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The map label for this gene is ugpQ

Identifier: 115350373

GI number: 115350373

Start: 359283

End: 360047

Strand: Direct

Name: ugpQ

Synonym: Bamb_0318

Alternate gene names: 115350373

Gene position: 359283-360047 (Clockwise)

Preceding gene: 115350372

Following gene: 115350375

Centisome position: 10.1

GC content: 72.29

Gene sequence:

>765_bases
ATGACTTCCCGTACCGACTGGCCCTATCCGCGCGTGGTCGCCCATCGCGGCGGCGGCACGCTCGCGCCGGAGAACACGCT
CGCCGCGCTCGACGAGGGCGCGCGGCGCGGGCACCGGATGGTCGAGTTCGACGCGAAGCTGTCCGCCGACGACGTGACGT
TCCTGCTGCACGACGACACGGTCGAGCGCACGTCGAACGGCAGCGGGCCGGCGGCGGGCATGCGTTATGCGGCACTGGCC
GCGCTCGACGCCGGCGCGTGGTTCGACGCGCGCTTCGCGGGCGAGCGGATGCCGACGCTCGATGCGGCGGCGGCGTGCTG
CATCGCGCACGGGCTCGCCGCGAATGTCGAGATCAAGCCGTGCCCGGGGCGCGAGCGCGAAACCGGGCAGCGCGTGGCAG
CCGACGCGGCTGCGTACTGGCGCGATGCGGCGGTGCCGCCGCTGCTGTCGTCGTTCTCGTTCGATGCGCTGCAACAGGCG
CGCGCGACCGCGCCGGCGCTGCCGCGCGGGATGCTCTACGAAGCCGTGCCGGACGACTGGCACGCCCAGGTGGTCGGAGC
GCTCGGCTGCGTTTCGTTGCATGCAGACCACACACGGCTCGACGAATCGCTCGTGCGCGCGATCAAGGCGGCCGGGCTGC
GCATCCTGGTCTACACGGTCAACGACCTCGAACGGGCGTGCGAACTCGTGCGCTGGGGCGTCGACGCGGTCTGCACGGAC
CGGATCGACCTGATCGGCCCGACGGCACTCGACGACCTCGTATAG

Upstream 100 bases:

>100_bases
GCGCTGGGCGCGGCGCTGCCCGCGCACCGGCTGCATTTCTTCGATCCCGAGACCGGCAAGCGCGCCGGCTGACCCTGACG
AACCTGCTGCGAGGCGCACG

Downstream 100 bases:

>100_bases
CGCCGCGCACCCCGGGCAAAATTCTGTCCGGGAACCTGCGTGACGCGAAAAAACGACGCCCCGGCGGGATTCCCGCCGGG
GCGTTTTGCATCGTGGAGAC

Product: cytoplasmic glycerophosphodiester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MTSRTDWPYPRVVAHRGGGTLAPENTLAALDEGARRGHRMVEFDAKLSADDVTFLLHDDTVERTSNGSGPAAGMRYAALA
ALDAGAWFDARFAGERMPTLDAAAACCIAHGLAANVEIKPCPGRERETGQRVAADAAAYWRDAAVPPLLSSFSFDALQQA
RATAPALPRGMLYEAVPDDWHAQVVGALGCVSLHADHTRLDESLVRAIKAAGLRILVYTVNDLERACELVRWGVDAVCTD
RIDLIGPTALDDLV

Sequences:

>Translated_254_residues
MTSRTDWPYPRVVAHRGGGTLAPENTLAALDEGARRGHRMVEFDAKLSADDVTFLLHDDTVERTSNGSGPAAGMRYAALA
ALDAGAWFDARFAGERMPTLDAAAACCIAHGLAANVEIKPCPGRERETGQRVAADAAAYWRDAAVPPLLSSFSFDALQQA
RATAPALPRGMLYEAVPDDWHAQVVGALGCVSLHADHTRLDESLVRAIKAAGLRILVYTVNDLERACELVRWGVDAVCTD
RIDLIGPTALDDLV
>Mature_253_residues
TSRTDWPYPRVVAHRGGGTLAPENTLAALDEGARRGHRMVEFDAKLSADDVTFLLHDDTVERTSNGSGPAAGMRYAALAA
LDAGAWFDARFAGERMPTLDAAAACCIAHGLAANVEIKPCPGRERETGQRVAADAAAYWRDAAVPPLLSSFSFDALQQAR
ATAPALPRGMLYEAVPDDWHAQVVGALGCVSLHADHTRLDESLVRAIKAAGLRILVYTVNDLERACELVRWGVDAVCTDR
IDLIGPTALDDLV

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=157, Percent_Identity=31.2101910828025, Blast_Score=88, Evalue=1e-17,
Organism=Escherichia coli, GI1789858, Length=244, Percent_Identity=54.9180327868852, Blast_Score=273, Evalue=8e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 27189; Mature: 27058

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRTDWPYPRVVAHRGGGTLAPENTLAALDEGARRGHRMVEFDAKLSADDVTFLLHDDT
CCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCC
VERTSNGSGPAAGMRYAALAALDAGAWFDARFAGERMPTLDAAAACCIAHGLAANVEIKP
HHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEC
CPGRERETGQRVAADAAAYWRDAAVPPLLSSFSFDALQQARATAPALPRGMLYEAVPDDW
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCHHCCCCCH
HAQVVGALGCVSLHADHTRLDESLVRAIKAAGLRILVYTVNDLERACELVRWGVDAVCTD
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCCCHHHHC
RIDLIGPTALDDLV
CHHHCCCHHHHHCC
>Mature Secondary Structure 
TSRTDWPYPRVVAHRGGGTLAPENTLAALDEGARRGHRMVEFDAKLSADDVTFLLHDDT
CCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCC
VERTSNGSGPAAGMRYAALAALDAGAWFDARFAGERMPTLDAAAACCIAHGLAANVEIKP
HHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEC
CPGRERETGQRVAADAAAYWRDAAVPPLLSSFSFDALQQARATAPALPRGMLYEAVPDDW
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHCCCCCCCCCCHHCCCCCH
HAQVVGALGCVSLHADHTRLDESLVRAIKAAGLRILVYTVNDLERACELVRWGVDAVCTD
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCCCHHHHC
RIDLIGPTALDDLV
CHHHCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2541415; 1851953; 8041620; 9278503; 3062310 [H]