| Definition | Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008390 |
| Length | 3,556,545 |
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The map label for this gene is katG1 [H]
Identifier: 115350670
GI number: 115350670
Start: 690886
End: 693072
Strand: Direct
Name: katG1 [H]
Synonym: Bamb_0616
Alternate gene names: 115350670
Gene position: 690886-693072 (Clockwise)
Preceding gene: 115350669
Following gene: 115350671
Centisome position: 19.43
GC content: 67.99
Gene sequence:
>2187_bases ATGTCGACCGAAGCGAAATGTCCGTTCAACCACACGGCGGCCGGCGGCACGTCGAACAAGGACTGGTGGCCGAACCAGCT GAACCTGAACATCCTGCACCGGCACTCGGCGCTGTCCGATCCGATGGACAAGGATTTCGACTACGCACAAGCATTCAAGA AGCTGGACCTCGCGGCGGTGAAGCGCGACCTGCAGGCGCTGATGACGACGTCGCAGGACTGGTGGCCGGCAGACTTCGGC CACTACGGCGGCCTGTTCGTCCGGATGGCCTGGCACAGCGCCGGCACGTACCGGATCGCCGACGGCCGCGGCGGCGCGGG CGGCGGGCAGCAGCGCTTCGCGCCGCTGAACAGCTGGCCGGACAACGCGAACCTCGACAAGGCGCGCCGGCTGCTGTGGC CGATCAAGCAGAAGTACGGCCGCAACATCTCGTGGGCCGACCTGCTGATCCTGACCGGCAACGTCGCGCTCGAATCGATG GGCTTCAAGACCTTCGGCTACGCGGGCGGCCGTGCCGACACGTGGGAACCGGACGACGTCTACTGGGGTTCGGAAAAGAT CTGGCTGGAACTCAGCGGCGGCCCGAACAGCCGCTACTCGGGCGACCGTGATCTCGAGAACCCGCTCGCGGCCGTGCAGA TGGGCCTCATCTACGTGAACCCGGAAGGCCCGGACGGCAACCCCGACCCGGTCGCGGCGGCACGCGACATCCGCGACACG TTCGCGCGGATGGCGATGAACGACGAAGAGACGGTCGCGCTGATCGCCGGCGGCCACACGTTCGGCAAGACGCACGGCGC GGGCCCCGCGACGGACGTCGGTCCGGAGCCGGAAGCGGCGGGCATCGAGCTGCAGGGTCTCGGCTGGAAGAGCGCGTACG CATCGGGCAAGGGCCACGATGCGATCACCAGCGGCCTCGAAGTCACGTGGACGTCGACGCCGACGAAGTGGAGCCACGAC TTCTTCAAGCACCTGTTCAGCTACGAATGGGAACTGACGAAGAGCCCGGCCGGCGCGCACCAGTGGGTCGCGAAGGGCGC GGACGAAGTGATTCCGGATGCGTTCGACGCGTCGAAGAAGCATCGCCCGACGATGCTGACGACCGACCTGTCGCTGCGTT TCGATCCGGCCTACGAGAAGATCTCGCGCCGCTTCTACGAGAACCCGGCCGAGTTTGCCGACGCGTTCGCGCGCGCCTGG TTCAAGCTCACGCACCGCGACATGGGTCCGCGTGCGCGCTATCTCGGCCCGGAAGTGCCGGCCGAGGAACTGCTGTGGCA GGACCCGATCCCGGCCGTCGATCACCCGCTGATCGATGATGCGGACGTCGCGGCGCTGAAGGCGAAGGTGCTCGCGTCGG GCCTGTCGGTCGCGCAGCTCGTGTCGACCGCGTGGGCGTCGGCCTCGACGTTCCGGGGTTCCGACAAGCGCGGCGGAGCG AACGGCGCGCGCATCCGCCTGGCGCCGCAGAAGGACTGGGAAGTGAACCAGCCGGCCGCGCTCGCCGCAGTGCTCGAGAC GCTCGAAGGCGTGCGCAAGGCGTTCAACGATGCGCAGACGGGCGGCAAGAAGGTGTCGCTCGCCGATCTGATCGTGCTGG CCGGTGCGGCCGGCGTCGAACAGGCCGCGAAGAGCGCCGGTGTCGCGGTGACGGTGCCGTTCGCACCGGGCCGGATGGAC GCTTCGCAGGAGCAGACGGACGTCGACGCGATGGCCGTGCTCGAGCCGGTGGCGGACGGTTTCCGCAACTACCTGAAGAG CGCGTACAAGACGCCGGCCGAGGCGCTGCTGGTCGACAAGGCCCAGCTGCTGACGCTGAACGGGCCGGAGCTGACGGTGC TCGTCGGTGGCCTGCGCGTGCTCGGCGCGAACGTCGGCGATGCGAAGCACGGCGTGTTCACCGATCGTCCGGGCACGCTG TCGAACGACTTCTTCGTGAACCTGCTCGACATGGGCACGGAGTGGAAGCCGGTGTCGGCCGCGAACGACGTGTTCGAAGG GCGCGATCGTGCGACGGGCCAGGTCAAGTGGACCGGCACGCGCGTCGACCTGATCTTCGGTTCGCACTCGCAGTTGCGCG CGCTGGCCGAGGTGTACGGCAGCGCGGACGCGAACGAGAAGTTCGTGCGCGATTTCGTCGCGGCCTGGAACAAGGTGATG AACCTCGACCGTTTCGACCTCGCGTGA
Upstream 100 bases:
>100_bases CACGCCGCTCCGGTGCCCCAGATTCCCGTTTCATCCCCCGCAATGCTCCACGAACCGCGCCCGGCAAGTGGGGGCTTACG AGCAAATAAAGGAGAAAAGC
Downstream 100 bases:
>100_bases ACGTCGTGACGCGCTAGCGCAGTCACGTTGCAACGTGCAGCGGCCGGTCGCACGACCGGCCGTTTTTTCTTCCGATTCAA GGTCTTGTCGAAGGAGTGAC
Product: catalase/peroxidase HPI
Products: NA
Alternate protein names: CP 1; Peroxidase/catalase 1 [H]
Number of amino acids: Translated: 728; Mature: 727
Protein sequence:
>728_residues MSTEAKCPFNHTAAGGTSNKDWWPNQLNLNILHRHSALSDPMDKDFDYAQAFKKLDLAAVKRDLQALMTTSQDWWPADFG HYGGLFVRMAWHSAGTYRIADGRGGAGGGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGRNISWADLLILTGNVALESM GFKTFGYAGGRADTWEPDDVYWGSEKIWLELSGGPNSRYSGDRDLENPLAAVQMGLIYVNPEGPDGNPDPVAAARDIRDT FARMAMNDEETVALIAGGHTFGKTHGAGPATDVGPEPEAAGIELQGLGWKSAYASGKGHDAITSGLEVTWTSTPTKWSHD FFKHLFSYEWELTKSPAGAHQWVAKGADEVIPDAFDASKKHRPTMLTTDLSLRFDPAYEKISRRFYENPAEFADAFARAW FKLTHRDMGPRARYLGPEVPAEELLWQDPIPAVDHPLIDDADVAALKAKVLASGLSVAQLVSTAWASASTFRGSDKRGGA NGARIRLAPQKDWEVNQPAALAAVLETLEGVRKAFNDAQTGGKKVSLADLIVLAGAAGVEQAAKSAGVAVTVPFAPGRMD ASQEQTDVDAMAVLEPVADGFRNYLKSAYKTPAEALLVDKAQLLTLNGPELTVLVGGLRVLGANVGDAKHGVFTDRPGTL SNDFFVNLLDMGTEWKPVSAANDVFEGRDRATGQVKWTGTRVDLIFGSHSQLRALAEVYGSADANEKFVRDFVAAWNKVM NLDRFDLA
Sequences:
>Translated_728_residues MSTEAKCPFNHTAAGGTSNKDWWPNQLNLNILHRHSALSDPMDKDFDYAQAFKKLDLAAVKRDLQALMTTSQDWWPADFG HYGGLFVRMAWHSAGTYRIADGRGGAGGGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGRNISWADLLILTGNVALESM GFKTFGYAGGRADTWEPDDVYWGSEKIWLELSGGPNSRYSGDRDLENPLAAVQMGLIYVNPEGPDGNPDPVAAARDIRDT FARMAMNDEETVALIAGGHTFGKTHGAGPATDVGPEPEAAGIELQGLGWKSAYASGKGHDAITSGLEVTWTSTPTKWSHD FFKHLFSYEWELTKSPAGAHQWVAKGADEVIPDAFDASKKHRPTMLTTDLSLRFDPAYEKISRRFYENPAEFADAFARAW FKLTHRDMGPRARYLGPEVPAEELLWQDPIPAVDHPLIDDADVAALKAKVLASGLSVAQLVSTAWASASTFRGSDKRGGA NGARIRLAPQKDWEVNQPAALAAVLETLEGVRKAFNDAQTGGKKVSLADLIVLAGAAGVEQAAKSAGVAVTVPFAPGRMD ASQEQTDVDAMAVLEPVADGFRNYLKSAYKTPAEALLVDKAQLLTLNGPELTVLVGGLRVLGANVGDAKHGVFTDRPGTL SNDFFVNLLDMGTEWKPVSAANDVFEGRDRATGQVKWTGTRVDLIFGSHSQLRALAEVYGSADANEKFVRDFVAAWNKVM NLDRFDLA >Mature_727_residues STEAKCPFNHTAAGGTSNKDWWPNQLNLNILHRHSALSDPMDKDFDYAQAFKKLDLAAVKRDLQALMTTSQDWWPADFGH YGGLFVRMAWHSAGTYRIADGRGGAGGGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGRNISWADLLILTGNVALESMG FKTFGYAGGRADTWEPDDVYWGSEKIWLELSGGPNSRYSGDRDLENPLAAVQMGLIYVNPEGPDGNPDPVAAARDIRDTF ARMAMNDEETVALIAGGHTFGKTHGAGPATDVGPEPEAAGIELQGLGWKSAYASGKGHDAITSGLEVTWTSTPTKWSHDF FKHLFSYEWELTKSPAGAHQWVAKGADEVIPDAFDASKKHRPTMLTTDLSLRFDPAYEKISRRFYENPAEFADAFARAWF KLTHRDMGPRARYLGPEVPAEELLWQDPIPAVDHPLIDDADVAALKAKVLASGLSVAQLVSTAWASASTFRGSDKRGGAN GARIRLAPQKDWEVNQPAALAAVLETLEGVRKAFNDAQTGGKKVSLADLIVLAGAAGVEQAAKSAGVAVTVPFAPGRMDA SQEQTDVDAMAVLEPVADGFRNYLKSAYKTPAEALLVDKAQLLTLNGPELTVLVGGLRVLGANVGDAKHGVFTDRPGTLS NDFFVNLLDMGTEWKPVSAANDVFEGRDRATGQVKWTGTRVDLIFGSHSQLRALAEVYGSADANEKFVRDFVAAWNKVMN LDRFDLA
Specific function: Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity [H]
COG id: COG0376
COG function: function code P; Catalase (peroxidase I)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peroxidase family. Peroxidase/catalase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790378, Length=730, Percent_Identity=63.4246575342466, Blast_Score=909, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000763 - InterPro: IPR010255 - InterPro: IPR002016 - InterPro: IPR019794 - InterPro: IPR019793 [H]
Pfam domain/function: PF00141 peroxidase [H]
EC number: =1.11.1.6; =1.11.1.7 [H]
Molecular weight: Translated: 79133; Mature: 79002
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: PS00435 PEROXIDASE_1 ; PS00436 PEROXIDASE_2 ; PS50873 PEROXIDASE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTEAKCPFNHTAAGGTSNKDWWPNQLNLNILHRHSALSDPMDKDFDYAQAFKKLDLAAV CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHCCCCCCCCCHHHHHHHHHHHHHH KRDLQALMTTSQDWWPADFGHYGGLFVRMAWHSAGTYRIADGRGGAGGGQQRFAPLNSWP HHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCC DNANLDKARRLLWPIKQKYGRNISWADLLILTGNVALESMGFKTFGYAGGRADTWEPDDV CCCCHHHHHHHHHHHHHHHCCCCCHHEEEEEECCHHHHHCCCCEECCCCCCCCCCCCCCE YWGSEKIWLELSGGPNSRYSGDRDLENPLAAVQMGLIYVNPEGPDGNPDPVAAARDIRDT EECCCEEEEEECCCCCCCCCCCCCHHHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHH FARMAMNDEETVALIAGGHTFGKTHGAGPATDVGPEPEAAGIELQGLGWKSAYASGKGHD HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCH AITSGLEVTWTSTPTKWSHDFFKHLFSYEWELTKSPAGAHQWVAKGADEVIPDAFDASKK HHHCCCEEEECCCCCCCCHHHHHHHHHCCEEECCCCCCHHHHHHCCHHHHCCCHHCCCCC HRPTMLTTDLSLRFDPAYEKISRRFYENPAEFADAFARAWFKLTHRDMGPRARYLGPEVP CCCEEEEEEEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCC AEELLWQDPIPAVDHPLIDDADVAALKAKVLASGLSVAQLVSTAWASASTFRGSDKRGGA HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCHHCCCCCCCCCC NGARIRLAPQKDWEVNQPAALAAVLETLEGVRKAFNDAQTGGKKVSLADLIVLAGAAGVE CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCHH QAAKSAGVAVTVPFAPGRMDASQEQTDVDAMAVLEPVADGFRNYLKSAYKTPAEALLVDK HHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEECC AQLLTLNGPELTVLVGGLRVLGANVGDAKHGVFTDRPGTLSNDFFVNLLDMGTEWKPVSA EEEEEECCCEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCCH ANDVFEGRDRATGQVKWTGTRVDLIFGSHSQLRALAEVYGSADANEKFVRDFVAAWNKVM HHHHHCCCCCCCCEEEEECEEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH NLDRFDLA CCCHHCCC >Mature Secondary Structure STEAKCPFNHTAAGGTSNKDWWPNQLNLNILHRHSALSDPMDKDFDYAQAFKKLDLAAV CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCHHCCCCCCCCCHHHHHHHHHHHHHH KRDLQALMTTSQDWWPADFGHYGGLFVRMAWHSAGTYRIADGRGGAGGGQQRFAPLNSWP HHHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCC DNANLDKARRLLWPIKQKYGRNISWADLLILTGNVALESMGFKTFGYAGGRADTWEPDDV CCCCHHHHHHHHHHHHHHHCCCCCHHEEEEEECCHHHHHCCCCEECCCCCCCCCCCCCCE YWGSEKIWLELSGGPNSRYSGDRDLENPLAAVQMGLIYVNPEGPDGNPDPVAAARDIRDT EECCCEEEEEECCCCCCCCCCCCCHHHHHHHHEEEEEEECCCCCCCCCCCHHHHHHHHHH FARMAMNDEETVALIAGGHTFGKTHGAGPATDVGPEPEAAGIELQGLGWKSAYASGKGHD HHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCH AITSGLEVTWTSTPTKWSHDFFKHLFSYEWELTKSPAGAHQWVAKGADEVIPDAFDASKK HHHCCCEEEECCCCCCCCHHHHHHHHHCCEEECCCCCCHHHHHHCCHHHHCCCHHCCCCC HRPTMLTTDLSLRFDPAYEKISRRFYENPAEFADAFARAWFKLTHRDMGPRARYLGPEVP CCCEEEEEEEEEEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCC AEELLWQDPIPAVDHPLIDDADVAALKAKVLASGLSVAQLVSTAWASASTFRGSDKRGGA HHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHCCHHCCCCCCCCCC NGARIRLAPQKDWEVNQPAALAAVLETLEGVRKAFNDAQTGGKKVSLADLIVLAGAAGVE CCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCCCCHH QAAKSAGVAVTVPFAPGRMDASQEQTDVDAMAVLEPVADGFRNYLKSAYKTPAEALLVDK HHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEECC AQLLTLNGPELTVLVGGLRVLGANVGDAKHGVFTDRPGTLSNDFFVNLLDMGTEWKPVSA EEEEEECCCEEEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHCCCCCCCCCH ANDVFEGRDRATGQVKWTGTRVDLIFGSHSQLRALAEVYGSADANEKFVRDFVAAWNKVM HHHHHCCCCCCCCEEEEECEEEEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH NLDRFDLA CCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA