHHCHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHEEEEEE LTDADPGFQLFETMAATRADGVRHLERHLARLQGSADAFGFRLDADALRREVDARCAALD ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHEEEC GDGPYRMKLALAKDAAVEITAAPLKPLPAGPVGVMLASEHGFAPTRTDDALLLHKTTRRA CCCCEEEEEEEECCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEHHHHHH EYDRAWQAAEALGGFDMLFVNERGEVTEGGRSNLFVKLDGQWVTPPLASGVLPGVMRGVL HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEECCEECCCHHHHHHHHHHHHHHH LDDRAFGAVERIVTRDDLARAQALLLTNALRGALDAVLT HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TEGNESASFALLDDCDSTAVARSSRLYSGFVRERVCTDPARLDEVDAAVAQDLRDGLHA CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEE VVVGDYEFGRNLERAQPGHAPLRFLLYARCERLSRDEVDAWLAQQDGGGAPSIAGVAHVA EEEECHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHH KSVSRDVFDAAIAAVHEALRAGDSYQINYTYRLNFDMFGTPTALYRRLRARQPVRYGALI HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEE ALPCGAWVVSCSPELFVEKHGDVLRARPMKGTAPRSADPRDDAAAAAFLANDPKNRAENV EEECCCEEEECCHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHCCE MIVDLLRNDVSRIARTGTVKVPALFSVEPYASVWQMTSTVEAGWRDGTTFAQMLRALFPC EEHHHHHHHHHHHHHCCCEECCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC GSITGAPKHKTMELIDAIESTPRGLYTGAIGWLDARKEDQSTGDAGPGGMAGCGDFCLSV CCCCCCCCHHHHHHHHHHHCCCCCEECCCHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH AIRTLTLDAVGIDAIATVGARDAAARRAGRRRGTMGVGAGIVLDSVAADEYAECELKARF HHHHHEEHHHCHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHEEEEEE LTDADPGFQLFETMAATRADGVRHLERHLARLQGSADAFGFRLDADALRREVDARCAALD ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHEEEC GDGPYRMKLALAKDAAVEITAAPLKPLPAGPVGVMLASEHGFAPTRTDDALLLHKTTRRA CCCCEEEEEEEECCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEEHHHHHH EYDRAWQAAEALGGFDMLFVNERGEVTEGGRSNLFVKLDGQWVTPPLASGVLPGVMRGVL HHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEEECCEECCCHHHHHHHHHHHHHHH LDDRAFGAVERIVTRDDLARAQALLLTNALRGALDAVLT HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3057324; 2251281 [H]