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The map label for this gene is rpl24p

Identifier: 11499498

GI number: 11499498

Start: 1719711

End: 1720073

Strand: Reverse

Name: rpl24p

Synonym: AF1914

Alternate gene names: 11499498

Gene position: 1720073-1719711 (Counterclockwise)

Preceding gene: 11499499

Following gene: 11499497

Centisome position: 78.96

GC content: 49.59

Gene sequence:

>363_bases
ATGGCAGTTCCCAAATCAAAGCAGCCGAGGAAGCAGAGAAGGTGGCTTTACAAGACGGCCAAGCTTCACGAGAGGCACAA
GCTTCTTCACGCTACTCTATCCAAGGATTTGAGAAAGAAGTACGGAAAGAGGGCAATCAGAGTCAGAAAGGGGGACAAAG
TGAGAATCATGAGGGGTCAGTTTGCCGGACATGAGGGAAGAGTGCTTGAGGTTGACATGAAGAGGTGCAGAATCACGGTT
GATGGCGTTACTGTCACCAAAGCTGACGGGACTGAGGTTGCGGTTCCGATTCATCCGTCAAATGTTATGATCACAGACTT
CGGCGAAGTGGACGAGGTCAGAAAGAAAATCCTTGAGAGGTGA

Upstream 100 bases:

>100_bases
CCTAGGGGCTCGGAAATCAGAGGTGCTGTTGCGAGAGAGGCTGCGGAGCGCTTTAGCAAAATAGGCACCATTGCATCCGT
AATCGTGTGAGGTGGTAAAA

Downstream 100 bases:

>100_bases
TTGAGTTGCATCAGAAGAGACTTTCCGCTCCGAAAACGTACAAAATTCCGAGAAAGGTTTCAAAGTGGGTTGTAAAGCCC
TCACCTGGCCCACATAACAA

Product: 50S ribosomal protein L24P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 119

Protein sequence:

>120_residues
MAVPKSKQPRKQRRWLYKTAKLHERHKLLHATLSKDLRKKYGKRAIRVRKGDKVRIMRGQFAGHEGRVLEVDMKRCRITV
DGVTVTKADGTEVAVPIHPSNVMITDFGEVDEVRKKILER

Sequences:

>Translated_120_residues
MAVPKSKQPRKQRRWLYKTAKLHERHKLLHATLSKDLRKKYGKRAIRVRKGDKVRIMRGQFAGHEGRVLEVDMKRCRITV
DGVTVTKADGTEVAVPIHPSNVMITDFGEVDEVRKKILER
>Mature_119_residues
AVPKSKQPRKQRRWLYKTAKLHERHKLLHATLSKDLRKKYGKRAIRVRKGDKVRIMRGQFAGHEGRVLEVDMKRCRITVD
GVTVTKADGTEVAVPIHPSNVMITDFGEVDEVRKKILER

Specific function: Located at the polypeptide exit tunnel on the outside of the subunit

COG id: COG0198

COG function: function code J; Ribosomal protein L24

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L24P family

Homologues:

Organism=Homo sapiens, GI7705813, Length=112, Percent_Identity=42.8571428571429, Blast_Score=80, Evalue=4e-16,
Organism=Homo sapiens, GI4506621, Length=112, Percent_Identity=42.8571428571429, Blast_Score=80, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17535693, Length=107, Percent_Identity=42.0560747663551, Blast_Score=79, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI32564329, Length=89, Percent_Identity=43.8202247191011, Blast_Score=72, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17535691, Length=89, Percent_Identity=43.8202247191011, Blast_Score=72, Evalue=8e-14,
Organism=Saccharomyces cerevisiae, GI6321471, Length=111, Percent_Identity=38.7387387387387, Blast_Score=77, Evalue=9e-16,
Organism=Saccharomyces cerevisiae, GI6323376, Length=111, Percent_Identity=37.8378378378378, Blast_Score=76, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21357853, Length=118, Percent_Identity=38.135593220339, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL24_ARCFU (O28365)

Other databases:

- EMBL:   AE000782
- PIR:   A69489
- RefSeq:   NP_070739.1
- ProteinModelPortal:   O28365
- SMR:   O28365
- GeneID:   1485137
- GenomeReviews:   AE000782_GR
- KEGG:   afu:AF1914
- NMPDR:   fig|224325.1.peg.1900
- TIGR:   AF_1914
- HOGENOM:   HBG714769
- OMA:   GKHTDES
- ProtClustDB:   PRK01191
- BioCyc:   AFUL224325:AF_1914-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_01326_A
- InterPro:   IPR005824
- InterPro:   IPR005825
- InterPro:   IPR014723
- InterPro:   IPR005756
- InterPro:   IPR008991
- Gene3D:   G3DSA:2.30.30.200
- PANTHER:   PTHR11143
- SMART:   SM00739
- TIGRFAMs:   TIGR01080

Pfam domain/function: PF00467 KOW; SSF50104 Transl_SH3_like

EC number: NA

Molecular weight: Translated: 13925; Mature: 13793

Theoretical pI: Translated: 11.31; Mature: 11.31

Prosite motif: PS01108 RIBOSOMAL_L24

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVPKSKQPRKQRRWLYKTAKLHERHKLLHATLSKDLRKKYGKRAIRVRKGDKVRIMRGQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEECCCEEEEEECC
FAGHEGRVLEVDMKRCRITVDGVTVTKADGTEVAVPIHPSNVMITDFGEVDEVRKKILER
CCCCCCCEEEEECCEEEEEECCEEEEECCCCEEEEEECCCCEEEECCCCHHHHHHHHHCC
>Mature Secondary Structure 
AVPKSKQPRKQRRWLYKTAKLHERHKLLHATLSKDLRKKYGKRAIRVRKGDKVRIMRGQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEECCCEEEEEECC
FAGHEGRVLEVDMKRCRITVDGVTVTKADGTEVAVPIHPSNVMITDFGEVDEVRKKILER
CCCCCCCEEEEECCEEEEEECCEEEEECCCCEEEEEECCCCEEEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475