Definition Burkholderia ambifaria AMMD chromosome chromosome 1, complete sequence.
Accession NC_008390
Length 3,556,545

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The map label for this gene is gpmB [H]

Identifier: 115350633

GI number: 115350633

Start: 651155

End: 651817

Strand: Direct

Name: gpmB [H]

Synonym: Bamb_0579

Alternate gene names: 115350633

Gene position: 651155-651817 (Clockwise)

Preceding gene: 115350632

Following gene: 115350643

Centisome position: 18.31

GC content: 66.97

Gene sequence:

>663_bases
ATGGCCACCACGCAGATTCTGTTCATTCGCCATGGCGAAACGGCCTGGAACCGCATCAAGCGCATCCAGGGCCATATCGA
CATTCCGCTGGCCGAAACGGGGCTCGCGCAGGCGCGGCGGCTGGCCGTCCGGCTCGCGCGGGAAGCGCGCGAAGGGCAGC
GGATCGACGCGATCTATTCGAGCGACCTGATGCGCGCGCAGCAGACCGCGCAACCCTTTGCCGATGCGCTCGGGCTGTCG
CTGCAGTTGCGCGAAGGGCTGCGGGAACGCGCGTACGGCGTGTTCCAGGGGCATGACAGCACCGAGATCGAGACGCTGTT
TCCGGACGCCTACGCCGCGTGGCAGACCCGCGACCCAGGCTTCGCGCCCGACGGCGGCGAGTCGCAGAGGGAGTTCTATC
ACCGTGTGCTGCATGCGCTCGAGCCGATCGTCGCGGCGCATCCGGGCGGCCGGATCGCTTGCGTCGCGCACGGCGGCGTA
CTCGACTGCGTGTACCGCTTTGCAAACGGTCTCGAGTTGTCGGCACCGCGCAGCTATCAACTGCTCAACACGAGCATCAA
CGTCGTCGATTACGTCGATGGCCGCGCGCAGGTCGTGCAATGGGCCGACGTGTCGCATCTGGACGCCGCGAGCGACGACG
ACGGGTATCGCAAGGTGCTCTGA

Upstream 100 bases:

>100_bases
GCGAGTTCGGCGCCGACATGCAGGTGTCGCTCGTCAACGACGGCCCCGTGACGTTCTGGCTGCAAGTGCGGCCCTGACAC
TTTCCCGGAGACGCGCCGCG

Downstream 100 bases:

>100_bases
TCAGGTCGTATCGCCCCGGCCTGACCTGGCCTGATGGGCCGGGGGCGCTTCGTACGAGCGTGCGCTAGGGCAAGCGCGTC
AGCTTGTCACCCGTATTTCC

Product: phosphoglycerate mutase

Products: NA

Alternate protein names: PGAM; Phosphoglyceromutase [H]

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MATTQILFIRHGETAWNRIKRIQGHIDIPLAETGLAQARRLAVRLAREAREGQRIDAIYSSDLMRAQQTAQPFADALGLS
LQLREGLRERAYGVFQGHDSTEIETLFPDAYAAWQTRDPGFAPDGGESQREFYHRVLHALEPIVAAHPGGRIACVAHGGV
LDCVYRFANGLELSAPRSYQLLNTSINVVDYVDGRAQVVQWADVSHLDAASDDDGYRKVL

Sequences:

>Translated_220_residues
MATTQILFIRHGETAWNRIKRIQGHIDIPLAETGLAQARRLAVRLAREAREGQRIDAIYSSDLMRAQQTAQPFADALGLS
LQLREGLRERAYGVFQGHDSTEIETLFPDAYAAWQTRDPGFAPDGGESQREFYHRVLHALEPIVAAHPGGRIACVAHGGV
LDCVYRFANGLELSAPRSYQLLNTSINVVDYVDGRAQVVQWADVSHLDAASDDDGYRKVL
>Mature_219_residues
ATTQILFIRHGETAWNRIKRIQGHIDIPLAETGLAQARRLAVRLAREAREGQRIDAIYSSDLMRAQQTAQPFADALGLSL
QLREGLRERAYGVFQGHDSTEIETLFPDAYAAWQTRDPGFAPDGGESQREFYHRVLHALEPIVAAHPGGRIACVAHGGVL
DCVYRFANGLELSAPRSYQLLNTSINVVDYVDGRAQVVQWADVSHLDAASDDDGYRKVL

Specific function: Unknown

COG id: COG0406

COG function: function code G; Fructose-2,6-bisphosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790856, Length=222, Percent_Identity=36.036036036036, Blast_Score=97, Evalue=6e-22,
Organism=Escherichia coli, GI1786970, Length=112, Percent_Identity=35.7142857142857, Blast_Score=64, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6324857, Length=203, Percent_Identity=30.0492610837438, Blast_Score=73, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013078
- InterPro:   IPR001345
- InterPro:   IPR023086 [H]

Pfam domain/function: PF00300 PGAM [H]

EC number: =5.4.2.1 [H]

Molecular weight: Translated: 24424; Mature: 24292

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATTQILFIRHGETAWNRIKRIQGHIDIPLAETGLAQARRLAVRLAREAREGQRIDAIYS
CCCEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SDLMRAQQTAQPFADALGLSLQLREGLRERAYGVFQGHDSTEIETLFPDAYAAWQTRDPG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCEEECCCCCCCCEEECCCHHHHCCCCCCC
FAPDGGESQREFYHRVLHALEPIVAAHPGGRIACVAHGGVLDCVYRFANGLELSAPRSYQ
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCEE
LLNTSINVVDYVDGRAQVVQWADVSHLDAASDDDGYRKVL
EECCCCEEEEECCCHHHEEEECCCCCCCCCCCCCCHHCCC
>Mature Secondary Structure 
ATTQILFIRHGETAWNRIKRIQGHIDIPLAETGLAQARRLAVRLAREAREGQRIDAIYS
CCEEEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
SDLMRAQQTAQPFADALGLSLQLREGLRERAYGVFQGHDSTEIETLFPDAYAAWQTRDPG
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCEEECCCCCCCCEEECCCHHHHCCCCCCC
FAPDGGESQREFYHRVLHALEPIVAAHPGGRIACVAHGGVLDCVYRFANGLELSAPRSYQ
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCEE
LLNTSINVVDYVDGRAQVVQWADVSHLDAASDDDGYRKVL
EECCCCEEEEECCCHHHEEEECCCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA