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The map label for this gene is ybfB [H]

Identifier: 115350478

GI number: 115350478

Start: 473964

End: 475226

Strand: Direct

Name: ybfB [H]

Synonym: Bamb_0424

Alternate gene names: 115350478

Gene position: 473964-475226 (Clockwise)

Preceding gene: 115350474

Following gene: 115350479

Centisome position: 13.33

GC content: 71.89

Gene sequence:

>1263_bases
ATGAGCGGCCCGCGCGCATCGCGCGTCTTCTACGGCTGGTATGTGGTGGCGGCCGCGTTCGCCGTCACGTTCGTCGGCTT
CGGCAGTGCGTACACGTTCAGCGCGTTCGTCGAATCGCTGCAGCGGGATTTCGCCGCGTCGCGCGGGCAGATCTCGCTCG
TGTTCTCGCTGGCCGGCTTCCTCTATTTCGGCTTCGGCATCGTCAGCGGCCCGCTTGCCGATCGCTTCGGCTCCCGACGG
CTCGCCGTCGCCGGCATGTTGCTGACGGCCGCCGGTCTCGCCGCAGCCGGTGCCGCGCATACGCTGCTGCAGGTCTATGT
CGCGTACGGGCTGGGTGTCGGCTTCGGCGTCGGCTGCGCGTATGTGCCGGCCGTCGGTGCCGTGCAACGCTGGTTCGTGC
GGCGGCGCGGCTTCGCGTCGGGGCTCGCGGTCGCAGGGATCGGCGTCGGCACGCTGGTGATGCCGCCGCTCGCGTCCGCG
CTGATCGCGCACGTCGGCTGGCGAGGCGCGTATGTCACGTTGGCGGCGATCGCGGTGGTGGTGGGCGCGGGCATGTCGCT
GCTGATCGAGAACGACCCGCGCGGGCGCGGCTTGCTGCCCGACGGCGATGTGGCGCGTAAGCAAGCGGGCGATGCGCTGC
CCGGTGCCGCGTCAGCGGTGCCGGCCGGTGCGACCGTGCGCGAGGCCGTCGCGTCGCGGCCGTTCGCGAGCCTCTACGCG
GCGTGTCTCGTGTGCTCGTTCGGCGTCTTCGTGCCGTTCGTGCACCTCGTGCCGTACGCGCTCGATCATGGCGTCGCGCC
GTCGACGGCCGTGCTGCTGCTCGGCGCGATCGGCGTCGGCAGCACGGCAGGACGGTTCTTCCTCGGCGGCCTCGCCGATC
GCTTCGGCCGCCGCGCGTCGCTGCTCGCGATGTTCGCGGGCATGGCCGTCGCGCTCGTTGCATGGGCCGGTGCCGGGAGC
GTCGCGACGCTCGCCGCGTTCGCACTCGTGTTCGGCGTGTTCTACGGCGGCTGGGTCGCCGTGCTGCCCGCCGTCGTAAT
GGACTACTTCGGCGGCCGCAACGTGAGCGCGATCATAGGCGTGCTGTACACGAGCGTTGCGTTCGGCACGCTGATCGGGC
CCGCCGCGGCCGGTTTCATCTATGACGCGGGCGGCGGTTATCTCGTGCCGATCCTGGCCAGCGCGGCCGCCAATGCGATC
GCGTTCGCGATCGTCGCCACCACTGGGCGCGCGCCGCTGATGGCGCGCGCGGCCGGCCGCTAG

Upstream 100 bases:

>100_bases
CCGACTTGCGGCGATCGAGGCGATCAACATAGTTCAACTATATCCATCAGGCAATCCGGGCGCCGCGCGGCGTCCGGCGG
AACCCGGGAGGAGCATCGTC

Downstream 100 bases:

>100_bases
GCACACGTGGCCGGCCGCGCGGCCACGCGCTTGCGGCTAGGCGTCATCCACGATTTCCGCTACGGTGTGCGGGGCGTCGA
TCATCGACGGACGGAGGCGC

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MSGPRASRVFYGWYVVAAAFAVTFVGFGSAYTFSAFVESLQRDFAASRGQISLVFSLAGFLYFGFGIVSGPLADRFGSRR
LAVAGMLLTAAGLAAAGAAHTLLQVYVAYGLGVGFGVGCAYVPAVGAVQRWFVRRRGFASGLAVAGIGVGTLVMPPLASA
LIAHVGWRGAYVTLAAIAVVVGAGMSLLIENDPRGRGLLPDGDVARKQAGDALPGAASAVPAGATVREAVASRPFASLYA
ACLVCSFGVFVPFVHLVPYALDHGVAPSTAVLLLGAIGVGSTAGRFFLGGLADRFGRRASLLAMFAGMAVALVAWAGAGS
VATLAAFALVFGVFYGGWVAVLPAVVMDYFGGRNVSAIIGVLYTSVAFGTLIGPAAAGFIYDAGGGYLVPILASAAANAI
AFAIVATTGRAPLMARAAGR

Sequences:

>Translated_420_residues
MSGPRASRVFYGWYVVAAAFAVTFVGFGSAYTFSAFVESLQRDFAASRGQISLVFSLAGFLYFGFGIVSGPLADRFGSRR
LAVAGMLLTAAGLAAAGAAHTLLQVYVAYGLGVGFGVGCAYVPAVGAVQRWFVRRRGFASGLAVAGIGVGTLVMPPLASA
LIAHVGWRGAYVTLAAIAVVVGAGMSLLIENDPRGRGLLPDGDVARKQAGDALPGAASAVPAGATVREAVASRPFASLYA
ACLVCSFGVFVPFVHLVPYALDHGVAPSTAVLLLGAIGVGSTAGRFFLGGLADRFGRRASLLAMFAGMAVALVAWAGAGS
VATLAAFALVFGVFYGGWVAVLPAVVMDYFGGRNVSAIIGVLYTSVAFGTLIGPAAAGFIYDAGGGYLVPILASAAANAI
AFAIVATTGRAPLMARAAGR
>Mature_419_residues
SGPRASRVFYGWYVVAAAFAVTFVGFGSAYTFSAFVESLQRDFAASRGQISLVFSLAGFLYFGFGIVSGPLADRFGSRRL
AVAGMLLTAAGLAAAGAAHTLLQVYVAYGLGVGFGVGCAYVPAVGAVQRWFVRRRGFASGLAVAGIGVGTLVMPPLASAL
IAHVGWRGAYVTLAAIAVVVGAGMSLLIENDPRGRGLLPDGDVARKQAGDALPGAASAVPAGATVREAVASRPFASLYAA
CLVCSFGVFVPFVHLVPYALDHGVAPSTAVLLLGAIGVGSTAGRFFLGGLADRFGRRASLLAMFAGMAVALVAWAGAGSV
ATLAAFALVFGVFYGGWVAVLPAVVMDYFGGRNVSAIIGVLYTSVAFGTLIGPAAAGFIYDAGGGYLVPILASAAANAIA
FAIVATTGRAPLMARAAGR

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Homo sapiens, GI291621700, Length=393, Percent_Identity=26.7175572519084, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI114796626, Length=398, Percent_Identity=31.4070351758794, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI24431958, Length=443, Percent_Identity=26.1851015801354, Blast_Score=119, Evalue=6e-27,
Organism=Homo sapiens, GI42475555, Length=380, Percent_Identity=26.8421052631579, Blast_Score=106, Evalue=3e-23,
Organism=Homo sapiens, GI109288012, Length=394, Percent_Identity=27.9187817258883, Blast_Score=102, Evalue=8e-22,
Organism=Homo sapiens, GI109288010, Length=394, Percent_Identity=27.9187817258883, Blast_Score=102, Evalue=8e-22,
Organism=Homo sapiens, GI4759112, Length=394, Percent_Identity=27.9187817258883, Blast_Score=102, Evalue=8e-22,
Organism=Homo sapiens, GI41327156, Length=465, Percent_Identity=24.3010752688172, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI262073007, Length=379, Percent_Identity=24.802110817942, Blast_Score=92, Evalue=7e-19,
Organism=Homo sapiens, GI115583685, Length=379, Percent_Identity=24.802110817942, Blast_Score=92, Evalue=7e-19,
Organism=Homo sapiens, GI292781289, Length=442, Percent_Identity=22.3981900452489, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI40789261, Length=442, Percent_Identity=22.3981900452489, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI4759116, Length=391, Percent_Identity=25.5754475703325, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI18699730, Length=396, Percent_Identity=26.2626262626263, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI4759114, Length=441, Percent_Identity=21.5419501133787, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI23503293, Length=396, Percent_Identity=28.5353535353535, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI5730045, Length=388, Percent_Identity=25.5154639175258, Blast_Score=71, Evalue=2e-12,
Organism=Escherichia coli, GI1789969, Length=368, Percent_Identity=25.8152173913043, Blast_Score=91, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17550316, Length=170, Percent_Identity=31.7647058823529, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI115533486, Length=244, Percent_Identity=28.2786885245902, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI115533490, Length=244, Percent_Identity=28.2786885245902, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17568977, Length=232, Percent_Identity=28.8793103448276, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI115533488, Length=244, Percent_Identity=28.2786885245902, Blast_Score=85, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI32567122, Length=180, Percent_Identity=32.2222222222222, Blast_Score=75, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17557434, Length=180, Percent_Identity=32.2222222222222, Blast_Score=75, Evalue=8e-14,
Organism=Saccharomyces cerevisiae, GI6324453, Length=311, Percent_Identity=25.08038585209, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI281360217, Length=198, Percent_Identity=32.3232323232323, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI28573971, Length=198, Percent_Identity=32.3232323232323, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24646367, Length=391, Percent_Identity=25.0639386189258, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI24639306, Length=169, Percent_Identity=32.5443786982249, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI19923028, Length=193, Percent_Identity=31.6062176165803, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24585866, Length=171, Percent_Identity=26.3157894736842, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI161077961, Length=182, Percent_Identity=30.7692307692308, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI281361096, Length=123, Percent_Identity=36.5853658536585, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI19922230, Length=239, Percent_Identity=25.9414225941423, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24653578, Length=239, Percent_Identity=25.9414225941423, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24653581, Length=239, Percent_Identity=25.9414225941423, Blast_Score=69, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24652823, Length=213, Percent_Identity=24.4131455399061, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24653995, Length=187, Percent_Identity=31.0160427807487, Blast_Score=65, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24653997, Length=187, Percent_Identity=31.0160427807487, Blast_Score=65, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42359; Mature: 42228

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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>Mature Secondary Structure 
SGPRASRVFYGWYVVAAAFAVTFVGFGSAYTFSAFVESLQRDFAASRGQISLVFSLAGF
CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LYFGFGIVSGPLADRFGSRRLAVAGMLLTAAGLAAAGAAHTLLQVYVAYGLGVGFGVGCA
HHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVPAVGAVQRWFVRRRGFASGLAVAGIGVGTLVMPPLASALIAHVGWRGAYVTLAAIAVV
HHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
VGAGMSLLIENDPRGRGLLPDGDVARKQAGDALPGAASAVPAGATVREAVASRPFASLYA
HHCCCEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHH
ACLVCSFGVFVPFVHLVPYALDHGVAPSTAVLLLGAIGVGSTAGRFFLGGLADRFGRRAS
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHH
LLAMFAGMAVALVAWAGAGSVATLAAFALVFGVFYGGWVAVLPAVVMDYFGGRNVSAIIG
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
VLYTSVAFGTLIGPAAAGFIYDAGGGYLVPILASAAANAIAFAIVATTGRAPLMARAAGR
HHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHEEEECCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]