| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is 115350699
Identifier: 115350699
GI number: 115350699
Start: 725577
End: 726017
Strand: Direct
Name: 115350699
Synonym: Bamb_0645
Alternate gene names: NA
Gene position: 725577-726017 (Clockwise)
Preceding gene: 115350698
Following gene: 115350700
Centisome position: 20.4
GC content: 70.98
Gene sequence:
>441_bases ATGATTCCCGCCGGCGTCGATCCGGCCGCGTTCAACGCGTTCGACATGCAGGCGCTGGCGCCCGACACGTTCGACGCCGG TGTCGCCGGCGCCGGCGACGCGCTCGCCGTGGTGTTCTTCTGGGGCGTCGACTGCTTCAATTGCGAGATCGCGAAGAAGG CGATGCTCGCCCAGCCGGACCCGATCCGTGCGCTGGGCCTGAAGTGGTTCCACTGCAACGTGTACGAATACCCAGAGCTT GGGCGCCGCTTCGGCCTGCACGGCGTGCCGACGTGGTTCTTCTTCCACCGCGGCAAGCGGCTCGGCCGCGCGACCGGCTG GCATGGCCTCGCACAGTTCCAGGCGGCGGTGTCGGCGGCGCGCGCGAAGTTCGCCGCGGCCGGCGCGCAGCCCGCGGAGC CCGACGGCGGCCTGCACGATCCAGCTACCGGCGGCGATTGA
Upstream 100 bases:
>100_bases AACACCGTCGTGACGGTTCTGCAAAAGGGCTACATGATCGCCGACCGCGTGCTGCGCCCGGCGCTCGTCACGGTCGCCCA GCCGAAGTAAGGCTGCCGCG
Downstream 100 bases:
>100_bases AAAAATTTAATATCCGCATCGCTGGGCGGGTCTTGAAAACGGGCCGGCCGGACGCATTTCGGGAACAGAGTTGAATTCAG GCGCGCGAAACCGCCCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Thioredoxin; Thioredoxin Family Protein; Thiol-Disulfide Isomerase And Thioredoxin; Thioredoxin Family
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MIPAGVDPAAFNAFDMQALAPDTFDAGVAGAGDALAVVFFWGVDCFNCEIAKKAMLAQPDPIRALGLKWFHCNVYEYPEL GRRFGLHGVPTWFFFHRGKRLGRATGWHGLAQFQAAVSAARAKFAAAGAQPAEPDGGLHDPATGGD
Sequences:
>Translated_146_residues MIPAGVDPAAFNAFDMQALAPDTFDAGVAGAGDALAVVFFWGVDCFNCEIAKKAMLAQPDPIRALGLKWFHCNVYEYPEL GRRFGLHGVPTWFFFHRGKRLGRATGWHGLAQFQAAVSAARAKFAAAGAQPAEPDGGLHDPATGGD >Mature_146_residues MIPAGVDPAAFNAFDMQALAPDTFDAGVAGAGDALAVVFFWGVDCFNCEIAKKAMLAQPDPIRALGLKWFHCNVYEYPEL GRRFGLHGVPTWFFFHRGKRLGRATGWHGLAQFQAAVSAARAKFAAAGAQPAEPDGGLHDPATGGD
Specific function: Unknown
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15520; Mature: 15520
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPAGVDPAAFNAFDMQALAPDTFDAGVAGAGDALAVVFFWGVDCFNCEIAKKAMLAQPD CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHEEHHHHCCCCCCHHHHHHHHHCCCC PIRALGLKWFHCNVYEYPELGRRFGLHGVPTWFFFHRGKRLGRATGWHGLAQFQAAVSAA CCHHHCEEEEECCCCCCHHHHHHCCCCCCCHHHHHHHCCHHCCCCCCHHHHHHHHHHHHH RAKFAAAGAQPAEPDGGLHDPATGGD HHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIPAGVDPAAFNAFDMQALAPDTFDAGVAGAGDALAVVFFWGVDCFNCEIAKKAMLAQPD CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCHHEEHHHHCCCCCCHHHHHHHHHCCCC PIRALGLKWFHCNVYEYPELGRRFGLHGVPTWFFFHRGKRLGRATGWHGLAQFQAAVSAA CCHHHCEEEEECCCCCCHHHHHHCCCCCCCHHHHHHHCCHHCCCCCCHHHHHHHHHHHHH RAKFAAAGAQPAEPDGGLHDPATGGD HHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA