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The map label for this gene is yedZ [H]

Identifier: 115350358

GI number: 115350358

Start: 343750

End: 344451

Strand: Direct

Name: yedZ [H]

Synonym: Bamb_0303

Alternate gene names: 115350358

Gene position: 343750-344451 (Clockwise)

Preceding gene: 115350357

Following gene: 115350360

Centisome position: 9.67

GC content: 66.38

Gene sequence:

>702_bases
GTGAGAAACGACATGCCTCCTTCGACACTGGAGCCCGTGCGCACGTCCGGCACGCGCACGGCAGCCGCGGGTAGCGCCCG
GGCCGGCGCCGTGCGTACGACGTCGCCGCGCTGGCTGGTGCCCGCCAAGGTGCTGGTTTTCGCGGCCGGCCTCTATCCGC
TCGCACGACTCGTGCTGTTCGGGCTGACCGACCGGCTCGGTGCGAACCCGATCGAGTTCATCACGCGTTCGACGGGCCTC
TGGACGCTGGTCATGCTCTGCATCACGCTCGCTATCACGCCGCTTCGGCACGTGACGAGCGTTCCCGCGTTGTTGCGTTT
TCGCCGGATGATCGGCCTGTTCGCGTTCTTTTACGCGACGCTGCATTTCACGACGTACCTGTGGTTCGACAAGTGGTTCG
ACGTGCTCGCGATCCTGAAGGATGTCGGCAAGCGTCCGTTCATCACGGTCGGCTTCGTTGCATTCGTGCTGCTGATTCCG
CTGGCCGCGACATCGCCGCGTGCGATGGTGCGCCGGCTCGGCCGTCGCTGGGCTACGCTGCATCGCGCGATCTATGCGAT
CGCGCTGTTCGCCGTGCTGCATTTCTGGTGGATGCGGGCCGGCAAGCACGATCTCGCGCAGCCGAAGCTCTACGCGACGA
TCGTCGCGGTGCTGCTCGGCTGGCGGCTGCTTGCATGGGGCTGGCGGCGCGTCCGTACCTGA

Upstream 100 bases:

>100_bases
TCACGCCGAAGCGCAAGACGCTGATGTTCAACGGCTACGGCGATCTCGTCGCGTCGATGTATCAGGGCATGGATCTGAAA
AAGAATTTCTGAGCGCGACG

Downstream 100 bases:

>100_bases
CGTGGCGGGCCCGAAAAACAAAAGGCGATGACCGGAAGTCATCGCCTTGGGGCGCCAGAGAAACCGCCGCGGCGGCGGCG
CGCGACTACTGCGCGGCGGC

Product: putative sulfite oxidase subunit YedZ

Products: NA

Alternate protein names: Flavocytochrome yedZ [H]

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MRNDMPPSTLEPVRTSGTRTAAAGSARAGAVRTTSPRWLVPAKVLVFAAGLYPLARLVLFGLTDRLGANPIEFITRSTGL
WTLVMLCITLAITPLRHVTSVPALLRFRRMIGLFAFFYATLHFTTYLWFDKWFDVLAILKDVGKRPFITVGFVAFVLLIP
LAATSPRAMVRRLGRRWATLHRAIYAIALFAVLHFWWMRAGKHDLAQPKLYATIVAVLLGWRLLAWGWRRVRT

Sequences:

>Translated_233_residues
MRNDMPPSTLEPVRTSGTRTAAAGSARAGAVRTTSPRWLVPAKVLVFAAGLYPLARLVLFGLTDRLGANPIEFITRSTGL
WTLVMLCITLAITPLRHVTSVPALLRFRRMIGLFAFFYATLHFTTYLWFDKWFDVLAILKDVGKRPFITVGFVAFVLLIP
LAATSPRAMVRRLGRRWATLHRAIYAIALFAVLHFWWMRAGKHDLAQPKLYATIVAVLLGWRLLAWGWRRVRT
>Mature_233_residues
MRNDMPPSTLEPVRTSGTRTAAAGSARAGAVRTTSPRWLVPAKVLVFAAGLYPLARLVLFGLTDRLGANPIEFITRSTGL
WTLVMLCITLAITPLRHVTSVPALLRFRRMIGLFAFFYATLHFTTYLWFDKWFDVLAILKDVGKRPFITVGFVAFVLLIP
LAATSPRAMVRRLGRRWATLHRAIYAIALFAVLHFWWMRAGKHDLAQPKLYATIVAVLLGWRLLAWGWRRVRT

Specific function: Is probably involved in the electron transfer between its heme and the molybdenum cofactor of the reductase catalytic subunit yedY [H]

COG id: COG2717

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedZ family [H]

Homologues:

Organism=Escherichia coli, GI1788283, Length=156, Percent_Identity=41.025641025641, Blast_Score=108, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013130
- InterPro:   IPR022837 [H]

Pfam domain/function: PF01794 Ferric_reduct [H]

EC number: NA

Molecular weight: Translated: 26361; Mature: 26361

Theoretical pI: Translated: 12.34; Mature: 12.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNDMPPSTLEPVRTSGTRTAAAGSARAGAVRTTSPRWLVPAKVLVFAAGLYPLARLVLF
CCCCCCCCCCCHHHCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GLTDRLGANPIEFITRSTGLWTLVMLCITLAITPLRHVTSVPALLRFRRMIGLFAFFYAT
HHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHFTTYLWFDKWFDVLAILKDVGKRPFITVGFVAFVLLIPLAATSPRAMVRRLGRRWATL
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
HRAIYAIALFAVLHFWWMRAGKHDLAQPKLYATIVAVLLGWRLLAWGWRRVRT
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRNDMPPSTLEPVRTSGTRTAAAGSARAGAVRTTSPRWLVPAKVLVFAAGLYPLARLVLF
CCCCCCCCCCCHHHCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
GLTDRLGANPIEFITRSTGLWTLVMLCITLAITPLRHVTSVPALLRFRRMIGLFAFFYAT
HHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHFTTYLWFDKWFDVLAILKDVGKRPFITVGFVAFVLLIPLAATSPRAMVRRLGRRWATL
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
HRAIYAIALFAVLHFWWMRAGKHDLAQPKLYATIVAVLLGWRLLAWGWRRVRT
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA