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The map label for this gene is rpl19e

Identifier: 11499491

GI number: 11499491

Start: 1716534

End: 1716983

Strand: Reverse

Name: rpl19e

Synonym: AF1907

Alternate gene names: 11499491

Gene position: 1716983-1716534 (Counterclockwise)

Preceding gene: 11499492

Following gene: 161511071

Centisome position: 78.82

GC content: 48.67

Gene sequence:

>450_bases
GTGATGGTTATGGATTTGAGTTTACAGCGCAGGCTTGCAGCATCTGTGTTGAAGTGCGGTGAAAACAGAGTGTGGTTTGA
TCCAGCTGCTTTGGAAGATATTGCCACAGCGGCAACAAAGCAGGACATAAGGGAGCTAATTGAGCAGGGTGTGATAAAGA
GAAAGCCCGTAAATGGCGTTAGCAGGGCGAGGATAAACAAGAGAAAGCTCCAGAAGAGAAAGGGCAGGAGAAGAGGTCAC
GGCAGCAGAAAGGGAGCGAAGGGAGCGAGGATGCCAAGAAAGAGAATGTGGATTCTCAGAATCAGAGCTTTAAGGAAAGC
TTTGAGGCAGATGAAGGCTGAGGGCGTTGTGGACAGGAGAACTTACAGAATCCTTTACAGAAAGGCGAAGGGTGGAGAGT
TCAGGAGCGTTGCCCACCTTAAGATTTATGTTGAGCAGATGAAGAGGTGA

Upstream 100 bases:

>100_bases
GACAGGCTGTGAGAATCGCCTCATGCGTTGGCATGAAGAAGAGGCTTGCGATTGAGGATAAGGCCAAGGAGCTTGGAATT
AAAGTTCTCAATCCGTCAGG

Downstream 100 bases:

>100_bases
TGAAGTTGGCAAGAGGTCCGAGATACAAGGTTCCCCTCAGGAGAAGAAGAGAGGGTAAGACGAACTACAGGAAAAGACTT
AAGCTGCTCCTTTCAAGGAA

Product: 50S ribosomal protein L19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MMVMDLSLQRRLAASVLKCGENRVWFDPAALEDIATAATKQDIRELIEQGVIKRKPVNGVSRARINKRKLQKRKGRRRGH
GSRKGAKGARMPRKRMWILRIRALRKALRQMKAEGVVDRRTYRILYRKAKGGEFRSVAHLKIYVEQMKR

Sequences:

>Translated_149_residues
MMVMDLSLQRRLAASVLKCGENRVWFDPAALEDIATAATKQDIRELIEQGVIKRKPVNGVSRARINKRKLQKRKGRRRGH
GSRKGAKGARMPRKRMWILRIRALRKALRQMKAEGVVDRRTYRILYRKAKGGEFRSVAHLKIYVEQMKR
>Mature_149_residues
MMVMDLSLQRRLAASVLKCGENRVWFDPAALEDIATAATKQDIRELIEQGVIKRKPVNGVSRARINKRKLQKRKGRRRGH
GSRKGAKGARMPRKRMWILRIRALRKALRQMKAEGVVDRRTYRILYRKAKGGEFRSVAHLKIYVEQMKR

Specific function: Unknown

COG id: COG2147

COG function: function code J; Ribosomal protein L19E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L19e family

Homologues:

Organism=Homo sapiens, GI4506609, Length=143, Percent_Identity=46.8531468531469, Blast_Score=112, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17508673, Length=125, Percent_Identity=45.6, Blast_Score=112, Evalue=9e-26,
Organism=Saccharomyces cerevisiae, GI6319559, Length=145, Percent_Identity=37.9310344827586, Blast_Score=96, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6319444, Length=145, Percent_Identity=37.9310344827586, Blast_Score=96, Evalue=2e-21,
Organism=Drosophila melanogaster, GI45552831, Length=144, Percent_Identity=44.4444444444444, Blast_Score=122, Evalue=1e-28,
Organism=Drosophila melanogaster, GI17136322, Length=144, Percent_Identity=44.4444444444444, Blast_Score=122, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL19_ARCFU (O28372)

Other databases:

- EMBL:   AE000782
- PIR:   B69488
- RefSeq:   NP_070732.1
- ProteinModelPortal:   O28372
- SMR:   O28372
- GeneID:   1485130
- GenomeReviews:   AE000782_GR
- KEGG:   afu:AF1907
- NMPDR:   fig|224325.1.peg.1893
- TIGR:   AF_1907
- HOGENOM:   HBG748852
- OMA:   MAKGGAF
- ProtClustDB:   PRK08570
- BioCyc:   AFUL224325:AF_1907-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- InterPro:   IPR000196
- InterPro:   IPR015972
- InterPro:   IPR015973
- InterPro:   IPR015974
- Gene3D:   G3DSA:1.10.1650.10
- Gene3D:   G3DSA:1.20.5.560
- Gene3D:   G3DSA:1.10.1200.60

Pfam domain/function: PF01280 Ribosomal_L19e; SSF48140 Ribosomal_L19/L19e

EC number: NA

Molecular weight: Translated: 17392; Mature: 17392

Theoretical pI: Translated: 12.27; Mature: 12.27

Prosite motif: PS00526 RIBOSOMAL_L19E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVMDLSLQRRLAASVLKCGENRVWFDPAALEDIATAATKQDIRELIEQGVIKRKPVNGV
CEEECHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
SRARINKRKLQKRKGRRRGHGSRKGAKGARMPRKRMWILRIRALRKALRQMKAEGVVDRR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH
TYRILYRKAKGGEFRSVAHLKIYVEQMKR
HHHHHHHHCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMVMDLSLQRRLAASVLKCGENRVWFDPAALEDIATAATKQDIRELIEQGVIKRKPVNGV
CEEECHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
SRARINKRKLQKRKGRRRGHGSRKGAKGARMPRKRMWILRIRALRKALRQMKAEGVVDRR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH
TYRILYRKAKGGEFRSVAHLKIYVEQMKR
HHHHHHHHCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475