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Identifier: 11499315

GI number: 11499315

Start: 1549208

End: 1550068

Strand: Reverse

Name: Not Available

Synonym: AF1726

Alternate gene names: NA

Gene position: 1550068-1549208 (Counterclockwise)

Preceding gene: 11499319

Following gene: 11499314

Centisome position: 71.16

GC content: 47.39

Gene sequence:

>861_bases
ATGTTTTTACACGATACATATTTGATACTCATATTTGTATTCAAATTTATCATGTTAATGGAGAAAAGTGTTTTTTACCG
AGCGCGCTTAAGATTGAGCATGAGGGCGACATGGAAGGGTAGCATATCCTTTGGCCTCGTGAACATACCGGTGAAGGTTT
ACAAAGCAACAACGCAGAAGGAGATTCAATTTCACCTCCTTCATTCTGCTGATGGGGGCAGGATCAGATACAGAAAAGTC
TGCGAGAAGTGCGGAAAGGAGGTTTCAGACGGAGAAATCGTCAAAGGATACGAAATATCGAAAAATGAGTATGTGATTCT
AACCGACGAAGACTTTGAGAAGATTCCCCTAAAATCGACGAAAAGCATAGAGATAAGGCAGTTTTTCGACCCTGCAGAGC
TTGGACTGATTTACTACAGCAGCTTTTACTACATATCACCAGACAAGGGAGGAGAAAAGGCCTACTACCTGCTGAAGAAA
GCTATGGAGGAGACAAACAGCATGGGGATAGGAAAGATGACCATGCGCGGAAAGGAGAACCTCGTGGCTCTAAGACCCTA
CGACGGTGGGATAGTTCTGGCTCAGCTGCACTACATCGACGAGGTCCGCAGCCCTCTGGAGCTTCCCGGCTGGGGCGCTG
TGGCGGAAATCACCGAAGAGGAGCTTGAACTCGCCAAAAAGCTCATCCTTGCCATGAAGAAACCGCTGAAGCTGGAGGAG
TTCAGAGACGAGTACAAGGAGGCGCTGATGCAGCTGATTGAGGCGAAGCTCTCCGGCAGAGAGATTGTTGTCAGCGAGGG
AGTTGAAGAGGTTAAATCGCTGATTGATGCGTTGAAAGCCAGTCTTGAGGCAGTCAAATGA

Upstream 100 bases:

>100_bases
TTTCCCCCATAAAAAGCGTGCCATTTCTTTGCCCTTCCGTTCTGGGTCAATTCAAACACCTCTTCAATCATACAAATCTT
ATACGTACTATAGTACTTAA

Downstream 100 bases:

>100_bases
GCTGGTTCGATAAAAAAATCAAGCCGATGCTTGCTGTCAGGTCAAAGCCCTTCAGCAGCGACGACCACATTTACGAGGTT
AAGTGGGATGGAACGAGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MFLHDTYLILIFVFKFIMLMEKSVFYRARLRLSMRATWKGSISFGLVNIPVKVYKATTQKEIQFHLLHSADGGRIRYRKV
CEKCGKEVSDGEIVKGYEISKNEYVILTDEDFEKIPLKSTKSIEIRQFFDPAELGLIYYSSFYYISPDKGGEKAYYLLKK
AMEETNSMGIGKMTMRGKENLVALRPYDGGIVLAQLHYIDEVRSPLELPGWGAVAEITEEELELAKKLILAMKKPLKLEE
FRDEYKEALMQLIEAKLSGREIVVSEGVEEVKSLIDALKASLEAVK

Sequences:

>Translated_286_residues
MFLHDTYLILIFVFKFIMLMEKSVFYRARLRLSMRATWKGSISFGLVNIPVKVYKATTQKEIQFHLLHSADGGRIRYRKV
CEKCGKEVSDGEIVKGYEISKNEYVILTDEDFEKIPLKSTKSIEIRQFFDPAELGLIYYSSFYYISPDKGGEKAYYLLKK
AMEETNSMGIGKMTMRGKENLVALRPYDGGIVLAQLHYIDEVRSPLELPGWGAVAEITEEELELAKKLILAMKKPLKLEE
FRDEYKEALMQLIEAKLSGREIVVSEGVEEVKSLIDALKASLEAVK
>Mature_286_residues
MFLHDTYLILIFVFKFIMLMEKSVFYRARLRLSMRATWKGSISFGLVNIPVKVYKATTQKEIQFHLLHSADGGRIRYRKV
CEKCGKEVSDGEIVKGYEISKNEYVILTDEDFEKIPLKSTKSIEIRQFFDPAELGLIYYSSFYYISPDKGGEKAYYLLKK
AMEETNSMGIGKMTMRGKENLVALRPYDGGIVLAQLHYIDEVRSPLELPGWGAVAEITEEELELAKKLILAMKKPLKLEE
FRDEYKEALMQLIEAKLSGREIVVSEGVEEVKSLIDALKASLEAVK

Specific function: Could be involved in DNA repair [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 32781; Mature: 32781

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLHDTYLILIFVFKFIMLMEKSVFYRARLRLSMRATWKGSISFGLVNIPVKVYKATTQK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCEEEEEEECCEEEEECCCHH
EIQFHLLHSADGGRIRYRKVCEKCGKEVSDGEIVKGYEISKNEYVILTDEDFEKIPLKST
CEEEEEEECCCCCEEHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCC
KSIEIRQFFDPAELGLIYYSSFYYISPDKGGEKAYYLLKKAMEETNSMGIGKMTMRGKEN
CCEEHHHCCCHHHHCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCC
LVALRPYDGGIVLAQLHYIDEVRSPLELPGWGAVAEITEEELELAKKLILAMKKPLKLEE
EEEECCCCCCEEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
FRDEYKEALMQLIEAKLSGREIVVSEGVEEVKSLIDALKASLEAVK
HHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFLHDTYLILIFVFKFIMLMEKSVFYRARLRLSMRATWKGSISFGLVNIPVKVYKATTQK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCEEEEEEECCEEEEECCCHH
EIQFHLLHSADGGRIRYRKVCEKCGKEVSDGEIVKGYEISKNEYVILTDEDFEKIPLKST
CEEEEEEECCCCCEEHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEEECCCCCCCCCCCC
KSIEIRQFFDPAELGLIYYSSFYYISPDKGGEKAYYLLKKAMEETNSMGIGKMTMRGKEN
CCEEHHHCCCHHHHCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCC
LVALRPYDGGIVLAQLHYIDEVRSPLELPGWGAVAEITEEELELAKKLILAMKKPLKLEE
EEEECCCCCCEEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHH
FRDEYKEALMQLIEAKLSGREIVVSEGVEEVKSLIDALKASLEAVK
HHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]